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2A3W
Asym. Unit
Info
Asym.Unit (734 KB)
Biol.Unit 1 (368 KB)
Biol.Unit 2 (360 KB)
Biol.Unit 3 (187 KB)
Biol.Unit 4 (194 KB)
Biol.Unit 5 (188 KB)
Biol.Unit 6 (187 KB)
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Title
:
DECAMERIC STRUCTURE OF HUMAN SERUM AMYLOID P-COMPONENT BOUND TO BIS-1, 2-{[(Z)-2-CARBOXY-2-METHYL-1,3-DIOXANE]-5-YLOXYCARBAMOYL}-ETHANE
Authors
:
J. G. Ho, P. I. Kitov, E. Paszkiewicz, J. Sadowska, D. R. Bundle, K. K. Ng
Date
:
27 Jun 05 (Deposition) - 26 Jul 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J (1x)
Biol. Unit 2: K,L,M,N,O,P,Q,R,S,T (1x)
Biol. Unit 3: K,L,M,N,O (1x)
Biol. Unit 4: A,B,C,D,E (1x)
Biol. Unit 5: F,G,H,I,J (1x)
Biol. Unit 6: P,Q,R,S,T (1x)
Keywords
:
Multivalent Ligand Complex, Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. G. Ho, P. I. Kitov, E. Paszkiewicz, J. Sadowska, D. R. Bundle, K. K. Ng
Ligand-Assisted Aggregation Of Proteins: Dimerization Of Serum Amyloid P Component By Bivalent Ligands.
J. Biol. Chem. V. 280 31999 2005
[
close entry info
]
Hetero Components
(2, 50)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1aa: CALCIUM ION (CAaa)
1ab: CALCIUM ION (CAab)
1ac: CALCIUM ION (CAac)
1ad: CALCIUM ION (CAad)
1ae: CALCIUM ION (CAae)
1af: CALCIUM ION (CAaf)
1ag: CALCIUM ION (CAag)
1ah: CALCIUM ION (CAah)
1ai: CALCIUM ION (CAai)
1aj: CALCIUM ION (CAaj)
1ak: CALCIUM ION (CAak)
1al: CALCIUM ION (CAal)
1am: CALCIUM ION (CAam)
1an: CALCIUM ION (CAan)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
1k: CALCIUM ION (CAk)
1l: CALCIUM ION (CAl)
1m: CALCIUM ION (CAm)
1n: CALCIUM ION (CAn)
1o: CALCIUM ION (CAo)
1p: CALCIUM ION (CAp)
1q: CALCIUM ION (CAq)
1r: CALCIUM ION (CAr)
1s: CALCIUM ION (CAs)
1t: CALCIUM ION (CAt)
1u: CALCIUM ION (CAu)
1v: CALCIUM ION (CAv)
1w: CALCIUM ION (CAw)
1x: CALCIUM ION (CAx)
1y: CALCIUM ION (CAy)
1z: CALCIUM ION (CAz)
2a: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJa)
2b: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJb)
2c: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJc)
2d: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJd)
2e: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJe)
2f: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJf)
2g: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJg)
2h: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJh)
2i: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJi)
2j: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1... (CPJj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
40
Ligand/Ion
CALCIUM ION
2
CPJ
10
Ligand/Ion
BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1,3-DIOXANE]-5-YLOXYCARBAMOYL}-ETHANE
[
close Hetero Component info
]
Sites
(50, 50)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:136 , ASP A:138 , GLN A:148 , CPJ A:341 , HOH A:638 , HOH A:639
BINDING SITE FOR RESIDUE CA A 301
02
AC2
SOFTWARE
ASP A:58 , ASN A:59 , GLU A:136 , GLN A:137 , ASP A:138 , CPJ A:341
BINDING SITE FOR RESIDUE CA A 302
03
AC3
SOFTWARE
GLU B:136 , ASP B:138 , GLN B:148 , CPJ B:342 , HOH B:648 , HOH B:649
BINDING SITE FOR RESIDUE CA B 303
04
AC4
SOFTWARE
ASP B:58 , ASN B:59 , GLU B:136 , GLN B:137 , ASP B:138 , CPJ B:342
BINDING SITE FOR RESIDUE CA B 304
05
AC5
SOFTWARE
ASP C:58 , ASN C:59 , GLU C:136 , GLN C:137 , ASP C:138 , CPJ C:343
BINDING SITE FOR RESIDUE CA C 305
06
AC6
SOFTWARE
GLU C:136 , ASP C:138 , GLN C:148 , CPJ C:343 , HOH C:650 , HOH C:651
BINDING SITE FOR RESIDUE CA C 306
07
AC7
SOFTWARE
ASP D:58 , ASN D:59 , GLU D:136 , GLN D:137 , ASP D:138 , CPJ D:344
BINDING SITE FOR RESIDUE CA D 307
08
AC8
SOFTWARE
GLU D:136 , ASP D:138 , GLN D:148 , CPJ D:344 , HOH D:652 , HOH D:653
BINDING SITE FOR RESIDUE CA D 308
09
AC9
SOFTWARE
ASP E:58 , ASN E:59 , GLU E:136 , GLN E:137 , ASP E:138 , CPJ E:345
BINDING SITE FOR RESIDUE CA E 309
10
BC1
SOFTWARE
GLU E:136 , ASP E:138 , GLN E:148 , CPJ E:345 , HOH E:654 , HOH E:655
BINDING SITE FOR RESIDUE CA E 310
11
BC2
SOFTWARE
CPJ E:345 , GLU F:136 , ASP F:138 , GLN F:148 , HOH F:645 , HOH F:656
BINDING SITE FOR RESIDUE CA F 311
12
BC3
SOFTWARE
CPJ E:345 , ASP F:58 , ASN F:59 , GLU F:136 , GLN F:137 , ASP F:138
BINDING SITE FOR RESIDUE CA F 312
13
BC4
SOFTWARE
CPJ D:344 , ASP G:58 , ASN G:59 , GLU G:136 , GLN G:137 , ASP G:138
BINDING SITE FOR RESIDUE CA G 313
14
BC5
SOFTWARE
CPJ D:344 , GLU G:136 , ASP G:138 , GLN G:148 , HOH G:657 , HOH G:658
BINDING SITE FOR RESIDUE CA G 314
15
BC6
SOFTWARE
CPJ C:343 , ASP H:58 , ASN H:59 , GLU H:136 , GLN H:137 , ASP H:138
BINDING SITE FOR RESIDUE CA H 315
16
BC7
SOFTWARE
CPJ C:343 , GLU H:136 , ASP H:138 , GLN H:148 , HOH H:659 , HOH H:660
BINDING SITE FOR RESIDUE CA H 316
17
BC8
SOFTWARE
CPJ B:342 , ASP I:58 , ASN I:59 , GLU I:136 , GLN I:137 , ASP I:138
BINDING SITE FOR RESIDUE CA I 317
18
BC9
SOFTWARE
CPJ B:342 , GLU I:136 , ASP I:138 , GLN I:148 , HOH I:661 , HOH I:662
BINDING SITE FOR RESIDUE CA I 318
19
CC1
SOFTWARE
CPJ A:341 , GLU J:136 , ASP J:138 , GLN J:148 , HOH J:664 , HOH J:665
BINDING SITE FOR RESIDUE CA J 319
20
CC2
SOFTWARE
CPJ A:341 , ASP J:58 , ASN J:59 , GLU J:136 , GLN J:137 , ASP J:138
BINDING SITE FOR RESIDUE CA J 320
21
CC3
SOFTWARE
ASP K:58 , ASN K:59 , GLU K:136 , GLN K:137 , ASP K:138 , CA K:322 , CPJ P:346
BINDING SITE FOR RESIDUE CA K 321
22
CC4
SOFTWARE
GLU K:136 , ASP K:138 , GLN K:148 , CA K:321 , HOH K:667 , CPJ P:346 , HOH P:666
BINDING SITE FOR RESIDUE CA K 322
23
CC5
SOFTWARE
GLU L:136 , ASP L:138 , GLN L:148 , CPJ L:347 , HOH L:668 , HOH L:669
BINDING SITE FOR RESIDUE CA L 323
24
CC6
SOFTWARE
ASP L:58 , ASN L:59 , GLU L:136 , GLN L:137 , ASP L:138 , CPJ L:347
BINDING SITE FOR RESIDUE CA L 324
25
CC7
SOFTWARE
ASP M:58 , ASN M:59 , GLU M:136 , GLN M:137 , ASP M:138 , CPJ M:348
BINDING SITE FOR RESIDUE CA M 325
26
CC8
SOFTWARE
GLU M:136 , ASP M:138 , GLN M:148 , CPJ M:348 , HOH M:670 , HOH M:671
BINDING SITE FOR RESIDUE CA M 326
27
CC9
SOFTWARE
ASP N:58 , ASN N:59 , GLU N:136 , GLN N:137 , ASP N:138 , CPJ N:349
BINDING SITE FOR RESIDUE CA N 327
28
DC1
SOFTWARE
GLU N:136 , ASP N:138 , GLN N:148 , CPJ N:349 , HOH N:672 , HOH N:673
BINDING SITE FOR RESIDUE CA N 328
29
DC2
SOFTWARE
ASP O:58 , ASN O:59 , GLU O:136 , GLN O:137 , ASP O:138 , CPJ Q:350
BINDING SITE FOR RESIDUE CA O 329
30
DC3
SOFTWARE
GLU O:136 , ASP O:138 , GLN O:148 , HOH O:674 , HOH O:675 , CPJ Q:350
BINDING SITE FOR RESIDUE CA O 330
31
DC4
SOFTWARE
ASP P:58 , ASN P:59 , GLU P:136 , GLN P:137 , ASP P:138 , CPJ P:346
BINDING SITE FOR RESIDUE CA P 331
32
DC5
SOFTWARE
GLU P:136 , ASP P:138 , GLN P:148 , CPJ P:346 , HOH P:676 , HOH P:677
BINDING SITE FOR RESIDUE CA P 332
33
DC6
SOFTWARE
ASP Q:58 , ASN Q:59 , GLU Q:136 , GLN Q:137 , ASP Q:138 , CPJ Q:350
BINDING SITE FOR RESIDUE CA Q 333
34
DC7
SOFTWARE
GLU Q:136 , ASP Q:138 , GLN Q:148 , CPJ Q:350 , HOH Q:678 , HOH Q:679
BINDING SITE FOR RESIDUE CA Q 334
35
DC8
SOFTWARE
CPJ N:349 , ASP R:58 , ASN R:59 , GLU R:136 , GLN R:137 , ASP R:138
BINDING SITE FOR RESIDUE CA R 335
36
DC9
SOFTWARE
CPJ N:349 , GLU R:136 , ASP R:138 , GLN R:148 , HOH R:680
BINDING SITE FOR RESIDUE CA R 336
37
EC1
SOFTWARE
CPJ M:348 , ASP S:58 , ASN S:59 , GLU S:136 , GLN S:137 , ASP S:138
BINDING SITE FOR RESIDUE CA S 337
38
EC2
SOFTWARE
CPJ M:348 , GLU S:136 , ASP S:138 , GLN S:148 , HOH S:681 , HOH S:682
BINDING SITE FOR RESIDUE CA S 338
39
EC3
SOFTWARE
CPJ L:347 , ASP T:58 , ASN T:59 , GLU T:136 , GLN T:137 , ASP T:138
BINDING SITE FOR RESIDUE CA T 339
40
EC4
SOFTWARE
CPJ L:347 , GLU T:136 , ASP T:138 , GLN T:148 , HOH T:683 , HOH T:684
BINDING SITE FOR RESIDUE CA T 340
41
EC5
SOFTWARE
ASP A:58 , ASN A:59 , LEU A:62 , TYR A:74 , GLU A:136 , ASP A:138 , GLN A:148 , CA A:301 , CA A:302 , HOH A:2834 , ASP J:58 , ASN J:59 , LEU J:62 , TYR J:74 , GLU J:136 , ASP J:138 , GLN J:148 , CA J:319 , CA J:320 , HOH J:665
BINDING SITE FOR RESIDUE CPJ A 341
42
EC6
SOFTWARE
ASP B:58 , ASN B:59 , LEU B:62 , TYR B:74 , GLU B:136 , ASP B:138 , GLN B:148 , CA B:303 , CA B:304 , HOH B:649 , HOH B:786 , ASP I:58 , ASN I:59 , LEU I:62 , TYR I:74 , GLU I:136 , ASP I:138 , GLN I:148 , CA I:317 , CA I:318 , HOH I:662
BINDING SITE FOR RESIDUE CPJ B 342
43
EC7
SOFTWARE
ASP C:58 , ASN C:59 , LEU C:62 , TYR C:74 , GLU C:136 , ASP C:138 , GLN C:148 , CA C:305 , CA C:306 , HOH C:726 , HOH C:785 , HOH C:1600 , HOH C:2842 , ASP H:58 , ASN H:59 , LEU H:62 , TYR H:74 , GLU H:136 , ASP H:138 , GLN H:148 , CA H:315 , CA H:316
BINDING SITE FOR RESIDUE CPJ C 343
44
EC8
SOFTWARE
ASP D:58 , ASN D:59 , LEU D:62 , TYR D:74 , GLU D:136 , ASP D:138 , GLN D:148 , CA D:307 , CA D:308 , HOH D:653 , HOH D:1137 , HOH D:2005 , HOH D:3388 , ASP G:58 , ASN G:59 , LEU G:62 , TYR G:74 , GLU G:136 , ASP G:138 , GLN G:148 , CA G:313 , CA G:314 , HOH G:3324
BINDING SITE FOR RESIDUE CPJ D 344
45
EC9
SOFTWARE
ASP E:58 , ASN E:59 , LEU E:62 , TYR E:74 , GLU E:136 , ASP E:138 , GLN E:148 , CA E:309 , CA E:310 , HOH E:1738 , ASP F:58 , ASN F:59 , LEU F:62 , TYR F:74 , GLU F:136 , ASP F:138 , GLN F:148 , CA F:311 , CA F:312
BINDING SITE FOR RESIDUE CPJ E 345
46
FC1
SOFTWARE
ASP K:58 , ASN K:59 , LEU K:62 , TYR K:74 , GLU K:136 , ASP K:138 , GLN K:148 , CA K:321 , CA K:322 , ASP P:58 , ASN P:59 , LEU P:62 , TYR P:74 , GLU P:136 , ASP P:138 , GLN P:148 , CA P:331 , CA P:332 , HOH P:666 , HOH P:2706
BINDING SITE FOR RESIDUE CPJ P 346
47
FC2
SOFTWARE
ASP L:58 , ASN L:59 , LEU L:62 , TYR L:74 , GLU L:136 , ASP L:138 , GLN L:148 , CA L:323 , CA L:324 , HOH L:1274 , HOH L:2355 , ASP T:58 , ASN T:59 , LEU T:62 , TYR T:74 , GLU T:136 , ASP T:138 , GLN T:148 , CA T:339 , CA T:340 , HOH T:684
BINDING SITE FOR RESIDUE CPJ L 347
48
FC3
SOFTWARE
ASP M:58 , ASN M:59 , LEU M:62 , TYR M:64 , TYR M:74 , GLU M:136 , ASP M:138 , GLN M:148 , CA M:325 , CA M:326 , HOH M:1859 , HOH M:3370 , ASP S:58 , ASN S:59 , LEU S:62 , TYR S:74 , GLU S:136 , ASP S:138 , GLN S:148 , CA S:337 , CA S:338 , HOH S:682
BINDING SITE FOR RESIDUE CPJ M 348
49
FC4
SOFTWARE
ASP N:58 , ASN N:59 , LEU N:62 , TYR N:74 , GLU N:136 , ASP N:138 , GLN N:148 , CA N:327 , CA N:328 , HOH N:673 , ASP R:58 , ASN R:59 , LEU R:62 , TYR R:74 , GLU R:136 , ASP R:138 , GLN R:148 , CA R:335 , CA R:336
BINDING SITE FOR RESIDUE CPJ N 349
50
FC5
SOFTWARE
ASP O:58 , ASN O:59 , LEU O:62 , TYR O:74 , GLU O:136 , ASP O:138 , GLN O:148 , CA O:329 , CA O:330 , ASP Q:58 , ASN Q:59 , LEU Q:62 , TYR Q:74 , GLU Q:136 , ASP Q:138 , GLN Q:148 , CA Q:333 , CA Q:334 , HOH Q:1694
BINDING SITE FOR RESIDUE CPJ Q 350
[
close Site info
]
SAPs(SNPs)/Variants
(3, 60)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_035814 (G122S, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T, )
2: VAR_006054 (E136G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T, )
3: VAR_006055 (S139G, chain A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_035814
G
141
S
SAMP_HUMAN
Unclassified
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T
G
122
S
2
UniProt
VAR_006054
E
155
G
SAMP_HUMAN
Polymorphism
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T
E
136
G
3
UniProt
VAR_006055
S
158
G
SAMP_HUMAN
Polymorphism
---
A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R/S/T
S
139
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 40)
Info
All PROSITE Patterns/Profiles
1: PTX_2 (A:5-204,B:5-204,C:5-204,D:5-204,E:...)
2: PTX_1 (A:93-100,B:93-100,C:93-100,D:93-10...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PTX_2
PS51828
Pentraxin (PTX) domain profile.
SAMP_HUMAN
24-223
20
A:5-204
B:5-204
C:5-204
D:5-204
E:5-204
F:5-204
G:5-204
H:5-204
I:5-204
J:5-204
K:5-204
L:5-204
M:5-204
N:5-204
O:5-204
P:5-204
Q:5-204
R:5-204
S:5-204
T:5-204
2
PTX_1
PS00289
Pentraxin domain signature.
SAMP_HUMAN
112-119
20
A:93-100
B:93-100
C:93-100
D:93-100
E:93-100
F:93-100
G:93-100
H:93-100
I:93-100
J:93-100
K:93-100
L:93-100
M:93-100
N:93-100
O:93-100
P:93-100
Q:93-100
R:93-100
S:93-100
T:93-100
[
close PROSITE info
]
Exons
(2, 40)
Info
All Exons
Exon 1.1 (A:1-3 | B:1-3 | C:1-3 | D:1-3 | E:...)
Exon 1.2 (A:3-204 | B:3-204 | C:3-204 | D:3-...)
View:
Select:
Label:
All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000255040
1
ENSE00000904938
chr1:
159557615-159557775
161
SAMP_HUMAN
1-22
22
20
A:1-3
B:1-3
C:1-3
D:1-3
E:1-3
F:1-3
G:1-3
H:1-3
I:1-3
J:1-3
K:1-3
L:1-3
M:1-3
N:1-3
O:1-3
P:1-3
Q:1-3
R:1-3
S:1-3
T:1-3
3
3
3
3
3
3
3
3
3
3
3
3
3
3
3
3
3
3
3
3
1.2
ENST00000255040
2
ENSE00000904939
chr1:
159557891-159558655
765
SAMP_HUMAN
22-223
202
20
A:3-204
B:3-204
C:3-204
D:3-204
E:3-204
F:3-204
G:3-204
H:3-204
I:3-204
J:3-204
K:3-204
L:3-204
M:3-204
N:3-204
O:3-204
P:3-204
Q:3-204
R:3-204
S:3-204
T:3-204
202
202
202
202
202
202
202
202
202
202
202
202
202
202
202
202
202
202
202
202
[
close EXON info
]
SCOP Domains
(1, 20)
Info
All SCOP Domains
1a: SCOP_d2a3wa_ (A:)
1b: SCOP_d2a3wb_ (B:)
1c: SCOP_d2a3wc_ (C:)
1d: SCOP_d2a3wd_ (D:)
1e: SCOP_d2a3we_ (E:)
1f: SCOP_d2a3wf_ (F:)
1g: SCOP_d2a3wg_ (G:)
1h: SCOP_d2a3wh_ (H:)
1i: SCOP_d2a3wi_ (I:)
1j: SCOP_d2a3wj_ (J:)
1k: SCOP_d2a3wk_ (K:)
1l: SCOP_d2a3wl_ (L:)
1m: SCOP_d2a3wm_ (M:)
1n: SCOP_d2a3wn_ (N:)
1o: SCOP_d2a3wo_ (O:)
1p: SCOP_d2a3wp_ (P:)
1q: SCOP_d2a3wq_ (Q:)
1r: SCOP_d2a3wr_ (R:)
1s: SCOP_d2a3ws_ (S:)
1t: SCOP_d2a3wt_ (T:)
View:
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Pentraxin (pentaxin)
(18)
Protein domain
:
Serum amyloid P component (SAP)
(12)
Human (Homo sapiens) [TaxId: 9606]
(12)
1a
d2a3wa_
A:
1b
d2a3wb_
B:
1c
d2a3wc_
C:
1d
d2a3wd_
D:
1e
d2a3we_
E:
1f
d2a3wf_
F:
1g
d2a3wg_
G:
1h
d2a3wh_
H:
1i
d2a3wi_
I:
1j
d2a3wj_
J:
1k
d2a3wk_
K:
1l
d2a3wl_
L:
1m
d2a3wm_
M:
1n
d2a3wn_
N:
1o
d2a3wo_
O:
1p
d2a3wp_
P:
1q
d2a3wq_
Q:
1r
d2a3wr_
R:
1s
d2a3ws_
S:
1t
d2a3wt_
T:
[
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CATH Domains
(1, 20)
Info
all CATH domains
1a: CATH_2a3wA00 (A:1-204)
1b: CATH_2a3wB00 (B:1-204)
1c: CATH_2a3wC00 (C:1-204)
1d: CATH_2a3wD00 (D:1-204)
1e: CATH_2a3wE00 (E:1-204)
1f: CATH_2a3wF00 (F:1-204)
1g: CATH_2a3wG00 (G:1-204)
1h: CATH_2a3wH00 (H:1-204)
1i: CATH_2a3wI00 (I:1-204)
1j: CATH_2a3wJ00 (J:1-204)
1k: CATH_2a3wK00 (K:1-204)
1l: CATH_2a3wL00 (L:1-204)
1m: CATH_2a3wM00 (M:1-204)
1n: CATH_2a3wN00 (N:1-204)
1o: CATH_2a3wO00 (O:1-204)
1p: CATH_2a3wP00 (P:1-204)
1q: CATH_2a3wQ00 (Q:1-204)
1r: CATH_2a3wR00 (R:1-204)
1s: CATH_2a3wS00 (S:1-204)
1t: CATH_2a3wT00 (T:1-204)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.200, no name defined]
(421)
Human (Homo sapiens)
(49)
1a
2a3wA00
A:1-204
1b
2a3wB00
B:1-204
1c
2a3wC00
C:1-204
1d
2a3wD00
D:1-204
1e
2a3wE00
E:1-204
1f
2a3wF00
F:1-204
1g
2a3wG00
G:1-204
1h
2a3wH00
H:1-204
1i
2a3wI00
I:1-204
1j
2a3wJ00
J:1-204
1k
2a3wK00
K:1-204
1l
2a3wL00
L:1-204
1m
2a3wM00
M:1-204
1n
2a3wN00
N:1-204
1o
2a3wO00
O:1-204
1p
2a3wP00
P:1-204
1q
2a3wQ00
Q:1-204
1r
2a3wR00
R:1-204
1s
2a3wS00
S:1-204
1t
2a3wT00
T:1-204
[
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Pfam Domains
(0, 0)
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