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2A78
Asym. Unit
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Asym.Unit (73 KB)
Biol.Unit 1 (68 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE C3BOT-RALA COMPLEX REVEALS A NOVEL TYPE OF ACTION OF A BACTERIAL EXOENZYME
Authors
:
A. Pautsch, M. Vogelsgesang, J. Trankle, C. Herrmann, K. Aktories
Date
:
05 Jul 05 (Deposition) - 11 Oct 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.81
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Exoenzyme C3, Bacterial Adp-Ribosyltransferase, Ral, Rho, Gdp- Binding, Protein Binding-Transferase Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Pautsch, M. Vogelsgesang, J. Trankle, C. Herrmann, K. Aktories
Crystal Structure Of The C3Bot-Rala Complex Reveals A Novel Type Of Action Of A Bacterial Exoenzyme.
Embo J. V. 24 3670 2005
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
2a: MAGNESIUM ION (MGa)
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Label:
No.
Name
Count
Type
Full Name
1
GDP
1
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
2
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:28 , GDP A:500 , HOH A:501 , HOH A:517 , HOH A:653 , HOH A:657
BINDING SITE FOR RESIDUE MG A 400
2
AC2
SOFTWARE
GLY A:24 , VAL A:25 , GLY A:26 , LYS A:27 , SER A:28 , ALA A:29 , GLU A:41 , ASP A:42 , ASN A:127 , LYS A:128 , ASP A:130 , LEU A:131 , SER A:157 , ALA A:158 , LYS A:159 , MG A:400 , HOH A:501 , HOH A:506 , HOH A:513 , HOH A:517 , HOH A:537 , HOH A:559 , HOH A:653
BINDING SITE FOR RESIDUE GDP A 500
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(4, 4)
Info
All Exons
Exon 1.3a (A:13-38)
Exon 1.4b (A:39-108)
Exon 1.5 (A:108-166)
Exon 1.8d (A:167-182)
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1: Boundary 1.1a/1.3a
2: Boundary 1.3a/1.4b
3: Boundary 1.4b/1.5
4: Boundary 1.5/1.8d
5: Boundary 1.8d/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000005257
1a
ENSE00001829077
chr7:
39663082-39663424
343
RALA_HUMAN
-
0
0
-
-
1.3a
ENST00000005257
3a
ENSE00000832451
chr7:
39726230-39726380
151
RALA_HUMAN
1-38
38
1
A:13-38
26
1.4b
ENST00000005257
4b
ENSE00000679279
chr7:
39729981-39730189
209
RALA_HUMAN
39-108
70
1
A:39-108
70
1.5
ENST00000005257
5
ENSE00000679282
chr7:
39736284-39736458
175
RALA_HUMAN
108-166
59
1
A:108-166
59
1.8d
ENST00000005257
8d
ENSE00001270055
chr7:
39745722-39747723
2002
RALA_HUMAN
167-206
40
1
A:167-182
16
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d2a78b_ (B:)
2a: SCOP_d2a78a_ (A:)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ADP-ribosylation
(157)
Superfamily
:
ADP-ribosylation
(157)
Family
:
ADP-ribosylating toxins
(85)
Protein domain
:
Exoenzyme c3
(11)
Clostridium botulinum [TaxId: 1491]
(6)
1a
d2a78b_
B:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Ras-related protein RalA
(8)
Human (Homo sapiens) [TaxId: 9606]
(5)
2a
d2a78a_
A:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_2a78A00 (A:13-182)
2a: CATH_2a78B00 (B:45-251)
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
2a78A00
A:13-182
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Toxin ADP-ribosyltransferase; Chain A, domain 1
(46)
Homologous Superfamily
:
Toxin ADP-ribosyltransferase; Chain A, domain 1
(46)
Human (Homo sapiens)
(3)
2a
2a78B00
B:45-251
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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