PLEASE WAIT...
Getting 'Biological Unit' information from database.
PLEASE WAIT...
Getting 'Hetero Component' information from database.
PLEASE WAIT...
Getting 'Site' information from database.
PLEASE WAIT...
No precomputed SNP/Variant structure found.
Calculating the structure may take several minutes.
PLEASE WAIT...
Getting 'PROSITE' information from database.
1ZPU
Biol. Unit 1
Info
Asym.Unit (567 KB)
Biol.Unit 1 (101 KB)
Biol.Unit 2 (101 KB)
Biol.Unit 3 (101 KB)
Biol.Unit 4 (100 KB)
Biol.Unit 5 (100 KB)
Biol.Unit 6 (100 KB)
(using Jmol or JSmol)
spin
show selected part
auto zoom/center
Standard Views
(
Basic
|
Advanced
Interface
)
(
Basic
|
Advanced
Interface
)
Help
(1)
Title
:
CRYSTAL STRUCTURE OF FET3P, A MULTICOPPER OXIDASE THAT FUNCTIONS IN IRON IMPORT
Authors
:
A. B. Taylor, C. S. Stoj, L. Ziegler, D. J. Kosman, P. J. Hart
Date
:
17 May 05 (Deposition) - 04 Oct 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Keywords
:
Multicopper Oxidase, Ferroxidase, Iron Transport, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. B. Taylor, C. S. Stoj, L. Ziegler, D. J. Kosman, P. J. Hart
The Copper-Iron Connection In Biology: Structure Of The Metallo-Oxidase Fet3P.
Proc. Natl. Acad. Sci. Usa V. 102 15459 2005
[
close entry info
]
Hetero Components
(5, 33)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
1d: BETA-D-MANNOSE (BMAd)
1e: BETA-D-MANNOSE (BMAe)
1f: BETA-D-MANNOSE (BMAf)
1g: BETA-D-MANNOSE (BMAg)
1h: BETA-D-MANNOSE (BMAh)
1i: BETA-D-MANNOSE (BMAi)
1j: BETA-D-MANNOSE (BMAj)
1k: BETA-D-MANNOSE (BMAk)
1l: BETA-D-MANNOSE (BMAl)
1m: BETA-D-MANNOSE (BMAm)
1n: BETA-D-MANNOSE (BMAn)
1o: BETA-D-MANNOSE (BMAo)
1p: BETA-D-MANNOSE (BMAp)
1q: BETA-D-MANNOSE (BMAq)
1r: BETA-D-MANNOSE (BMAr)
1s: BETA-D-MANNOSE (BMAs)
1t: BETA-D-MANNOSE (BMAt)
1u: BETA-D-MANNOSE (BMAu)
1v: BETA-D-MANNOSE (BMAv)
1w: BETA-D-MANNOSE (BMAw)
1x: BETA-D-MANNOSE (BMAx)
1y: BETA-D-MANNOSE (BMAy)
1z: BETA-D-MANNOSE (BMAz)
2a: COPPER (I) ION (CU1a)
2b: COPPER (I) ION (CU1b)
2c: COPPER (I) ION (CU1c)
2d: COPPER (I) ION (CU1d)
2e: COPPER (I) ION (CU1e)
2f: COPPER (I) ION (CU1f)
2g: COPPER (I) ION (CU1g)
2h: COPPER (I) ION (CU1h)
2i: COPPER (I) ION (CU1i)
2j: COPPER (I) ION (CU1j)
2k: COPPER (I) ION (CU1k)
2l: COPPER (I) ION (CU1l)
2m: COPPER (I) ION (CU1m)
2n: COPPER (I) ION (CU1n)
2o: COPPER (I) ION (CU1o)
2p: COPPER (I) ION (CU1p)
2q: COPPER (I) ION (CU1q)
2r: COPPER (I) ION (CU1r)
2s: COPPER (I) ION (CU1s)
2t: COPPER (I) ION (CU1t)
2u: COPPER (I) ION (CU1u)
2v: COPPER (I) ION (CU1v)
2w: COPPER (I) ION (CU1w)
2x: COPPER (I) ION (CU1x)
3a: ALPHA-D-MANNOSE (MANa)
3aa: ALPHA-D-MANNOSE (MANaa)
3ab: ALPHA-D-MANNOSE (MANab)
3ac: ALPHA-D-MANNOSE (MANac)
3ad: ALPHA-D-MANNOSE (MANad)
3ae: ALPHA-D-MANNOSE (MANae)
3af: ALPHA-D-MANNOSE (MANaf)
3ag: ALPHA-D-MANNOSE (MANag)
3ah: ALPHA-D-MANNOSE (MANah)
3ai: ALPHA-D-MANNOSE (MANai)
3aj: ALPHA-D-MANNOSE (MANaj)
3ak: ALPHA-D-MANNOSE (MANak)
3al: ALPHA-D-MANNOSE (MANal)
3am: ALPHA-D-MANNOSE (MANam)
3an: ALPHA-D-MANNOSE (MANan)
3ao: ALPHA-D-MANNOSE (MANao)
3ap: ALPHA-D-MANNOSE (MANap)
3aq: ALPHA-D-MANNOSE (MANaq)
3ar: ALPHA-D-MANNOSE (MANar)
3as: ALPHA-D-MANNOSE (MANas)
3b: ALPHA-D-MANNOSE (MANb)
3c: ALPHA-D-MANNOSE (MANc)
3d: ALPHA-D-MANNOSE (MANd)
3e: ALPHA-D-MANNOSE (MANe)
3f: ALPHA-D-MANNOSE (MANf)
3g: ALPHA-D-MANNOSE (MANg)
3h: ALPHA-D-MANNOSE (MANh)
3i: ALPHA-D-MANNOSE (MANi)
3j: ALPHA-D-MANNOSE (MANj)
3k: ALPHA-D-MANNOSE (MANk)
3l: ALPHA-D-MANNOSE (MANl)
3m: ALPHA-D-MANNOSE (MANm)
3n: ALPHA-D-MANNOSE (MANn)
3o: ALPHA-D-MANNOSE (MANo)
3p: ALPHA-D-MANNOSE (MANp)
3q: ALPHA-D-MANNOSE (MANq)
3r: ALPHA-D-MANNOSE (MANr)
3s: ALPHA-D-MANNOSE (MANs)
3t: ALPHA-D-MANNOSE (MANt)
3u: ALPHA-D-MANNOSE (MANu)
3v: ALPHA-D-MANNOSE (MANv)
3w: ALPHA-D-MANNOSE (MANw)
3x: ALPHA-D-MANNOSE (MANx)
3y: ALPHA-D-MANNOSE (MANy)
3z: ALPHA-D-MANNOSE (MANz)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4aa: N-ACETYL-D-GLUCOSAMINE (NAGaa)
4ab: N-ACETYL-D-GLUCOSAMINE (NAGab)
4ac: N-ACETYL-D-GLUCOSAMINE (NAGac)
4ad: N-ACETYL-D-GLUCOSAMINE (NAGad)
4ae: N-ACETYL-D-GLUCOSAMINE (NAGae)
4af: N-ACETYL-D-GLUCOSAMINE (NAGaf)
4ag: N-ACETYL-D-GLUCOSAMINE (NAGag)
4ah: N-ACETYL-D-GLUCOSAMINE (NAGah)
4ai: N-ACETYL-D-GLUCOSAMINE (NAGai)
4aj: N-ACETYL-D-GLUCOSAMINE (NAGaj)
4ak: N-ACETYL-D-GLUCOSAMINE (NAGak)
4al: N-ACETYL-D-GLUCOSAMINE (NAGal)
4am: N-ACETYL-D-GLUCOSAMINE (NAGam)
4an: N-ACETYL-D-GLUCOSAMINE (NAGan)
4ao: N-ACETYL-D-GLUCOSAMINE (NAGao)
4ap: N-ACETYL-D-GLUCOSAMINE (NAGap)
4aq: N-ACETYL-D-GLUCOSAMINE (NAGaq)
4ar: N-ACETYL-D-GLUCOSAMINE (NAGar)
4as: N-ACETYL-D-GLUCOSAMINE (NAGas)
4at: N-ACETYL-D-GLUCOSAMINE (NAGat)
4au: N-ACETYL-D-GLUCOSAMINE (NAGau)
4av: N-ACETYL-D-GLUCOSAMINE (NAGav)
4aw: N-ACETYL-D-GLUCOSAMINE (NAGaw)
4ax: N-ACETYL-D-GLUCOSAMINE (NAGax)
4ay: N-ACETYL-D-GLUCOSAMINE (NAGay)
4az: N-ACETYL-D-GLUCOSAMINE (NAGaz)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4ba: N-ACETYL-D-GLUCOSAMINE (NAGba)
4bb: N-ACETYL-D-GLUCOSAMINE (NAGbb)
4bc: N-ACETYL-D-GLUCOSAMINE (NAGbc)
4bd: N-ACETYL-D-GLUCOSAMINE (NAGbd)
4be: N-ACETYL-D-GLUCOSAMINE (NAGbe)
4bf: N-ACETYL-D-GLUCOSAMINE (NAGbf)
4bg: N-ACETYL-D-GLUCOSAMINE (NAGbg)
4bh: N-ACETYL-D-GLUCOSAMINE (NAGbh)
4bi: N-ACETYL-D-GLUCOSAMINE (NAGbi)
4bj: N-ACETYL-D-GLUCOSAMINE (NAGbj)
4bk: N-ACETYL-D-GLUCOSAMINE (NAGbk)
4bl: N-ACETYL-D-GLUCOSAMINE (NAGbl)
4bm: N-ACETYL-D-GLUCOSAMINE (NAGbm)
4bn: N-ACETYL-D-GLUCOSAMINE (NAGbn)
4bo: N-ACETYL-D-GLUCOSAMINE (NAGbo)
4bp: N-ACETYL-D-GLUCOSAMINE (NAGbp)
4bq: N-ACETYL-D-GLUCOSAMINE (NAGbq)
4br: N-ACETYL-D-GLUCOSAMINE (NAGbr)
4bs: N-ACETYL-D-GLUCOSAMINE (NAGbs)
4bt: N-ACETYL-D-GLUCOSAMINE (NAGbt)
4bu: N-ACETYL-D-GLUCOSAMINE (NAGbu)
4bv: N-ACETYL-D-GLUCOSAMINE (NAGbv)
4bw: N-ACETYL-D-GLUCOSAMINE (NAGbw)
4bx: N-ACETYL-D-GLUCOSAMINE (NAGbx)
4by: N-ACETYL-D-GLUCOSAMINE (NAGby)
4bz: N-ACETYL-D-GLUCOSAMINE (NAGbz)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4ca: N-ACETYL-D-GLUCOSAMINE (NAGca)
4cb: N-ACETYL-D-GLUCOSAMINE (NAGcb)
4cc: N-ACETYL-D-GLUCOSAMINE (NAGcc)
4cd: N-ACETYL-D-GLUCOSAMINE (NAGcd)
4ce: N-ACETYL-D-GLUCOSAMINE (NAGce)
4cf: N-ACETYL-D-GLUCOSAMINE (NAGcf)
4cg: N-ACETYL-D-GLUCOSAMINE (NAGcg)
4ch: N-ACETYL-D-GLUCOSAMINE (NAGch)
4ci: N-ACETYL-D-GLUCOSAMINE (NAGci)
4cj: N-ACETYL-D-GLUCOSAMINE (NAGcj)
4ck: N-ACETYL-D-GLUCOSAMINE (NAGck)
4cl: N-ACETYL-D-GLUCOSAMINE (NAGcl)
4cm: N-ACETYL-D-GLUCOSAMINE (NAGcm)
4cn: N-ACETYL-D-GLUCOSAMINE (NAGcn)
4co: N-ACETYL-D-GLUCOSAMINE (NAGco)
4cp: N-ACETYL-D-GLUCOSAMINE (NAGcp)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
4f: N-ACETYL-D-GLUCOSAMINE (NAGf)
4g: N-ACETYL-D-GLUCOSAMINE (NAGg)
4h: N-ACETYL-D-GLUCOSAMINE (NAGh)
4i: N-ACETYL-D-GLUCOSAMINE (NAGi)
4j: N-ACETYL-D-GLUCOSAMINE (NAGj)
4k: N-ACETYL-D-GLUCOSAMINE (NAGk)
4l: N-ACETYL-D-GLUCOSAMINE (NAGl)
4m: N-ACETYL-D-GLUCOSAMINE (NAGm)
4n: N-ACETYL-D-GLUCOSAMINE (NAGn)
4o: N-ACETYL-D-GLUCOSAMINE (NAGo)
4p: N-ACETYL-D-GLUCOSAMINE (NAGp)
4q: N-ACETYL-D-GLUCOSAMINE (NAGq)
4r: N-ACETYL-D-GLUCOSAMINE (NAGr)
4s: N-ACETYL-D-GLUCOSAMINE (NAGs)
4t: N-ACETYL-D-GLUCOSAMINE (NAGt)
4u: N-ACETYL-D-GLUCOSAMINE (NAGu)
4v: N-ACETYL-D-GLUCOSAMINE (NAGv)
4w: N-ACETYL-D-GLUCOSAMINE (NAGw)
4x: N-ACETYL-D-GLUCOSAMINE (NAGx)
4y: N-ACETYL-D-GLUCOSAMINE (NAGy)
4z: N-ACETYL-D-GLUCOSAMINE (NAGz)
5a: 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOP... (NDGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
5
Ligand/Ion
BETA-D-MANNOSE
2
CU1
4
Ligand/Ion
COPPER (I) ION
3
MAN
7
Ligand/Ion
ALPHA-D-MANNOSE
4
NAG
16
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
NDG
1
Ligand/Ion
2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
[
close Hetero Component info
]
Sites
(34, 34)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: JC6 (SOFTWARE)
31: SC5 (SOFTWARE)
32: SC6 (SOFTWARE)
33: SC7 (SOFTWARE)
34: SC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:56 , SER A:157 , ASN A:194 , THR A:200 , NAG A:2002
BINDING SITE FOR RESIDUE NAG A 2001
02
AC2
SOFTWARE
GLU A:155 , SER A:157 , NAG A:2001 , BMA A:3001
BINDING SITE FOR RESIDUE NAG A 2002
03
AC3
SOFTWARE
NAG A:2002 , MAN A:3007 , MAN A:3008
BINDING SITE FOR RESIDUE BMA A 3001
04
AC4
SOFTWARE
BMA A:3001
BINDING SITE FOR RESIDUE MAN A 3007
05
AC5
SOFTWARE
BMA A:3001
BINDING SITE FOR RESIDUE MAN A 3008
06
AC6
SOFTWARE
ASP A:38 , GLY A:39 , MET A:197 , ASN A:198 , NAG A:2004
BINDING SITE FOR RESIDUE NAG A 2003
07
AC7
SOFTWARE
GLY A:39 , LEU A:40 , NAG A:2003 , BMA A:3004 , MAN A:3010 , MAN A:3011
BINDING SITE FOR RESIDUE NAG A 2004
08
AC8
SOFTWARE
NAG A:2004 , MAN A:3009 , MAN A:3010
BINDING SITE FOR RESIDUE BMA A 3004
09
AC9
SOFTWARE
BMA A:3004
BINDING SITE FOR RESIDUE MAN A 3009
10
BC1
SOFTWARE
ASP A:288 , NAG A:2004 , BMA A:3004 , MAN A:3011
BINDING SITE FOR RESIDUE MAN A 3010
11
BC2
SOFTWARE
LEU A:40 , GLN A:189 , ASN A:190 , ASP A:288 , GLN A:290 , NAG A:2004 , MAN A:3010
BINDING SITE FOR RESIDUE MAN A 3011
12
BC3
SOFTWARE
LYS A:243 , ASN A:244 , LEU A:318 , TYR A:322 , GLN A:324 , NAG A:2015
BINDING SITE FOR RESIDUE NAG A 2005
13
BC4
SOFTWARE
NAG A:2005
BINDING SITE FOR RESIDUE NAG A 2015
14
BC5
SOFTWARE
ASN A:27 , TYR A:68
BINDING SITE FOR RESIDUE NAG A 2006
15
BC6
SOFTWARE
ASN A:77 , PHE A:98 , ASP A:130 , NAG A:2013
BINDING SITE FOR RESIDUE NAG A 2007
16
BC7
SOFTWARE
SER A:525 , NAG A:2007 , BMA A:3003 , MAN A:3006
BINDING SITE FOR RESIDUE NAG A 2013
17
BC8
SOFTWARE
NAG A:2013 , MAN A:3005 , MAN A:3006
BINDING SITE FOR RESIDUE BMA A 3003
18
BC9
SOFTWARE
THR A:543 , GLY A:544 , BMA A:3003
BINDING SITE FOR RESIDUE MAN A 3005
19
CC1
SOFTWARE
NAG A:2013 , BMA A:3003
BINDING SITE FOR RESIDUE MAN A 3006
20
CC2
SOFTWARE
PHE A:86 , ASN A:88 , TYR A:118 , ASP A:475 , ASN A:476
BINDING SITE FOR RESIDUE NAG A 2008
21
CC3
SOFTWARE
ARG A:64 , GLN A:66 , ASN A:113 , NAG A:2016
BINDING SITE FOR RESIDUE NAG A 2009
22
CC4
SOFTWARE
ARG A:64 , NAG A:2009 , BMA A:3013
BINDING SITE FOR RESIDUE NAG A 2016
23
CC5
SOFTWARE
NAG A:2016
BINDING SITE FOR RESIDUE BMA A 3013
24
CC6
SOFTWARE
LYS A:276 , ASN A:292 , GLN A:308 , TYR A:310 , VAL A:311 , NAG A:2011
BINDING SITE FOR RESIDUE NAG A 2010
25
CC7
SOFTWARE
VAL A:311 , ASP A:312 , NAG A:2010 , BMA A:3002
BINDING SITE FOR RESIDUE NAG A 2011
26
CC8
SOFTWARE
ASP A:312 , NAG A:2011
BINDING SITE FOR RESIDUE BMA A 3002
27
CC9
SOFTWARE
ASN A:359 , GLU A:545
BINDING SITE FOR RESIDUE NAG A 2012
28
DC1
SOFTWARE
THR A:267 , ASN A:300 , THR A:302 , ALA A:303 , ASP B:56
BINDING SITE FOR RESIDUE NAG A 2014
29
DC2
SOFTWARE
ASN A:381 , GLU A:396
BINDING SITE FOR RESIDUE NDG A 2018
30
JC6
SOFTWARE
PRO A:55 , ASP A:56 , THR C:267 , ASN C:300 , THR C:302 , ALA C:303
BINDING SITE FOR RESIDUE NAG C 2014
31
SC5
SOFTWARE
HIS A:413 , CYS A:484 , ILE A:486 , HIS A:489
BINDING SITE FOR RESIDUE CU1 A 1001
32
SC6
SOFTWARE
HIS A:128 , HIS A:418 , HIS A:483
BINDING SITE FOR RESIDUE CU1 A 1002
33
SC7
SOFTWARE
HIS A:83 , HIS A:126 , HIS A:485
BINDING SITE FOR RESIDUE CU1 A 1003
34
SC8
SOFTWARE
HIS A:81 , HIS A:83 , HIS A:416 , HIS A:418
BINDING SITE FOR RESIDUE CU1 A 1004
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 3)
Info
All PROSITE Patterns/Profiles
1: MULTICOPPER_OXIDASE1 (A:121-141,A:478-498)
2: MULTICOPPER_OXIDASE2 (A:483-494)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MULTICOPPER_OXIDASE1
PS00079
Multicopper oxidases signature 1.
FET3_YEAST
121-141
478-498
2
A:121-141
-
-
-
-
-
A:478-498
-
-
-
-
-
2
MULTICOPPER_OXIDASE2
PS00080
Multicopper oxidases signature 2.
FET3_YEAST
483-494
1
A:483-494
-
-
-
-
-
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_1zpuA01 (A:22-147)
1b: CATH_1zpuB01 (B:22-147)
1c: CATH_1zpuC01 (C:22-147)
1d: CATH_1zpuD01 (D:22-147)
1e: CATH_1zpuE01 (E:22-147)
1f: CATH_1zpuF01 (F:22-147)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Cupredoxins - blue copper proteins
(420)
Baker's yeast (Saccharomyces cerevisiae)
(1)
1a
1zpuA01
A:22-147
1b
1zpuB01
B:22-147
1c
1zpuC01
C:22-147
1d
1zpuD01
D:22-147
1e
1zpuE01
E:22-147
1f
1zpuF01
F:22-147
[
close CATH info
]
Pfam Domains
(3, 18)
Info
all PFAM domains
1a: PFAM_Cu_oxidase_1zpuF01 (F:154-302)
1b: PFAM_Cu_oxidase_1zpuF02 (F:154-302)
1c: PFAM_Cu_oxidase_1zpuF03 (F:154-302)
1d: PFAM_Cu_oxidase_1zpuF04 (F:154-302)
1e: PFAM_Cu_oxidase_1zpuF05 (F:154-302)
1f: PFAM_Cu_oxidase_1zpuF06 (F:154-302)
2a: PFAM_Cu_oxidase_2_1zpuF07 (F:362-504)
2b: PFAM_Cu_oxidase_2_1zpuF08 (F:362-504)
2c: PFAM_Cu_oxidase_2_1zpuF09 (F:362-504)
2d: PFAM_Cu_oxidase_2_1zpuF10 (F:362-504)
2e: PFAM_Cu_oxidase_2_1zpuF11 (F:362-504)
2f: PFAM_Cu_oxidase_2_1zpuF12 (F:362-504)
3a: PFAM_Cu_oxidase_3_1zpuF13 (F:29-148)
3b: PFAM_Cu_oxidase_3_1zpuF14 (F:29-148)
3c: PFAM_Cu_oxidase_3_1zpuF15 (F:29-148)
3d: PFAM_Cu_oxidase_3_1zpuF16 (F:29-148)
3e: PFAM_Cu_oxidase_3_1zpuF17 (F:29-148)
3f: PFAM_Cu_oxidase_3_1zpuF18 (F:29-148)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
CU_oxidase
(192)
Family
:
Cu-oxidase
(74)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(1)
1a
Cu-oxidase-1zpuF01
F:154-302
1b
Cu-oxidase-1zpuF02
F:154-302
1c
Cu-oxidase-1zpuF03
F:154-302
1d
Cu-oxidase-1zpuF04
F:154-302
1e
Cu-oxidase-1zpuF05
F:154-302
1f
Cu-oxidase-1zpuF06
F:154-302
Family
:
Cu-oxidase_2
(24)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(1)
2a
Cu-oxidase_2-1zpuF07
F:362-504
2b
Cu-oxidase_2-1zpuF08
F:362-504
2c
Cu-oxidase_2-1zpuF09
F:362-504
2d
Cu-oxidase_2-1zpuF10
F:362-504
2e
Cu-oxidase_2-1zpuF11
F:362-504
2f
Cu-oxidase_2-1zpuF12
F:362-504
Family
:
Cu-oxidase_3
(79)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(1)
3a
Cu-oxidase_3-1zpuF13
F:29-148
3b
Cu-oxidase_3-1zpuF14
F:29-148
3c
Cu-oxidase_3-1zpuF15
F:29-148
3d
Cu-oxidase_3-1zpuF16
F:29-148
3e
Cu-oxidase_3-1zpuF17
F:29-148
3f
Cu-oxidase_3-1zpuF18
F:29-148
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
by Custom Color
Background Coloring
Choose
molecule
background
color...
[
close
]
RGB value
(e.g.: "#3cb371" or "60,179,113")
Stereo
Graphics Window
x
pixel
Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
[
close Script example commands
]
Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
by PDB,NDB,UniProt,PROSITE Code or
Search Term(s)
Show PDB file:
Asym.Unit (567 KB)
Header - Asym.Unit
Biol.Unit 1 (101 KB)
Header - Biol.Unit 1
Biol.Unit 2 (101 KB)
Header - Biol.Unit 2
Biol.Unit 3 (101 KB)
Header - Biol.Unit 3
Biol.Unit 4 (100 KB)
Header - Biol.Unit 4
Biol.Unit 5 (100 KB)
Header - Biol.Unit 5
Biol.Unit 6 (100 KB)
Header - Biol.Unit 6
Plain Text
HTML (compressed size)
use JSmol [Javascript]
use Jmol [Java applet]
Upload:
Select a local file
OR
Enter a remote file address
You can upload any molecular structure file format that is recognized by Jmol,
e.g.: PDB, mmCif, CIF, CML, MOL, XYZ
(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
JenaLib Atlas Page
|
Sequence/Alignment View
1ZPU
Jmol Script Commands
|
Jmol Color Schemes
|
Jmol Mouse Manual
|
Jmol Wiki
controls:
collapse
expand
Home
JenaLib
Jmol Scripting
Contact
Help