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1ZPE
Biol. Unit 4
Info
Asym.Unit (160 KB)
Biol.Unit 1 (54 KB)
Biol.Unit 2 (54 KB)
Biol.Unit 3 (54 KB)
Biol.Unit 4 (154 KB)
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(1)
Title
:
ARGINASE I COVALENTLY MODIFIED WITH BUTYLAMINE AT Q19C
Authors
:
D. M. Colleluori, R. S. Reczkowski, F. A. Emig, E. Cama, J. D. Cox, L. R. Sc K. Compher, K. Jude, S. Han, R. E. Viola, D. W. Christianson, D. E. Ash
Date
:
16 May 05 (Deposition) - 06 Dec 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: A,B,C (1x)
Keywords
:
Chemically Modified Enzyme, Hydrolase
(Keyword Search:
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Reference
:
D. M. Colleluori, R. S. Reczkowski, F. A. Emig, E. Cama, J. D. Cox, L. R. Scolnick, K. Compher, K. Jude, S. Han, R. E. Viola, D. W. Christianson, D. E. Ash
Probing The Role Of The Hyper-Reactive Histidine Residue Of Arginase.
Arch. Biochem. Biophys. V. 444 15 2005
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: 3-[(4-AMINOBUTYL)SULFINYL]-2-IMINO... (BBCa)
1b: 3-[(4-AMINOBUTYL)SULFINYL]-2-IMINO... (BBCb)
1c: 3-[(4-AMINOBUTYL)SULFINYL]-2-IMINO... (BBCc)
2a: MANGANESE (II) ION (MNa)
2b: MANGANESE (II) ION (MNb)
2c: MANGANESE (II) ION (MNc)
2d: MANGANESE (II) ION (MNd)
2e: MANGANESE (II) ION (MNe)
2f: MANGANESE (II) ION (MNf)
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No.
Name
Count
Type
Full Name
1
BBC
3
Mod. Amino Acid
3-[(4-AMINOBUTYL)SULFINYL]-2-IMINOPROPAN-1-OL
2
MN
-1
Ligand/Ion
MANGANESE (II) ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:124 , HIS A:126 , ASP A:232 , ASP A:234 , MN A:502 , HOH A:503
BINDING SITE FOR RESIDUE MN A 501
2
AC2
SOFTWARE
HIS A:101 , ASP A:124 , ASP A:128 , ASP A:232 , MN A:501 , HOH A:503 , HOH A:616
BINDING SITE FOR RESIDUE MN A 502
3
AC3
SOFTWARE
ASP B:124 , HIS B:126 , ASP B:232 , ASP B:234 , MN B:504 , HOH B:511
BINDING SITE FOR RESIDUE MN B 503
4
AC4
SOFTWARE
HIS B:101 , ASP B:124 , ASP B:128 , ASP B:232 , MN B:503 , HOH B:511 , HOH B:668
BINDING SITE FOR RESIDUE MN B 504
5
AC5
SOFTWARE
ASP C:124 , HIS C:126 , ASP C:232 , ASP C:234 , MN C:506 , HOH C:513
BINDING SITE FOR RESIDUE MN C 505
6
AC6
SOFTWARE
HIS C:101 , ASP C:124 , ASP C:128 , ASP C:232 , MN C:505 , HOH C:513 , HOH C:587
BINDING SITE FOR RESIDUE MN C 506
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: ARGINASE_1 (A:230-251,B:230-251,C:230-251)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ARGINASE_1
PS01053
Arginase family signature.
ARGI1_RAT
230-251
3
A:230-251
B:230-251
C:230-251
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1zpea1 (A:6-319)
1b: SCOP_d1zpeb_ (B:)
1c: SCOP_d1zpec_ (C:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Arginase/deacetylase
(138)
Superfamily
:
Arginase/deacetylase
(138)
Family
:
Arginase-like amidino hydrolases
(97)
Protein domain
:
Arginase
(73)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(34)
1a
d1zpea1
A:6-319
1b
d1zpeb_
B:
1c
d1zpec_
C:
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1zpeA00 (A:6-319)
1b: CATH_1zpeB00 (B:6-319)
1c: CATH_1zpeC00 (C:6-319)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Arginase; Chain A
(84)
Homologous Superfamily
:
[code=3.40.800.10, no name defined]
(63)
Norway rat (Rattus norvegicus)
(31)
1a
1zpeA00
A:6-319
1b
1zpeB00
B:6-319
1c
1zpeC00
C:6-319
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Arginase_1zpeC01 (C:6-305)
1b: PFAM_Arginase_1zpeC02 (C:6-305)
1c: PFAM_Arginase_1zpeC03 (C:6-305)
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Clan
:
Arginase
(56)
Family
:
Arginase
(37)
Rattus norvegicus (Rat)
(19)
1a
Arginase-1zpeC01
C:6-305
1b
Arginase-1zpeC02
C:6-305
1c
Arginase-1zpeC03
C:6-305
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (160 KB)
Header - Asym.Unit
Biol.Unit 1 (54 KB)
Header - Biol.Unit 1
Biol.Unit 2 (54 KB)
Header - Biol.Unit 2
Biol.Unit 3 (54 KB)
Header - Biol.Unit 3
Biol.Unit 4 (154 KB)
Header - Biol.Unit 4
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