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1ZZA
Asym. Unit
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Asym.Unit (651 KB)
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Models
(25 )
Title
:
SOLUTION NMR STRUCTURE OF THE MEMBRANE PROTEIN STANNIN
Authors
:
B. A. Buck-Koehntop, A. Mascioni, J. J. Buffy, G. Veglia
Date
:
13 Jun 05 (Deposition) - 20 Dec 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (25 x)
Keywords
:
Helix, Membrane Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
B. A. Buck-Koehntop, A. Mascioni, J. J. Buffy, G. Veglia
Structure, Dynamics, And Membrane Topology Of Stannin: A Mediator Of Neuronal Cell Apoptosis Induced By Trimethyltin Chloride.
J. Mol. Biol. V. 354 652 2005
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_018842 (V19I, chain A, )
2: VAR_018843 (G90S, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_018842
V
17
I
SNN_HUMAN
Polymorphism
8191328
A
V
19
I
2
UniProt
VAR_018843
G
88
S
SNN_HUMAN
Polymorphism
8191329
A
G
90
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
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Exons
(1, 1)
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Exon 1.2 (A:3-90)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000329565
1
ENSE00001489923
chr16:
11762270-11762396
127
SNN_HUMAN
-
0
0
-
-
1.2
ENST00000329565
2
ENSE00001292015
chr16:
11769831-11773015
3185
SNN_HUMAN
1-117
117
1
A:3-90
88
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SCOP Domains
(0, 0)
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1zzaA00 (A:1-90)
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Class
:
Few Secondary Structures
(1120)
Architecture
:
Irregular
(1120)
Topology
:
MYOD Basic-Helix-Loop-Helix Domain, subunit B
(12)
Homologous Superfamily
:
membrane protein stannin
(1)
Human (Homo sapiens)
(1)
1a
1zzaA00
A:1-90
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Pfam Domains
(3, 3)
Info
all PFAM domains
1a: PFAM_SNN_cytoplasm_1zzaA01 (A:63-89)
2a: PFAM_SNN_linker_1zzaA02 (A:36-61)
3a: PFAM_SNN_transmemb_1zzaA03 (A:3-35)
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Clan
:
no clan defined [family: SNN_cytoplasm]
(1)
Family
:
SNN_cytoplasm
(1)
Homo sapiens (Human)
(1)
1a
SNN_cytoplasm-1zzaA01
A:63-89
Clan
:
no clan defined [family: SNN_linker]
(1)
Family
:
SNN_linker
(1)
Homo sapiens (Human)
(1)
2a
SNN_linker-1zzaA02
A:36-61
Clan
:
no clan defined [family: SNN_transmemb]
(1)
Family
:
SNN_transmemb
(1)
Homo sapiens (Human)
(1)
3a
SNN_transmemb-1zzaA03
A:3-35
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Chain A
Asymmetric Unit 1
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Asym.Unit (651 KB)
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