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2AL1
Asym. Unit
Info
Asym.Unit (152 KB)
Biol.Unit 1 (147 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF ENOLASE MG SUBUNIT COMPLEX AT PH 8.0
Authors
:
P. A. Sims, A. L. Menefee, T. M. Larsen, S. O. Mansoorabadi, G. H. Reed
Date
:
04 Aug 05 (Deposition) - 24 Jan 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Beta Barrel, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. A. Sims, A. L. Menefee, T. M. Larsen, S. O. Mansoorabadi, G. H. Reed
Structure And Catalytic Properties Of An Engineered Heterodimer Of Enolase Composed Of One Active And One Inactive Subunit
J. Mol. Biol. V. 355 422 2006
(for further references see the
PDB file header
)
[
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Hetero Components
(5, 10)
Info
All Hetero Components
1a: 2-PHOSPHOGLYCERIC ACID (2PGa)
2a: CHLORIDE ION (CLa)
3a: POTASSIUM ION (Ka)
3b: POTASSIUM ION (Kb)
4a: MAGNESIUM ION (MGa)
4b: MAGNESIUM ION (MGb)
4c: MAGNESIUM ION (MGc)
4d: MAGNESIUM ION (MGd)
5a: PHOSPHOENOLPYRUVATE (PEPa)
5b: PHOSPHOENOLPYRUVATE (PEPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
2PG
1
Ligand/Ion
2-PHOSPHOGLYCERIC ACID
2
CL
1
Ligand/Ion
CHLORIDE ION
3
K
2
Ligand/Ion
POTASSIUM ION
4
MG
4
Ligand/Ion
MAGNESIUM ION
5
PEP
2
Ligand/Ion
PHOSPHOENOLPYRUVATE
[
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]
Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:246 , GLU A:295 , ASP A:320 , PEP A:440 , 2PG A:441 , HOH A:1003
BINDING SITE FOR RESIDUE MG A 438
02
AC2
SOFTWARE
SER A:39 , ASP A:320 , ASP A:321 , LYS A:345 , PEP A:440 , 2PG A:441 , HOH A:1001 , HOH A:1002
BINDING SITE FOR RESIDUE MG A 439
03
AC3
SOFTWARE
ASP B:246 , GLU B:295 , ASP B:320 , PEP B:440 , HOH B:1018
BINDING SITE FOR RESIDUE MG B 438
04
AC4
SOFTWARE
SER B:39 , PEP B:440 , HOH B:1631 , HOH B:1632
BINDING SITE FOR RESIDUE MG B 439
05
AC5
SOFTWARE
GLY B:366 , HIS B:432 , LYS B:435
BINDING SITE FOR RESIDUE CL B 950
06
AC6
SOFTWARE
PHE B:310 , LYS B:311 , ALA B:313 , HOH B:1053
BINDING SITE FOR RESIDUE K B 960
07
AC7
SOFTWARE
SER B:95 , HOH B:1226 , HOH B:1684
BINDING SITE FOR RESIDUE K B 961
08
AC8
SOFTWARE
GLY A:37 , ALA A:38 , SER A:39 , HIS A:159 , GLN A:167 , GLU A:168 , GLU A:211 , ASP A:246 , GLU A:295 , ASP A:320 , LEU A:343 , LYS A:345 , HIS A:373 , ARG A:374 , SER A:375 , LYS A:396 , MG A:438 , MG A:439 , HOH A:1001 , HOH A:1002 , HOH A:1003
BINDING SITE FOR RESIDUE PEP A 440
09
AC9
SOFTWARE
GLY A:37 , ALA A:38 , SER A:39 , HIS A:159 , GLN A:167 , GLU A:168 , GLU A:211 , ASP A:246 , GLU A:295 , ASP A:320 , LEU A:343 , LYS A:345 , HIS A:373 , ARG A:374 , SER A:375 , LYS A:396 , MG A:438 , MG A:439
BINDING SITE FOR RESIDUE 2PG A 441
10
BC1
SOFTWARE
GLY B:37 , ALA B:38 , SER B:39 , GLN B:167 , GLU B:168 , ASP B:246 , GLU B:295 , ASP B:320 , LEU B:343 , LYS B:345 , HIS B:373 , ARG B:374 , SER B:375 , LYS B:396 , MG B:438 , MG B:439 , HOH B:1631 , HOH B:1632
BINDING SITE FOR RESIDUE PEP B 440
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: ENOLASE (A:342-355,B:342-355)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ENOLASE
PS00164
Enolase signature.
ENO1_YEAST
343-356
2
A:342-355
B:342-355
[
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]
Exons
(1, 2)
Info
All Exons
Exon 1.1 (A:1-436 | B:1-436 (gaps))
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YGR254W
1
YGR254W.1
VII:1000932-1002245
1314
ENO1_YEAST
1-437
437
2
A:1-436
B:1-436 (gaps)
436
436
[
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]
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2al1a2 (A:1-141)
1b: SCOP_d2al1b2 (B:1-141)
2a: SCOP_d2al1a1 (A:142-436)
2b: SCOP_d2al1b1 (B:142-436)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Enolase N-terminal domain-like
(211)
Superfamily
:
Enolase N-terminal domain-like
(211)
Family
:
Enolase N-terminal domain-like
(88)
Protein domain
:
Enolase
(39)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(16)
1a
d2al1a2
A:1-141
1b
d2al1b2
B:1-141
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Enolase C-terminal domain-like
(212)
Family
:
Enolase
(45)
Protein domain
:
Enolase
(39)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(16)
2a
d2al1a1
A:142-436
2b
d2al1b1
B:142-436
[
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]
CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2al1A01 (A:1-126)
1b: CATH_2al1B01 (B:1-126)
2a: CATH_2al1B02 (B:127-436)
2b: CATH_2al1A02 (A:127-436)
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(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Enolase-like; domain 1
(252)
Homologous Superfamily
:
Enolase-like, N-terminal domain
(130)
Baker's yeast (Saccharomyces cerevisiae)
(16)
1a
2al1A01
A:1-126
1b
2al1B01
B:1-126
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Enolase superfamily
(142)
Baker's yeast (Saccharomyces cerevisiae)
(16)
2a
2al1B02
B:127-436
2b
2al1A02
A:127-436
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
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set fontsize 20
set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (152 KB)
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