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1ZPS
Asym. Unit
Info
Asym.Unit (52 KB)
Biol.Unit 1 (46 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF METHANOBACTERIUM THERMOAUTOTROPHICUM PHOSPHORIBOSYL-AMP CYCLOHYDROLASE HISI
Authors
:
J. Sivaraman, R. S. Myers, L. Boju, T. Sulea, M. Cygler, V. J. Davisson, J. D. Schrag, Montreal-Kingston Bacterial Structural Genomics Initiative (Bsgi)
Date
:
17 May 05 (Deposition) - 30 Aug 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Histidine Biosynthesis, Montreal-Kingston Bacterial Structural Genomics Initiative, Bsgi, Structural Genomics, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Sivaraman, R. S. Myers, L. Boju, T. Sulea, M. Cygler, V. J. Davisson, J. D. Schrag
Crystal Structure Of Methanobacterium Thermoautotrophicum Phosphoribosyl-Amp Cyclohydrolase Hisi.
Biochemistry V. 44 10071 2005
(for further references see the
PDB file header
)
[
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Hetero Components
(2, 24)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
1e: ACETIC ACID (ACYe)
2a: CADMIUM ION (CDa)
2b: CADMIUM ION (CDb)
2c: CADMIUM ION (CDc)
2d: CADMIUM ION (CDd)
2e: CADMIUM ION (CDe)
2f: CADMIUM ION (CDf)
2g: CADMIUM ION (CDg)
2h: CADMIUM ION (CDh)
2i: CADMIUM ION (CDi)
2j: CADMIUM ION (CDj)
2k: CADMIUM ION (CDk)
2l: CADMIUM ION (CDl)
2m: CADMIUM ION (CDm)
2n: CADMIUM ION (CDn)
2o: CADMIUM ION (CDo)
2p: CADMIUM ION (CDp)
2q: CADMIUM ION (CDq)
2r: CADMIUM ION (CDr)
2s: CADMIUM ION (CDs)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACY
5
Ligand/Ion
ACETIC ACID
2
CD
19
Ligand/Ion
CADMIUM ION
[
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]
Sites
(24, 24)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:103 , HOH A:549 , GLU B:52 , CYS B:86 , HOH B:501
BINDING SITE FOR RESIDUE CD B 2601
02
AC2
SOFTWARE
HIS B:57 , HOH B:544 , ACY B:801 , ACY B:802
BINDING SITE FOR RESIDUE CD B 2602
03
AC3
SOFTWARE
CYS A:109 , HOH A:545 , ACY A:803 , ACY A:804 , CD A:2616 , ASP B:85 , HOH B:505
BINDING SITE FOR RESIDUE CD B 2603
04
AC4
SOFTWARE
HIS B:16 , ASP B:89 , HOH B:528 , HOH B:630 , ACY B:805
BINDING SITE FOR RESIDUE CD B 2604
05
AC5
SOFTWARE
HOH A:545 , ASP B:85 , ASP B:87 , ASP B:89 , HOH B:528
BINDING SITE FOR RESIDUE CD B 2605
06
AC6
SOFTWARE
ASP A:85 , ASP A:87 , ASP A:89 , HOH A:607 , HOH B:619
BINDING SITE FOR RESIDUE CD A 2606
07
AC7
SOFTWARE
ASP A:85 , HOH A:607 , HOH A:615 , CYS B:109 , HOH B:511 , CD B:2617
BINDING SITE FOR RESIDUE CD A 2607
08
AC8
SOFTWARE
CYS A:86 , HIS B:103 , GLU B:123 , HOH B:620
BINDING SITE FOR RESIDUE CD B 2608
09
AC9
SOFTWARE
HIS B:75 , HOH B:621 , HOH B:622 , HOH B:623 , HOH B:624
BINDING SITE FOR RESIDUE CD B 2609
10
BC1
SOFTWARE
HIS A:57 , HOH A:632 , HOH A:633
BINDING SITE FOR RESIDUE CD A 2610
11
BC2
SOFTWARE
ASP A:89 , HOH A:618 , HOH B:616
BINDING SITE FOR RESIDUE CD A 2611
12
BC3
SOFTWARE
GLU B:35 , HOH B:608 , HOH B:609
BINDING SITE FOR RESIDUE CD B 2612
13
BC4
SOFTWARE
GLU A:35 , HOH A:610 , HOH A:611 , HOH A:625
BINDING SITE FOR RESIDUE CD A 2613
14
BC5
SOFTWARE
HIS A:75 , HOH A:627 , HOH A:628
BINDING SITE FOR RESIDUE CD A 2614
15
BC6
SOFTWARE
GLU B:21 , HOH B:612 , HOH B:613
BINDING SITE FOR RESIDUE CD B 2615
16
BC7
SOFTWARE
CYS A:102 , CYS A:109 , ACY A:803 , CYS B:86 , CD B:2603
BINDING SITE FOR RESIDUE CD A 2616
17
BC8
SOFTWARE
CYS A:86 , CD A:2607 , CYS B:102 , CYS B:109 , HOH B:629
BINDING SITE FOR RESIDUE CD B 2617
18
BC9
SOFTWARE
GLU A:52 , GLU A:98 , HOH A:631 , HOH A:634
BINDING SITE FOR RESIDUE CD A 2618
19
CC1
SOFTWARE
ASP A:22 , GLU A:32 , HOH A:591
BINDING SITE FOR RESIDUE CD A 2619
20
CC2
SOFTWARE
ARG A:112 , LEU B:11 , HIS B:57 , LEU B:68 , CYS B:86 , HOH B:504 , HOH B:544 , ACY B:802 , CD B:2602
BINDING SITE FOR RESIDUE ACY B 801
21
CC3
SOFTWARE
ARG A:112 , ARG B:49 , HIS B:57 , LEU B:68 , HOH B:507 , ACY B:801 , CD B:2602
BINDING SITE FOR RESIDUE ACY B 802
22
CC4
SOFTWARE
ALA A:101 , CYS A:102 , HIS A:103 , HOH A:514 , HOH A:549 , HOH A:556 , ACY A:804 , CD A:2616 , CYS B:86 , CD B:2603
BINDING SITE FOR RESIDUE ACY A 803
23
CC5
SOFTWARE
MET A:38 , VAL A:39 , TRP A:67 , CYS A:109 , HOH A:514 , HOH A:545 , ACY A:803 , CD B:2603
BINDING SITE FOR RESIDUE ACY A 804
24
CC6
SOFTWARE
ARG B:15 , HIS B:16 , ASP B:87 , ASP B:89 , CD B:2604
BINDING SITE FOR RESIDUE ACY B 805
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1zpsa1 (A:8-131)
1b: SCOP_d1zpsb_ (B:)
View:
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Classes
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
HisI-like
(1)
Superfamily
:
HisI-like
(1)
Family
:
HisI-like
(1)
Protein domain
:
Phosphoribosyl-AMP cyclohydrolase HisI
(1)
Methanobacterium thermoautotrophicum [TaxId: 145262]
(1)
1a
d1zpsa1
A:8-131
1b
d1zpsb_
B:
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_PRA_CH_1zpsB01 (B:38-112)
1b: PFAM_PRA_CH_1zpsB02 (B:38-112)
View:
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Clans
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(
)
Families
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(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: PRA-CH]
(1)
Family
:
PRA-CH
(1)
Methanobacterium thermoautotrophicum (strain Delta H)
(1)
1a
PRA-CH-1zpsB01
B:38-112
1b
PRA-CH-1zpsB02
B:38-112
[
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Asymmetric Unit 1
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (52 KB)
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