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1ZKC
Biol. Unit 1
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Asym.Unit (146 KB)
Biol.Unit 1 (72 KB)
Biol.Unit 2 (72 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE CYCLOPHILN_RING DOMAIN OF HUMAN PEPTIDYLPROLYL ISOMERASE (CYCLOPHILIN)-LIKE 2 ISOFORM B
Authors
:
J. R. Walker, T. Davis, E. M. Newman, F. Mackenzie, J. Weigelt, M. Sundstrom, C. Arrowsmith, A. Edwards, A. Bochkarev, S. Dhe- Paganon, Structural Genomics Consortium (Sgc)
Date
:
02 May 05 (Deposition) - 16 Aug 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Cis-Trans Isomerization, Peptidylprolyl Isomerase, Protein- Folding, Structural Genomics Consortium, Sgc
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. R. Walker, T. Davis, E. M. Newman, F. Mackenzie, J. Weigelt, M. Sundstrom, C. Arrowsmith, A. Edwards, A. Bochkarev, S. Dhe-Paganon, Structural Genomics Consortium (Sgc)
Crystal Structure Of The Human Peptidylprolyl Isomerase-Like 2 Isoform B
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
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All Hetero Components
1a: BETA-MERCAPTOETHANOL (BMEa)
1b: BETA-MERCAPTOETHANOL (BMEb)
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No.
Name
Count
Type
Full Name
1
BME
1
Ligand/Ion
BETA-MERCAPTOETHANOL
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:327 , ARG A:385 , SER A:386 , CYS A:387 , VAL A:455
BINDING SITE FOR RESIDUE BME A 638
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 2)
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1: CSA_PPIASE_2 (A:285-433)
2: CSA_PPIASE_1 (A:316-333)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CSA_PPIASE_2
PS50072
Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.
PPIL2_HUMAN
285-433
1
A:285-433
-
2
CSA_PPIASE_1
PS00170
Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.
PPIL2_HUMAN
316-333
1
A:316-333
-
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Exons
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1zkca1 (A:280-457)
1b: SCOP_d1zkcb_ (B:)
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Class
:
All beta proteins
(24004)
Fold
:
Cyclophilin-like
(169)
Superfamily
:
Cyclophilin-like
(169)
Family
:
Cyclophilin (peptidylprolyl isomerase)
(160)
Protein domain
:
Peptidyl-prolyl cis-trans isomerase-like 2, Cyclophilin-60, PPI domain
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1zkca1
A:280-457
1b
d1zkcb_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_1zkcB01 (B:279-438)
1b: CATH_1zkcA00 (A:271-457)
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Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Cyclophilin
(95)
Homologous Superfamily
:
Cyclophilin
(95)
Human (Homo sapiens)
(58)
1a
1zkcB01
B:279-438
1b
1zkcA00
A:271-457
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Pro_isomerase_1zkcB01 (B:281-433)
1b: PFAM_Pro_isomerase_1zkcB02 (B:281-433)
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Clan
:
Cyclophil-like
(65)
Family
:
Pro_isomerase
(53)
Homo sapiens (Human)
(42)
1a
Pro_isomerase-1zkcB01
B:281-433
1b
Pro_isomerase-1zkcB02
B:281-433
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Asym.Unit (146 KB)
Header - Asym.Unit
Biol.Unit 1 (72 KB)
Header - Biol.Unit 1
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