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Asym. Unit
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Asym.Unit (82 KB)
Biol.Unit 1 (77 KB)
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(1)
Title
:
STUDIES ON LIGAND BINDING AND ENZYME INHIBITION OF PLASMODIUM FALCIPARUM GLUTATHIONE S-TRANSFERASE
Authors
:
N. Hiller, K. Fritz-Wolf, M. Deponte, W. Wende, H. Zimmermann, K. Becke
Date
:
14 Jul 05 (Deposition) - 10 Jan 06 (Release) - 10 Jun 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,C
Biol. Unit 1: A,C (1x)
Keywords
:
Malarial, Plasmodium Falciparum, Glutathione S-Transferase, S- Hexylglutathione, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Hiller, K. Fritz-Wolf, M. Deponte, W. Wende, H. Zimmermann, K. Becker
Plasmodium Falciparum Glutathione S-Transferase--Structural And Mechanistic Studies On Ligand Binding And Enzyme Inhibition.
Protein Sci. V. 15 281 2006
(for further references see the
PDB file header
)
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: L-TREITOL (DTLa)
2a: S-HEXYLGLUTATHIONE (GTXa)
2b: S-HEXYLGLUTATHIONE (GTXb)
3a: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20... (P33a)
3b: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20... (P33b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
DTL
1
Ligand/Ion
L-TREITOL
2
GTX
2
Ligand/Ion
S-HEXYLGLUTATHIONE
3
P33
2
Ligand/Ion
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:9 , LYS A:15 , PHE A:45 , GLN A:58 , VAL A:59 , GLN A:71 , SER A:72 , PHE A:116 , TYR A:211 , P33 A:222 , HOH A:223 , HOH A:260 , HOH A:263 , HOH A:266 , PHE C:42 , LYS C:46 , ASP C:105
BINDING SITE FOR RESIDUE GTX A 220
2
AC2
SOFTWARE
PHE A:42 , ASP A:105 , TYR C:9 , LYS C:15 , GLN C:58 , VAL C:59 , GLN C:71 , SER C:72 , TYR C:211 , P33 C:223 , HOH C:232 , HOH C:239 , HOH C:263
BINDING SITE FOR RESIDUE GTX C 221
3
AC3
SOFTWARE
GLY A:14 , LYS A:15 , GLN A:104 , HIS A:107 , TYR A:108 , ASN A:111 , GTX A:220 , TYR C:108 , P33 C:223 , HOH C:295
BINDING SITE FOR RESIDUE P33 A 222
4
AC4
SOFTWARE
P33 A:222 , GLY C:14 , LYS C:15 , GLN C:104 , HIS C:107 , ASN C:111 , GTX C:221 , HOH C:263
BINDING SITE FOR RESIDUE P33 C 223
5
AC5
SOFTWARE
HOH A:300 , LEU C:26 , HOH C:306
BINDING SITE FOR RESIDUE DTL C 224
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GST_NTER (A:3-87,C:3-87)
2: GST_CTER (A:89-211,C:89-211)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_NTER
PS50404
Soluble glutathione S-transferase N-terminal domain profile.
GST_PLAFA
3-87
2
A:3-87
C:3-87
2
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GST_PLAFA
89-211
2
A:89-211
C:89-211
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2aawa1 (A:86-211)
1b: SCOP_d2aawc1 (C:86-211)
2a: SCOP_d2aawa2 (A:1-85)
2b: SCOP_d2aawc2 (C:1-85)
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Protein Domains
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
automated matches
(50)
Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
(3)
1a
d2aawa1
A:86-211
1b
d2aawc1
C:86-211
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
automated matches
(7)
Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
(3)
2a
d2aawa2
A:1-85
2b
d2aawc2
C:1-85
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2aawA01 (A:1-85)
1b: CATH_2aawC01 (C:1-85)
2a: CATH_2aawA02 (A:86-211)
2b: CATH_2aawC02 (C:86-211)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Malaria parasite p (Plasmodium falciparum)
(3)
1a
2aawA01
A:1-85
1b
2aawC01
C:1-85
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
Malaria parasite p (Plasmodium falciparum)
(3)
2a
2aawA02
A:86-211
2b
2aawC02
C:86-211
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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