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Getting 'Exon' information from database.
1ZY8
Asym. Unit
Info
Asym.Unit (1.5 MB)
Biol.Unit 1 (163 KB)
Biol.Unit 2 (164 KB)
Biol.Unit 3 (164 KB)
Biol.Unit 4 (164 KB)
Biol.Unit 5 (162 KB)
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Models
(2 )
Title
:
THE CRYSTAL STRUCTURE OF DIHYDROLIPOAMIDE DEHYDROGENASE AND DIHYDROLIPOAMIDE DEHYDROGENASE-BINDING PROTEIN (DIDOMAIN) SUBCOMPLEX OF HUMAN PYRUVATE DEHYDROGENASE COMPLEX.
Authors
:
E. M. Ciszak, A. Makal, Y. S. Hong, A. K. Vettaikkorumakankauv, L. G. Korotchkina, M. S. Patel
Date
:
09 Jun 05 (Deposition) - 15 Nov 05 (Release) - 26 Jan 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.59
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O (2 x)
Biol. Unit 1: A,B,K (1x)
Biol. Unit 2: C,D,L (1x)
Biol. Unit 3: E,F,M (1x)
Biol. Unit 4: G,H,N (1x)
Biol. Unit 5: I,J,O (1x)
Keywords
:
Human, Dihydrolipoamide Dehydrogenase, E3, Dihydrolipoyl Dehydrogenase, Dihydrolipoamide Dehydrogenase Binding Protein, E3-Binding Protein, Pyruvate Dehydrogenase Complex, Alpha-Keto Acid Complex, Flavin Adenine Dinucleotide Cofactor, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. M. Ciszak, A. Makal, Y. S. Hong, A. K. Vettaikkorumakankauv, L. G. Korotchkina, M. S. Patel
How Dihydrolipoamide Dehydrogenase-Binding Protein Binds Dihydrolipoamide Dehydrogenase In The Human Pyruvate Dehydrogenase Complex.
J. Biol. Chem. V. 281 648 2006
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 20)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
1c: FLAVIN-ADENINE DINUCLEOTIDE (FADc)
1d: FLAVIN-ADENINE DINUCLEOTIDE (FADd)
1e: FLAVIN-ADENINE DINUCLEOTIDE (FADe)
1f: FLAVIN-ADENINE DINUCLEOTIDE (FADf)
1g: FLAVIN-ADENINE DINUCLEOTIDE (FADg)
1h: FLAVIN-ADENINE DINUCLEOTIDE (FADh)
1i: FLAVIN-ADENINE DINUCLEOTIDE (FADi)
1j: FLAVIN-ADENINE DINUCLEOTIDE (FADj)
1k: FLAVIN-ADENINE DINUCLEOTIDE (FADk)
1l: FLAVIN-ADENINE DINUCLEOTIDE (FADl)
1m: FLAVIN-ADENINE DINUCLEOTIDE (FADm)
1n: FLAVIN-ADENINE DINUCLEOTIDE (FADn)
1o: FLAVIN-ADENINE DINUCLEOTIDE (FADo)
1p: FLAVIN-ADENINE DINUCLEOTIDE (FADp)
1q: FLAVIN-ADENINE DINUCLEOTIDE (FADq)
1r: FLAVIN-ADENINE DINUCLEOTIDE (FADr)
1s: FLAVIN-ADENINE DINUCLEOTIDE (FADs)
1t: FLAVIN-ADENINE DINUCLEOTIDE (FADt)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FAD
20
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
[
close Hetero Component info
]
Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:13 , GLY A:15 , PRO A:16 , GLY A:17 , GLU A:36 , LYS A:37 , ASN A:38 , GLY A:43 , THR A:44 , CYS A:45 , GLY A:49 , CYS A:50 , LYS A:54 , TYR A:118 , GLY A:119 , ALA A:147 , THR A:148 , GLY A:149 , SER A:150 , ILE A:189 , PHE A:283 , GLY A:319 , ASP A:320 , MET A:326 , LEU A:327 , ALA A:328 , HIS A:329 , TYR A:359 , HOH A:4752 , HOH A:4763 , HOH A:4786 , HIS B:452
BINDING SITE FOR RESIDUE FAD A 4750
02
AC2
SOFTWARE
HIS A:452 , ILE B:12 , GLY B:13 , GLY B:15 , PRO B:16 , GLU B:36 , LYS B:37 , ASN B:38 , GLY B:43 , THR B:44 , CYS B:45 , VAL B:48 , GLY B:49 , CYS B:50 , LYS B:54 , TYR B:118 , GLY B:119 , ALA B:147 , THR B:148 , GLY B:149 , SER B:150 , ILE B:189 , PHE B:283 , GLY B:319 , ASP B:320 , MET B:326 , LEU B:327 , ALA B:328 , HIS B:329 , TYR B:359 , HOH B:4753 , HOH B:4764 , HOH B:4767 , HOH B:4794
BINDING SITE FOR RESIDUE FAD B 4751
03
AC3
SOFTWARE
ILE C:12 , GLY C:13 , GLY C:15 , PRO C:16 , GLY C:17 , GLU C:36 , LYS C:37 , ASN C:38 , GLY C:43 , THR C:44 , CYS C:45 , VAL C:48 , GLY C:49 , CYS C:50 , LYS C:54 , GLY C:117 , TYR C:118 , GLY C:119 , ALA C:147 , THR C:148 , GLY C:149 , SER C:150 , SER C:168 , ILE C:189 , PHE C:283 , GLY C:319 , ASP C:320 , MET C:326 , LEU C:327 , ALA C:328 , HIS C:329 , HOH C:4753 , HOH C:4754 , HOH C:4759 , HOH C:4766 , HOH C:4822 , HIS D:452
BINDING SITE FOR RESIDUE FAD C 4752
04
AC4
SOFTWARE
HIS C:452 , ILE D:12 , GLY D:13 , GLY D:15 , PRO D:16 , GLU D:36 , LYS D:37 , ASN D:38 , GLY D:43 , THR D:44 , CYS D:45 , GLY D:49 , CYS D:50 , LYS D:54 , GLY D:119 , ALA D:147 , THR D:148 , GLY D:149 , SER D:150 , ARG D:280 , GLY D:319 , ASP D:320 , MET D:326 , LEU D:327 , ALA D:328 , HIS D:329 , TYR D:359 , HOH D:4754 , HOH D:4755 , HOH D:4767 , HOH D:4813
BINDING SITE FOR RESIDUE FAD D 4753
05
AC5
SOFTWARE
ILE E:12 , GLY E:13 , GLY E:15 , PRO E:16 , GLY E:17 , ILE E:35 , GLU E:36 , LYS E:37 , ASN E:38 , GLY E:43 , THR E:44 , CYS E:45 , VAL E:48 , GLY E:49 , CYS E:50 , SER E:53 , LYS E:54 , TYR E:118 , GLY E:119 , ALA E:147 , THR E:148 , GLY E:149 , SER E:150 , ILE E:189 , PHE E:283 , GLY E:319 , ASP E:320 , MET E:326 , LEU E:327 , ALA E:328 , HIS E:329 , ALA E:331 , TYR E:359 , HOH E:4755 , HOH E:4756 , HOH E:4767 , HIS F:452
BINDING SITE FOR RESIDUE FAD E 4754
06
AC6
SOFTWARE
HIS E:452 , ILE F:12 , GLY F:13 , GLY F:15 , PRO F:16 , GLU F:36 , LYS F:37 , ASN F:38 , GLY F:43 , THR F:44 , CYS F:45 , GLY F:49 , CYS F:50 , LYS F:54 , TYR F:118 , GLY F:119 , ALA F:147 , THR F:148 , GLY F:149 , SER F:150 , ILE F:189 , PHE F:283 , GLY F:319 , ASP F:320 , MET F:326 , LEU F:327 , ALA F:328 , HIS F:329 , TYR F:359 , HOH F:4797
BINDING SITE FOR RESIDUE FAD F 4755
07
AC7
SOFTWARE
ILE G:12 , GLY G:13 , GLY G:15 , PRO G:16 , GLY G:17 , GLU G:36 , LYS G:37 , ASN G:38 , GLY G:43 , THR G:44 , CYS G:45 , VAL G:48 , GLY G:49 , CYS G:50 , LYS G:54 , GLY G:117 , TYR G:118 , GLY G:119 , ALA G:147 , THR G:148 , GLY G:149 , SER G:150 , SER G:168 , PHE G:283 , GLY G:319 , ASP G:320 , MET G:326 , LEU G:327 , ALA G:328 , TYR G:359 , HOH G:4757 , HOH G:4758 , HOH G:4784 , HIS H:452 , HOH H:4783
BINDING SITE FOR RESIDUE FAD G 4756
08
AC8
SOFTWARE
HIS G:452 , HOH G:4785 , GLY H:13 , GLY H:15 , PRO H:16 , GLU H:36 , LYS H:37 , ASN H:38 , GLY H:43 , THR H:44 , CYS H:45 , GLY H:49 , CYS H:50 , LYS H:54 , GLY H:117 , TYR H:118 , GLY H:119 , ALA H:147 , THR H:148 , GLY H:149 , SER H:150 , SER H:168 , ILE H:189 , PHE H:283 , GLY H:319 , ASP H:320 , MET H:326 , LEU H:327 , ALA H:328 , HIS H:329 , TYR H:359 , HOH H:4758 , HOH H:4759 , HOH H:4760
BINDING SITE FOR RESIDUE FAD H 4757
09
AC9
SOFTWARE
GLY I:13 , GLY I:15 , PRO I:16 , GLU I:36 , LYS I:37 , GLY I:43 , THR I:44 , CYS I:45 , VAL I:48 , GLY I:49 , CYS I:50 , SER I:53 , LYS I:54 , TYR I:118 , GLY I:119 , ALA I:147 , THR I:148 , GLY I:149 , SER I:150 , SER I:168 , ILE I:189 , PHE I:283 , GLY I:319 , ASP I:320 , MET I:326 , LEU I:327 , ALA I:328 , HIS I:329 , ALA I:331 , TYR I:359 , HOH I:4759 , HOH I:4761 , HOH I:4765 , HIS J:452
BINDING SITE FOR RESIDUE FAD I 4758
10
BC1
SOFTWARE
HIS I:452 , ILE J:12 , GLY J:13 , PRO J:16 , GLU J:36 , LYS J:37 , ASN J:38 , GLY J:43 , THR J:44 , CYS J:45 , VAL J:48 , CYS J:50 , LYS J:54 , TYR J:118 , GLY J:119 , ALA J:147 , THR J:148 , GLY J:149 , SER J:150 , SER J:168 , ILE J:189 , PHE J:283 , GLY J:319 , ASP J:320 , MET J:326 , LEU J:327 , ALA J:328 , HIS J:329 , TYR J:359 , HOH J:4762 , HOH J:4785
BINDING SITE FOR RESIDUE FAD J 4759
[
close Site info
]
SAPs(SNPs)/Variants
(6, 60)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_006907 (K37E, chain A/B/C/D/E/F/G/H/I/J, )
2: VAR_031922 (K69T, chain A/B/C/D/E/F/G/H/I/J, )
3: VAR_015820 (G194C, chain A/B/C/D/E/F/G/H/I/J, )
4: VAR_014555 (L296V, chain A/B/C/D/E/F/G/H/I/J, )
5: VAR_006908 (P453L, chain A/B/C/D/E/F/G/H/I/J, )
6: VAR_015821 (R460G, chain A/B/C/D/E/F/G/H/I/J, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_006907
K
72
E
DLDH_HUMAN
Disease (DLDD)
---
A/B/C/D/E/F/G/H/I/J
K
37
E
2
UniProt
VAR_031922
K
104
T
DLDH_HUMAN
Polymorphism
1130477
A/B/C/D/E/F/G/H/I/J
K
69
T
3
UniProt
VAR_015820
G
229
C
DLDH_HUMAN
Disease (DLDD)
---
A/B/C/D/E/F/G/H/I/J
G
194
C
4
UniProt
VAR_014555
L
331
V
DLDH_HUMAN
Polymorphism
17624
A/B/C/D/E/F/G/H/I/J
L
296
V
5
UniProt
VAR_006908
P
488
L
DLDH_HUMAN
Disease (DLDD)
---
A/B/C/D/E/F/G/H/I/J
P
453
L
6
UniProt
VAR_015821
R
495
G
DLDH_HUMAN
Disease (DLDD)
---
A/B/C/D/E/F/G/H/I/J
R
460
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 15)
Info
All PROSITE Patterns/Profiles
1: PYRIDINE_REDOX_1 (A:42-52,B:42-52,C:42-52,D:42-52,E:...)
2: PSBD (K:130-167,L:130-167,M:130-167,N:13...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PYRIDINE_REDOX_1
PS00076
Pyridine nucleotide-disulphide oxidoreductases class-I active site.
DLDH_HUMAN
77-87
10
A:42-52
B:42-52
C:42-52
D:42-52
E:42-52
F:42-52
G:42-52
H:42-52
I:42-52
J:42-52
2
PSBD
PS51826
Peripheral subunit-binding (PSBD) domain profile.
ODPX_HUMAN
183-220
5
K:130-167
L:130-167
M:130-167
N:130-167
O:130-167
[
close PROSITE info
]
Exons
(15, 140)
Info
All Exons
Exon 1.3a (A:1-5 | B:1-5 | C:1-5 | D:1-5 | E:...)
Exon 1.4 (A:5-31 | B:5-31 | C:5-31 | D:5-31 ...)
Exon 1.5 (A:32-54 | B:32-54 | C:32-54 | D:32...)
Exon 1.6a (A:55-78 | B:55-78 | C:55-78 | D:55...)
Exon 1.7e (A:78-111 | B:78-111 | C:78-111 | D...)
Exon 1.8b (A:112-159 | B:112-159 | C:112-159 ...)
Exon 1.9a (A:160-193 | B:160-193 | C:160-193 ...)
Exon 1.10b (A:194-257 | B:194-257 | C:194-257 ...)
Exon 1.11 (A:257-314 | B:257-314 | C:257-314 ...)
Exon 1.12 (A:314-377 | B:314-377 | C:314-377 ...)
Exon 1.13 (A:378-423 | B:378-423 | C:378-423 ...)
Exon 1.14 (A:424-453 | B:424-453 | C:424-453 ...)
Exon 1.15e (A:454-474 | B:454-474 | C:454-474 ...)
Exon 2.7c (K:130-161 | L:130-161 | M:130-161 ...)
Exon 2.8 (K:161-173 | L:161-173 | M:161-173 ...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.1a/1.3a
02: Boundary 1.3a/1.4
03: Boundary 1.4/1.5
04: Boundary 1.5/1.6a
05: Boundary 1.6a/1.7e
06: Boundary 1.7e/1.8b
07: Boundary 1.8b/1.9a
08: Boundary 1.9a/1.10b
09: Boundary 1.10b/1.11
10: Boundary 1.11/1.12
11: Boundary 1.12/1.13
12: Boundary 1.13/1.14
13: Boundary 1.14/1.15e
14: Boundary 1.15e/-
15: Boundary 2.6/2.7c
16: Boundary 2.7c/2.8
17: Boundary 2.8/2.9
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000205402
1a
ENSE00001876887
chr7:
107531415-107531734
320
DLDH_HUMAN
1-13
13
0
-
-
1.3a
ENST00000205402
3a
ENSE00000715773
chr7:
107533645-107533723
79
DLDH_HUMAN
14-40
27
10
A:1-5
B:1-5
C:1-5
D:1-5
E:1-5
F:1-5
G:1-5
H:1-5
I:1-5
J:1-5
5
5
5
5
5
5
5
5
5
5
1.4
ENST00000205402
4
ENSE00000715774
chr7:
107542183-107542262
80
DLDH_HUMAN
40-66
27
10
A:5-31
B:5-31
C:5-31
D:5-31
E:5-31
F:5-31
G:5-31
H:5-31
I:5-31
J:5-31
27
27
27
27
27
27
27
27
27
27
1.5
ENST00000205402
5
ENSE00000715776
chr7:
107542770-107542838
69
DLDH_HUMAN
67-89
23
10
A:32-54
B:32-54
C:32-54
D:32-54
E:32-54
F:32-54
G:32-54
H:32-54
I:32-54
J:32-54
23
23
23
23
23
23
23
23
23
23
1.6a
ENST00000205402
6a
ENSE00001665843
chr7:
107543923-107543992
70
DLDH_HUMAN
90-113
24
10
A:55-78
B:55-78
C:55-78
D:55-78
E:55-78
F:55-78
G:55-78
H:55-78
I:55-78
J:55-78
24
24
24
24
24
24
24
24
24
24
1.7e
ENST00000205402
7e
ENSE00001717474
chr7:
107545403-107545503
101
DLDH_HUMAN
113-146
34
10
A:78-111
B:78-111
C:78-111
D:78-111
E:78-111
F:78-111
G:78-111
H:78-111
I:78-111
J:78-111
34
34
34
34
34
34
34
34
34
34
1.8b
ENST00000205402
8b
ENSE00001761545
chr7:
107545806-107545949
144
DLDH_HUMAN
147-194
48
10
A:112-159
B:112-159
C:112-159
D:112-159
E:112-159
F:112-159
G:112-159
H:112-159
I:112-159
J:112-159
48
48
48
48
48
48
48
48
48
48
1.9a
ENST00000205402
9a
ENSE00001638968
chr7:
107546712-107546813
102
DLDH_HUMAN
195-228
34
10
A:160-193
B:160-193
C:160-193
D:160-193
E:160-193
F:160-193
G:160-193
H:160-193
I:160-193
J:160-193
34
34
34
34
34
34
34
34
34
34
1.10b
ENST00000205402
10b
ENSE00001672433
chr7:
107555951-107556141
191
DLDH_HUMAN
229-292
64
10
A:194-257
B:194-257
C:194-257
D:194-257
E:194-257
F:194-257
G:194-257
H:194-257
I:194-257
J:194-257
64
64
64
64
64
64
64
64
64
64
1.11
ENST00000205402
11
ENSE00001609201
chr7:
107557239-107557409
171
DLDH_HUMAN
292-349
58
10
A:257-314
B:257-314
C:257-314
D:257-314
E:257-314
F:257-314
G:257-314
H:257-314
I:257-314
J:257-314
58
58
58
58
58
58
58
58
58
58
1.12
ENST00000205402
12
ENSE00001752704
chr7:
107557718-107557907
190
DLDH_HUMAN
349-412
64
10
A:314-377
B:314-377
C:314-377
D:314-377
E:314-377
F:314-377
G:314-377
H:314-377
I:314-377
J:314-377
64
64
64
64
64
64
64
64
64
64
1.13
ENST00000205402
13
ENSE00001658920
chr7:
107558369-107558506
138
DLDH_HUMAN
413-458
46
10
A:378-423
B:378-423
C:378-423
D:378-423
E:378-423
F:378-423
G:378-423
H:378-423
I:378-423
J:378-423
46
46
46
46
46
46
46
46
46
46
1.14
ENST00000205402
14
ENSE00001606668
chr7:
107559455-107559544
90
DLDH_HUMAN
459-488
30
10
A:424-453
B:424-453
C:424-453
D:424-453
E:424-453
F:424-453
G:424-453
H:424-453
I:424-453
J:424-453
30
30
30
30
30
30
30
30
30
30
1.15e
ENST00000205402
15e
ENSE00000881778
chr7:
107559639-107560360
722
DLDH_HUMAN
489-509
21
10
A:454-474
B:454-474
C:454-474
D:454-474
E:454-474
F:454-474
G:454-474
H:454-474
I:454-474
J:454-474
21
21
21
21
21
21
21
21
21
21
2.3a
ENST00000227868
3a
ENSE00000824440
chr11:
34938119-34938362
244
ODPX_HUMAN
1-54
54
0
-
-
2.4
ENST00000227868
4
ENSE00000710349
chr11:
34952951-34953031
81
ODPX_HUMAN
54-81
28
0
-
-
2.5
ENST00000227868
5
ENSE00001150239
chr11:
34969053-34969153
101
ODPX_HUMAN
81-114
34
0
-
-
2.6
ENST00000227868
6
ENSE00001150231
chr11:
34978931-34979130
200
ODPX_HUMAN
115-181
67
0
-
-
2.7c
ENST00000227868
7c
ENSE00001150226
chr11:
34981967-34982065
99
ODPX_HUMAN
181-214
34
5
K:130-161
L:130-161
M:130-161
N:130-161
O:130-161
32
32
32
32
32
2.8
ENST00000227868
8
ENSE00001150220
chr11:
34988187-34988361
175
ODPX_HUMAN
214-272
59
5
K:161-173
L:161-173
M:161-173
N:161-173
O:161-173
13
13
13
13
13
2.9
ENST00000227868
9
ENSE00001330369
chr11:
34991686-34991833
148
ODPX_HUMAN
273-322
50
0
-
-
2.11b
ENST00000227868
11b
ENSE00000710371
chr11:
34999671-34999729
59
ODPX_HUMAN
322-341
20
0
-
-
2.12a
ENST00000227868
12a
ENSE00000710373
chr11:
35006117-35006275
159
ODPX_HUMAN
342-394
53
0
-
-
2.13
ENST00000227868
13
ENSE00000710375
chr11:
35013862-35013926
65
ODPX_HUMAN
395-416
22
0
-
-
2.14c
ENST00000227868
14c
ENSE00002154149
chr11:
35016461-35017518
1058
ODPX_HUMAN
416-501
86
0
-
-
[
close EXON info
]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(3, 35)
Info
all CATH domains
1a: CATH_1zy8A03 (A:351-474)
1b: CATH_1zy8B03 (B:351-474)
1c: CATH_1zy8C03 (C:351-474)
1d: CATH_1zy8D03 (D:351-474)
1e: CATH_1zy8E03 (E:351-474)
1f: CATH_1zy8F03 (F:351-474)
1g: CATH_1zy8G03 (G:351-474)
1h: CATH_1zy8H03 (H:351-474)
1i: CATH_1zy8I03 (I:351-474)
1j: CATH_1zy8J03 (J:351-474)
2a: CATH_1zy8A01 (A:1-152,A:279-350)
2b: CATH_1zy8G01 (G:1-152,G:279-350)
2c: CATH_1zy8H01 (H:1-152,H:279-350)
2d: CATH_1zy8I01 (I:1-152,I:279-350)
2e: CATH_1zy8J01 (J:1-152,J:279-350)
2f: CATH_1zy8A02 (A:153-278)
2g: CATH_1zy8B02 (B:153-278)
2h: CATH_1zy8C02 (C:153-278)
2i: CATH_1zy8D02 (D:153-278)
2j: CATH_1zy8E02 (E:153-278)
2k: CATH_1zy8F02 (F:153-278)
2l: CATH_1zy8G02 (G:153-278)
2m: CATH_1zy8H02 (H:153-278)
2n: CATH_1zy8I02 (I:153-278)
2o: CATH_1zy8J02 (J:153-278)
2p: CATH_1zy8B01 (B:1-152,B:279-350)
2q: CATH_1zy8C01 (C:1-152,C:279-350)
2r: CATH_1zy8D01 (D:1-152,D:279-350)
2s: CATH_1zy8E01 (E:1-152,E:279-350)
2t: CATH_1zy8F01 (F:1-152,F:279-350)
3a: CATH_1zy8K00 (K:130-173)
3b: CATH_1zy8L00 (L:130-173)
3c: CATH_1zy8M00 (M:130-173)
3d: CATH_1zy8N00 (N:130-173)
3e: CATH_1zy8O00 (O:130-173)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Enolase-like; domain 1
(252)
Homologous Superfamily
:
[code=3.30.390.30, no name defined]
(99)
Human (Homo sapiens)
(26)
1a
1zy8A03
A:351-474
1b
1zy8B03
B:351-474
1c
1zy8C03
C:351-474
1d
1zy8D03
D:351-474
1e
1zy8E03
E:351-474
1f
1zy8F03
F:351-474
1g
1zy8G03
G:351-474
1h
1zy8H03
H:351-474
1i
1zy8I03
I:351-474
1j
1zy8J03
J:351-474
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
FAD/NAD(P)-binding domain
(373)
Homologous Superfamily
:
[code=3.50.50.60, no name defined]
(373)
Human (Homo sapiens)
(57)
2a
1zy8A01
A:1-152,A:279-350
2b
1zy8G01
G:1-152,G:279-350
2c
1zy8H01
H:1-152,H:279-350
2d
1zy8I01
I:1-152,I:279-350
2e
1zy8J01
J:1-152,J:279-350
2f
1zy8A02
A:153-278
2g
1zy8B02
B:153-278
2h
1zy8C02
C:153-278
2i
1zy8D02
D:153-278
2j
1zy8E02
E:153-278
2k
1zy8F02
F:153-278
2l
1zy8G02
G:153-278
2m
1zy8H02
H:153-278
2n
1zy8I02
I:153-278
2o
1zy8J02
J:153-278
2p
1zy8B01
B:1-152,B:279-350
2q
1zy8C01
C:1-152,C:279-350
2r
1zy8D01
D:1-152,D:279-350
2s
1zy8E01
E:1-152,E:279-350
2t
1zy8F01
F:1-152,F:279-350
Class
:
Few Secondary Structures
(1120)
Architecture
:
Irregular
(1120)
Topology
:
Dihydrolipoamide Transferase
(20)
Homologous Superfamily
:
Dihydrolipoamide Transferase
(20)
Human (Homo sapiens)
(2)
3a
1zy8K00
K:130-173
3b
1zy8L00
L:130-173
3c
1zy8M00
M:130-173
3d
1zy8N00
N:130-173
3e
1zy8O00
O:130-173
[
close CATH info
]
Pfam Domains
(4, 35)
Info
all PFAM domains
1a: PFAM_Pyr_redox_1zy8J01 (J:180-264)
1b: PFAM_Pyr_redox_1zy8J02 (J:180-264)
1c: PFAM_Pyr_redox_1zy8J03 (J:180-264)
1d: PFAM_Pyr_redox_1zy8J04 (J:180-264)
1e: PFAM_Pyr_redox_1zy8J05 (J:180-264)
1f: PFAM_Pyr_redox_1zy8J06 (J:180-264)
1g: PFAM_Pyr_redox_1zy8J07 (J:180-264)
1h: PFAM_Pyr_redox_1zy8J08 (J:180-264)
1i: PFAM_Pyr_redox_1zy8J09 (J:180-264)
1j: PFAM_Pyr_redox_1zy8J10 (J:180-264)
2a: PFAM_Pyr_redox_2_1zy8J11 (J:8-326)
2b: PFAM_Pyr_redox_2_1zy8J12 (J:8-326)
2c: PFAM_Pyr_redox_2_1zy8J13 (J:8-326)
2d: PFAM_Pyr_redox_2_1zy8J14 (J:8-326)
2e: PFAM_Pyr_redox_2_1zy8J15 (J:8-326)
2f: PFAM_Pyr_redox_2_1zy8J16 (J:8-326)
2g: PFAM_Pyr_redox_2_1zy8J17 (J:8-326)
2h: PFAM_Pyr_redox_2_1zy8J18 (J:8-326)
2i: PFAM_Pyr_redox_2_1zy8J19 (J:8-326)
2j: PFAM_Pyr_redox_2_1zy8J20 (J:8-326)
3a: PFAM_E3_binding_1zy8O01 (O:130-165)
3b: PFAM_E3_binding_1zy8O02 (O:130-165)
3c: PFAM_E3_binding_1zy8O03 (O:130-165)
3d: PFAM_E3_binding_1zy8O04 (O:130-165)
3e: PFAM_E3_binding_1zy8O05 (O:130-165)
4a: PFAM_Pyr_redox_dim_1zy8J21 (J:354-463)
4b: PFAM_Pyr_redox_dim_1zy8J22 (J:354-463)
4c: PFAM_Pyr_redox_dim_1zy8J23 (J:354-463)
4d: PFAM_Pyr_redox_dim_1zy8J24 (J:354-463)
4e: PFAM_Pyr_redox_dim_1zy8J25 (J:354-463)
4f: PFAM_Pyr_redox_dim_1zy8J26 (J:354-463)
4g: PFAM_Pyr_redox_dim_1zy8J27 (J:354-463)
4h: PFAM_Pyr_redox_dim_1zy8J28 (J:354-463)
4i: PFAM_Pyr_redox_dim_1zy8J29 (J:354-463)
4j: PFAM_Pyr_redox_dim_1zy8J30 (J:354-463)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
NADP_Rossmann
(1239)
Family
:
Pyr_redox
(62)
Homo sapiens (Human)
(8)
1a
Pyr_redox-1zy8J01
J:180-264
1b
Pyr_redox-1zy8J02
J:180-264
1c
Pyr_redox-1zy8J03
J:180-264
1d
Pyr_redox-1zy8J04
J:180-264
1e
Pyr_redox-1zy8J05
J:180-264
1f
Pyr_redox-1zy8J06
J:180-264
1g
Pyr_redox-1zy8J07
J:180-264
1h
Pyr_redox-1zy8J08
J:180-264
1i
Pyr_redox-1zy8J09
J:180-264
1j
Pyr_redox-1zy8J10
J:180-264
Family
:
Pyr_redox_2
(69)
Homo sapiens (Human)
(8)
2a
Pyr_redox_2-1zy8J11
J:8-326
2b
Pyr_redox_2-1zy8J12
J:8-326
2c
Pyr_redox_2-1zy8J13
J:8-326
2d
Pyr_redox_2-1zy8J14
J:8-326
2e
Pyr_redox_2-1zy8J15
J:8-326
2f
Pyr_redox_2-1zy8J16
J:8-326
2g
Pyr_redox_2-1zy8J17
J:8-326
2h
Pyr_redox_2-1zy8J18
J:8-326
2i
Pyr_redox_2-1zy8J19
J:8-326
2j
Pyr_redox_2-1zy8J20
J:8-326
Clan
:
no clan defined [family: E3_binding]
(14)
Family
:
E3_binding
(14)
Homo sapiens (Human)
(3)
3a
E3_binding-1zy8O01
O:130-165
3b
E3_binding-1zy8O02
O:130-165
3c
E3_binding-1zy8O03
O:130-165
3d
E3_binding-1zy8O04
O:130-165
3e
E3_binding-1zy8O05
O:130-165
Clan
:
no clan defined [family: Pyr_redox_dim]
(44)
Family
:
Pyr_redox_dim
(44)
Homo sapiens (Human)
(7)
4a
Pyr_redox_dim-1zy8J21
J:354-463
4b
Pyr_redox_dim-1zy8J22
J:354-463
4c
Pyr_redox_dim-1zy8J23
J:354-463
4d
Pyr_redox_dim-1zy8J24
J:354-463
4e
Pyr_redox_dim-1zy8J25
J:354-463
4f
Pyr_redox_dim-1zy8J26
J:354-463
4g
Pyr_redox_dim-1zy8J27
J:354-463
4h
Pyr_redox_dim-1zy8J28
J:354-463
4i
Pyr_redox_dim-1zy8J29
J:354-463
4j
Pyr_redox_dim-1zy8J30
J:354-463
[
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