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2ABW
Biol. Unit 2
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Asym.Unit (90 KB)
Biol.Unit 1 (42 KB)
Biol.Unit 2 (45 KB)
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(1)
Title
:
GLUTAMINASE SUBUNIT OF THE PLASMODIAL PLP SYNTHASE (VITAMIN B6 BIOSYNTHESIS)
Authors
:
M. Gengenbacher, T. B. Fitzpatrick, T. Raschle, K. Flicker, I. Sinning S. Mueller, P. Macheroux, I. Tews, B. Kappes
Date
:
17 Jul 05 (Deposition) - 10 Jan 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.62
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Glutaminase, Plp-Synthase, Vitamin B6, Malaria, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Gengenbacher, T. B. Fitzpatrick, T. Raschle, K. Flicker, I. Sinning, S. Mueller, P. Macheroux, I. Tews, B. Kappes
Vitamin B6 Biosynthesis By The Malaria Parasite Plasmodium Falciparum: Biochemical And Structural Insights
J. Biol. Chem. V. 281 3633 2006
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Hetero Components
(0, 0)
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1a: TETRAETHYLENE GLYCOL (PG4a)
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:136 , THR A:171 , SER A:173 , ASN A:180 , HOH A:1164 , LEU B:11
BINDING SITE FOR RESIDUE PG4 A 1101
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 2)
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1: PDXT_SNO_2 (B:5-214)
2: PDXT_SNO_1 (B:46-56)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDXT_SNO_2
PS51130
PdxT/SNO family profile.
PDX2_PLAF7
5-214
1
-
B:5-214
2
PDXT_SNO_1
PS01236
PdxT/SNO family family signature.
PDX2_PLAF7
46-56
1
-
B:46-56
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d2abwb_ (B:)
2a: SCOP_d2abwa1 (A:2-219)
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Protein Domains
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)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
Class I glutamine amidotransferase-like
(173)
Family
:
automated matches
(40)
Protein domain
:
automated matches
(40)
Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
(1)
1a
d2abwb_
B:
Family
:
Class I glutamine amidotransferases (GAT)
(48)
Protein domain
:
Pyridoxine biosynthesis protein 2, Pdx2
(1)
Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
(1)
2a
d2abwa1
A:2-219
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_2abwA00 (A:2-221)
1b: CATH_2abwB00 (B:2-227)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.880, no name defined]
(97)
Malaria parasite p (Plasmodium falciparum)
(1)
1a
2abwA00
A:2-221
1b
2abwB00
B:2-227
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (90 KB)
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