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1ZZW
Asym. Unit
Info
Asym.Unit (58 KB)
Biol.Unit 1 (28 KB)
Biol.Unit 2 (29 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CATALYTIC DOMAIN OF HUMAN MAP KINASE PHOSPHATASE 5
Authors
:
D. G. Jeong, T. S. Yoon, J. H. Kim, M. Y. Shim, S. K. Jeong, J. H. Son, S. E. Ryu, S. J. Kim
Date
:
14 Jun 05 (Deposition) - 04 Jul 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Phosphatase, Mkp, Ptp, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. G. Jeong, T. S. Yoon, J. H. Kim, M. Y. Shim, S. K. Jeong, J. H. Son, S. E. Ryu, S. J. Kim
Crystal Structure Of The Catalytic Domain Of Human Map Kinase Phosphatase 5: Structural Insight Into Constitutively Active Phosphatase.
J. Mol. Biol. V. 360 946 2006
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
2
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:377 , CYS A:408 , GLN A:409 , ALA A:410 , GLY A:411 , VAL A:412 , SER A:413 , ARG A:414
BINDING SITE FOR RESIDUE SO4 A 501
2
AC2
SOFTWARE
HOH B:226 , CYS B:408 , GLN B:409 , ALA B:410 , GLY B:411 , VAL B:412 , SER B:413 , ARG B:414
BINDING SITE FOR RESIDUE SO4 B 502
3
AC3
SOFTWARE
HOH B:255 , SER B:413 , THR B:417 , ILE B:445 , SER B:446 , ASN B:448 , PHE B:451
BINDING SITE FOR RESIDUE EDO B 503
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: TYR_PHOSPHATASE_DUAL (A:321-463,B:321-463)
2: TYR_PHOSPHATASE_2 (A:384-443,B:384-443)
3: TYR_PHOSPHATASE_1 (A:406-416,B:406-416)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TYR_PHOSPHATASE_DUAL
PS50054
Dual specificity protein phosphatase family profile.
DUS10_HUMAN
321-463
2
A:321-463
B:321-463
2
TYR_PHOSPHATASE_2
PS50056
Tyrosine specific protein phosphatases family profile.
DUS10_HUMAN
384-443
2
A:384-443
B:384-443
3
TYR_PHOSPHATASE_1
PS00383
Tyrosine specific protein phosphatases active site.
DUS10_HUMAN
406-416
2
A:406-416
B:406-416
[
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Exons
(2, 4)
Info
All Exons
Exon 1.5 (A:319-395 | B:321-395)
Exon 1.6d (A:395-465 | B:395-467)
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All Exon Boundaries
1: Boundary 1.2a/1.5
2: Boundary 1.5/1.6d
3: Boundary 1.6d/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000366899
1a
ENSE00001900138
chr1:
221915518-221915323
196
DUS10_HUMAN
-
0
0
-
-
1.2a
ENST00000366899
2a
ENSE00002151685
chr1:
221913129-221912276
854
DUS10_HUMAN
1-271
271
0
-
-
1.5
ENST00000366899
5
ENSE00001745171
chr1:
221879808-221879437
372
DUS10_HUMAN
271-395
125
2
A:319-395
B:321-395
77
75
1.6d
ENST00000366899
6d
ENSE00001285025
chr1:
221876019-221874766
1254
DUS10_HUMAN
395-482
88
2
A:395-465
B:395-467
71
73
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1zzwa_ (A:)
1b: SCOP_d1zzwb_ (B:)
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)
Protein Domains
(
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
(Phosphotyrosine protein) phosphatases II
(296)
Superfamily
:
(Phosphotyrosine protein) phosphatases II
(296)
Family
:
automated matches
(83)
Protein domain
:
automated matches
(83)
Human (Homo sapiens) [TaxId: 9606]
(76)
1a
d1zzwa_
A:
1b
d1zzwb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1zzwA00 (A:319-465)
1b: CATH_1zzwB00 (B:321-467)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Protein-Tyrosine Phosphatase; Chain A
(262)
Homologous Superfamily
:
Protein tyrosine phosphatase superfamily
(228)
Human (Homo sapiens)
(196)
1a
1zzwA00
A:319-465
1b
1zzwB00
B:321-467
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_DSPc_1zzwB01 (B:329-461)
1b: PFAM_DSPc_1zzwB02 (B:329-461)
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Clan
:
Phosphatase
(121)
Family
:
DSPc
(22)
Homo sapiens (Human)
(13)
1a
DSPc-1zzwB01
B:329-461
1b
DSPc-1zzwB02
B:329-461
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