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1ZSY
Asym. Unit
Info
Asym.Unit (67 KB)
Biol.Unit 1 (123 KB)
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(1)
Title
:
THE STRUCTURE OF HUMAN MITOCHONDRIAL 2-ENOYL THIOESTER REDUCTASE (CGI-63)
Authors
:
P. Lukacik, N. Shafqat, K. L. Kavanagh, C. Johansson, C. Smee, A. Edward C. Arrowsmith, M. Sundstrom, F. Von Delft, U. Oppermann, Structural Consortium (Sgc)
Date
:
25 May 05 (Deposition) - 07 Jun 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Medium-Chain Dehydrogenase/Reductase, Oxidoreductase, 2-Enoyl Thioester Reductase, Fatty Acid Synthesis (Type 2), Structural Genomics, Structural Genomics Consortium, Sgc
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Lukacik, N. Shafqat, K. L. Kavanagh, C. Johansson, C. Smee, A. Edwards, C. Arrowsmith, M. Sundstrom, F. Von Delft, U. Oppermann
The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi-63)
To Be Published
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
2a: SULFATE ION (SO4a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
3
Ligand/Ion
GLYCEROL
2
SO4
1
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:175 , SER A:176 , ASN A:177 , SER A:178 , VAL A:199 , ARG A:200 , ARG A:202 , HOH A:581 , HOH A:724
BINDING SITE FOR RESIDUE SO4 A 500
2
AC2
SOFTWARE
PRO A:68 , ASN A:151 , SER A:178 , GLY A:179 , VAL A:180 , LYS A:352 , HOH A:548 , HOH A:564 , HOH A:772
BINDING SITE FOR RESIDUE GOL A 501
3
AC3
SOFTWARE
ASN A:17 , GLN A:166 , PRO A:167 , GLY A:168 , ASP A:169 , HOH A:640 , HOH A:757
BINDING SITE FOR RESIDUE GOL A 502
4
AC4
SOFTWARE
HIS A:34 , HIS A:35
BINDING SITE FOR RESIDUE GOL A 503
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_027935 (L80L, chain A, )
2: VAR_055486 (R211K, chain A, )
3: VAR_055487 (R242L, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_027935
F
96
L
MECR_HUMAN
Polymorphism
1128400
A
L
80
L
2
UniProt
VAR_055486
R
227
K
MECR_HUMAN
Polymorphism
11544658
A
R
211
K
3
UniProt
VAR_055487
R
258
L
MECR_HUMAN
Polymorphism
34835902
A
R
242
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(10, 10)
Info
All Exons
Exon 1.1b (A:11-43)
Exon 1.7c (A:43-76)
Exon 1.8c (A:76-120)
Exon 1.9c (A:120-168)
Exon 1.10d (A:168-202)
Exon 1.11b (A:202-236)
Exon 1.13a (A:237-261)
Exon 1.14a (A:261-281)
Exon 1.14f (A:282-306)
Exon 1.15d (A:306-357)
View:
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All Exon Boundaries
01: Boundary -/1.1b
02: Boundary 1.1b/1.7c
03: Boundary 1.7c/1.8c
04: Boundary 1.8c/1.9c
05: Boundary 1.9c/1.10d
06: Boundary 1.10d/1.11b
07: Boundary 1.11b/1.13a
08: Boundary 1.13a/1.14a
09: Boundary 1.14a/1.14f
10: Boundary 1.14f/1.15d
11: Boundary 1.15d/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000263702
1b
ENSE00001897993
chr1:
29557444-29557243
202
MECR_HUMAN
1-59
59
1
A:11-43
33
1.7c
ENST00000263702
7c
ENSE00001694933
chr1:
29543197-29543100
98
MECR_HUMAN
59-92
34
1
A:43-76
34
1.8c
ENST00000263702
8c
ENSE00000956360
chr1:
29542648-29542517
132
MECR_HUMAN
92-136
45
1
A:76-120
45
1.9c
ENST00000263702
9c
ENSE00001065053
chr1:
29533417-29533274
144
MECR_HUMAN
136-184
49
1
A:120-168
49
1.10d
ENST00000263702
10d
ENSE00000956362
chr1:
29529745-29529643
103
MECR_HUMAN
184-218
35
1
A:168-202
35
1.11b
ENST00000263702
11b
ENSE00000956363
chr1:
29528557-29528455
103
MECR_HUMAN
218-252
35
1
A:202-236
35
1.13a
ENST00000263702
13a
ENSE00001757446
chr1:
29527101-29527028
74
MECR_HUMAN
253-277
25
1
A:237-261
25
1.14a
ENST00000263702
14a
ENSE00001681965
chr1:
29522770-29522710
61
MECR_HUMAN
277-297
21
1
A:261-281
21
1.14f
ENST00000263702
14f
ENSE00001694907
chr1:
29522525-29522453
73
MECR_HUMAN
298-322
25
1
A:282-306
25
1.15d
ENST00000263702
15d
ENSE00001829391
chr1:
29520691-29520329
363
MECR_HUMAN
322-373
52
1
A:306-357
52
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SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Sorry, no Info available
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1zsyA02 (A:149-325)
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Classes
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Topologies
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Human (Homo sapiens)
(188)
1a
1zsyA02
A:149-325
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_ADH_N_1zsyA01 (A:54-127)
2a: PFAM_ADH_zinc_N_1zsyA02 (A:179-315)
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Clans
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Families
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(
)
Organisms
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)
(
)
Clan
:
GroES
(70)
Family
:
ADH_N
(62)
Homo sapiens (Human)
(18)
1a
ADH_N-1zsyA01
A:54-127
Clan
:
NADP_Rossmann
(1239)
Family
:
ADH_zinc_N
(75)
Homo sapiens (Human)
(24)
2a
ADH_zinc_N-1zsyA02
A:179-315
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Chain A
Asymmetric Unit 1
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