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1ZKP
Asym. Unit
Info
Asym.Unit (202 KB)
Biol.Unit 1 (98 KB)
Biol.Unit 2 (100 KB)
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(1)
Title
:
1.5A RESOLUTION CRYSTAL STRUCTURE OF A METALLO BETA LACTAMASE FAMILY PROTEIN, THE ELAC HOMOLGUE OF BACILLUS ANTHRACIS, A PUTATIVE RIBONUCLEASE
Authors
:
J. S. Brunzelle, G. Minasov, L. Shuvalova, F. R. Collart, W. F. Anderson Center For Structural Genomics (Mcsg)
Date
:
03 May 05 (Deposition) - 21 Jun 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Zinc Binding Protein, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. S. Brunzelle, G. Minasov, L. Shuvalova, F. R. Collart, W. F. Anderson, Midwest Center For Structural Genomics (Mcsg)
1. 5A Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease
To Be Published
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Hetero Components
(4, 33)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
2p: SELENOMETHIONINE (MSEp)
2q: SELENOMETHIONINE (MSEq)
2r: SELENOMETHIONINE (MSEr)
2s: SELENOMETHIONINE (MSEs)
2t: SELENOMETHIONINE (MSEt)
3a: SODIUM ION (NAa)
3b: SODIUM ION (NAb)
3c: SODIUM ION (NAc)
3d: SODIUM ION (NAd)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
4d: ZINC ION (ZNd)
4e: ZINC ION (ZNe)
4f: ZINC ION (ZNf)
4g: ZINC ION (ZNg)
4h: ZINC ION (ZNh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
MSE
20
Mod. Amino Acid
SELENOMETHIONINE
3
NA
4
Ligand/Ion
SODIUM ION
4
ZN
8
Ligand/Ion
ZINC ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:59 , HIS A:61 , HIS A:134 , ASP A:155 , ZN A:246 , HOH A:260
BINDING SITE FOR RESIDUE ZN A 245
02
AC2
SOFTWARE
ASP A:63 , HIS A:64 , ASP A:155 , HIS A:211 , ZN A:245 , HOH A:260
BINDING SITE FOR RESIDUE ZN A 246
03
AC3
SOFTWARE
HIS B:59 , HIS B:61 , HIS B:134 , ASP B:155 , ZN B:246 , HOH B:275
BINDING SITE FOR RESIDUE ZN B 245
04
AC4
SOFTWARE
ASP B:63 , HIS B:64 , ASP B:155 , HIS B:211 , ZN B:245 , HOH B:275
BINDING SITE FOR RESIDUE ZN B 246
05
AC5
SOFTWARE
HIS C:59 , HIS C:61 , HIS C:134 , ASP C:155 , ZN C:246 , HOH C:254
BINDING SITE FOR RESIDUE ZN C 245
06
AC6
SOFTWARE
ASP C:63 , HIS C:64 , ASP C:155 , HIS C:211 , ZN C:245 , HOH C:254
BINDING SITE FOR RESIDUE ZN C 246
07
AC7
SOFTWARE
HIS D:59 , HIS D:61 , HIS D:134 , ASP D:155 , ZN D:246 , HOH D:258
BINDING SITE FOR RESIDUE ZN D 245
08
AC8
SOFTWARE
ASP D:63 , HIS D:64 , ASP D:155 , HIS D:211 , ZN D:245 , HOH D:258
BINDING SITE FOR RESIDUE ZN D 246
09
AC9
SOFTWARE
ASN B:217 , PRO B:218 , ALA B:219 , HOH B:357
BINDING SITE FOR RESIDUE CL B 247
10
BC1
SOFTWARE
HOH C:265 , HOH C:270 , HOH C:315 , HOH C:327 , HOH C:388 , HOH C:439
BINDING SITE FOR RESIDUE NA C 247
11
BC2
SOFTWARE
NA B:249 , HOH B:274 , HOH B:314 , HOH B:346 , HOH B:437 , HOH B:466 , HOH B:469
BINDING SITE FOR RESIDUE NA B 248
12
BC3
SOFTWARE
NA B:248 , HOH B:265 , HOH B:346 , HOH B:469
BINDING SITE FOR RESIDUE NA B 249
13
BC4
SOFTWARE
HOH A:274 , HOH A:295 , HOH A:319 , HOH A:358 , HOH A:414 , HOH A:415
BINDING SITE FOR RESIDUE NA A 247
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1zkpa1 (A:1-244)
1b: SCOP_d1zkpb_ (B:)
1c: SCOP_d1zkpc_ (C:)
1d: SCOP_d1zkpd_ (D:)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Metallo-hydrolase/oxidoreductase
(184)
Superfamily
:
Metallo-hydrolase/oxidoreductase
(184)
Family
:
YhfI-like
(1)
Protein domain
:
Hypothetical protein BA1088 (BAS1016)
(1)
Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
(1)
1a
d1zkpa1
A:1-244
1b
d1zkpb_
B:
1c
d1zkpc_
C:
1d
d1zkpd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1zkpA00 (A:-6-244)
1b: CATH_1zkpB00 (B:-7-244)
1c: CATH_1zkpD00 (D:-6-244)
1d: CATH_1zkpC00 (C:0-244)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
4-Layer Sandwich
(459)
Topology
:
Metallo-beta-lactamase; Chain A
(92)
Homologous Superfamily
:
Metallo-beta-lactamase, chain A
(92)
Ames (Bacillus anthracis str)
(1)
1a
1zkpA00
A:-6-244
1b
1zkpB00
B:-7-244
1c
1zkpD00
D:-6-244
1d
1zkpC00
C:0-244
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Lactamase_B_2_1zkpD01 (D:29-212)
1b: PFAM_Lactamase_B_2_1zkpD02 (D:29-212)
1c: PFAM_Lactamase_B_2_1zkpD03 (D:29-212)
1d: PFAM_Lactamase_B_2_1zkpD04 (D:29-212)
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Clans
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Families
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)
Organisms
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)
(
)
Clan
:
Metallo-HOrase
(67)
Family
:
Lactamase_B_2
(12)
Bacillus anthracis
(1)
1a
Lactamase_B_2-1zkpD01
D:29-212
1b
Lactamase_B_2-1zkpD02
D:29-212
1c
Lactamase_B_2-1zkpD03
D:29-212
1d
Lactamase_B_2-1zkpD04
D:29-212
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Protein & NOT PROSITE
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Chain C
Chain D
Asymmetric Unit 1
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Asym.Unit (202 KB)
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