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2AC1
Asym. Unit
Info
Asym.Unit (105 KB)
Biol.Unit 1 (100 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A CELL-WALL INVERTASE FROM ARABIDOPSIS THALIANA
Authors
:
M. Verhaest, K. Le Roy, C. De Ranter, A. Van Laere, W. Van Den Ende, A
Date
:
18 Jul 05 (Deposition) - 29 Aug 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Five Fold Beta Propeller, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Verhaest, W. Lammens, K. Le Roy, B. De Coninck, C. J. De Ranter, A. Van Laere, W. Van Den Ende, A. Rabijns
X-Ray Diffraction Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana.
Acta Crystallogr. , Sect. D V. 62 1555 2006
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Hetero Components
(3, 14)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
2a: ALPHA-D-MANNOSE (MANa)
2b: ALPHA-D-MANNOSE (MANb)
2c: ALPHA-D-MANNOSE (MANc)
2d: ALPHA-D-MANNOSE (MANd)
2e: ALPHA-D-MANNOSE (MANe)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
3d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3e: N-ACETYL-D-GLUCOSAMINE (NAGe)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
4
Ligand/Ion
GLYCEROL
2
MAN
5
Ligand/Ion
ALPHA-D-MANNOSE
3
NAG
5
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:242 , LYS A:277 , ASN A:299 , GLU A:300 , SER A:301 , ASP A:461 , NAG A:751 , HOH A:1001 , HOH A:1043 , HOH A:1066 , HOH A:1083
BINDING SITE FOR RESIDUE NAG A 750
02
AC2
SOFTWARE
ASP A:461 , THR A:463 , TYR A:522 , NAG A:750 , MAN A:752 , MAN A:758 , HOH A:1023 , HOH A:1066 , HOH A:1099
BINDING SITE FOR RESIDUE NAG A 751
03
AC3
SOFTWARE
THR A:463 , NAG A:751 , MAN A:753 , MAN A:754
BINDING SITE FOR RESIDUE MAN A 752
04
AC4
SOFTWARE
GLN A:396 , SER A:400 , MAN A:752 , MAN A:759 , HOH A:1124 , HOH A:1371
BINDING SITE FOR RESIDUE MAN A 753
05
AC5
SOFTWARE
LYS A:384 , MAN A:752 , MAN A:758
BINDING SITE FOR RESIDUE MAN A 754
06
AC6
SOFTWARE
TYR A:522 , GLN A:523 , NAG A:751 , MAN A:754 , HOH A:1350
BINDING SITE FOR RESIDUE MAN A 758
07
AC7
SOFTWARE
LYS A:401 , MAN A:753 , HOH A:1244
BINDING SITE FOR RESIDUE MAN A 759
08
AC8
SOFTWARE
ASN A:116 , SER A:118 , ASP A:119 , ARG A:123
BINDING SITE FOR RESIDUE NAG A 770
09
AC9
SOFTWARE
ASN A:143 , SER A:145 , SER A:146 , LYS A:168 , ILE A:169 , HIS A:170 , NAG A:791 , HOH A:1257
BINDING SITE FOR RESIDUE NAG A 790
10
BC1
SOFTWARE
NAG A:790 , HOH A:1362
BINDING SITE FOR RESIDUE NAG A 791
11
BC2
SOFTWARE
ASN A:22 , ASP A:23 , GLN A:39 , TRP A:47 , TRP A:82 , SER A:83 , ASP A:149 , GLU A:203
BINDING SITE FOR RESIDUE GOL A 1760
12
BC3
SOFTWARE
TRP A:47 , TRP A:82
BINDING SITE FOR RESIDUE GOL A 1761
13
BC4
SOFTWARE
LEU A:117 , SER A:118 , GLY A:214 , SER A:215 , ASN A:216 , HOH A:1292
BINDING SITE FOR RESIDUE GOL A 1762
14
BC5
SOFTWARE
TRP A:334 , ARG A:337 , GLU A:340 , ARG A:343 , GLU A:374 , TRP A:533 , HOH A:1370
BINDING SITE FOR RESIDUE GOL A 1763
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: GLYCOSYL_HYDROL_F32 (A:13-26)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLYCOSYL_HYDROL_F32
PS00609
Glycosyl hydrolases family 32 active site.
INV1_ARATH
56-69
1
A:13-26
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Exons
(0, 0)
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All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2ac1A02 (A:344-535)
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Classes
(
)
(
)
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)
(
)
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
Exo-inulinase; domain 1
(13)
Thale cress (Arabidopsis thaliana)
(5)
1a
2ac1A02
A:344-535
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Pfam Domains
(0, 0)
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all PFAM domains
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Chain A
Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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