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1ZJB
Asym. Unit
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Asym.Unit (220 KB)
Biol.Unit 1 (109 KB)
Biol.Unit 2 (110 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE TREHALULOSE SYNTHASE MUTB FROM PSEUDOMONAS MESOACIDOPHILA MX-45 (MONOCLINIC FORM)
Authors
:
S. Ravaud, X. Robert, R. Haser, N. Aghajari
Date
:
28 Apr 05 (Deposition) - 17 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Trehalulose Synthase, Sucrose Isomerase, Alpha-Amylase Family, (Beta/Alpha)8 Barrel
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Ravaud, H. Watzlawick, R. Haser, R. Mattes, N. Aghajari
Expression, Purification, Crystallization And Preliminary X-Ray Crystallographic Studies Of The Trehalulose Synthase Mutb From Pseudomonas Mesoacidophila Mx-45.
Acta Crystallogr. , Sect. F V. 61 100 2005
(for further references see the
PDB file header
)
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
2a: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSa)
2b: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSb)
View:
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No.
Name
Count
Type
Full Name
1
CA
2
Ligand/Ion
CALCIUM ION
2
TRS
2
Ligand/Ion
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:22 , ASN A:24 , ASP A:26 , ILE A:28 , ASP A:30 , HOH A:4531 , HOH A:4715
BINDING SITE FOR RESIDUE CA A 7000
2
AC2
SOFTWARE
ASP B:22 , ASN B:24 , ASP B:26 , ILE B:28 , ASP B:30 , HOH B:4097 , HOH B:4405
BINDING SITE FOR RESIDUE CA B 7001
3
AC3
SOFTWARE
ASP A:61 , TYR A:64 , HIS A:104 , PHE A:145 , ASP A:200 , GLU A:254 , ARG A:414 , HOH A:4005 , HOH A:4031 , HOH A:5103 , HOH A:5420
BINDING SITE FOR RESIDUE TRS A 8000
4
AC4
SOFTWARE
ASP B:61 , TYR B:64 , HIS B:104 , PHE B:145 , ASP B:200 , GLU B:254 , ARG B:414 , HOH B:4033 , HOH B:4072 , HOH B:5780
BINDING SITE FOR RESIDUE TRS B 8001
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1zjba2 (A:479-557)
1b: SCOP_d1zjbb2 (B:479-557)
2a: SCOP_d1zjba1 (A:2-478)
2b: SCOP_d1zjbb1 (B:2-478)
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Protein Domains
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(
)
Organisms
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Glycosyl hydrolase domain
(397)
Superfamily
:
Glycosyl hydrolase domain
(397)
Family
:
automated matches
(85)
Protein domain
:
automated matches
(85)
Pseudomonas mesoacidophila [TaxId: 265293]
(9)
1a
d1zjba2
A:479-557
1b
d1zjbb2
B:479-557
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
(Trans)glycosidases
(1191)
Family
:
Amylase, catalytic domain
(385)
Protein domain
:
automated matches
(71)
Pseudomonas mesoacidophila [TaxId: 265293]
(9)
2a
d1zjba1
A:2-478
2b
d1zjbb1
B:2-478
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1zjbA01 (A:2-105,A:176-479)
1b: CATH_1zjbB01 (B:2-105,B:176-479)
2a: CATH_1zjbA02 (A:106-175)
2b: CATH_1zjbB02 (B:106-175)
3a: CATH_1zjbA03 (A:480-557)
3b: CATH_1zjbB03 (B:480-557)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Glycosidases
(843)
Pseudomonas mesoacidophila. Organism_taxid: 265293. Strain: mx-45.
(2)
1a
1zjbA01
A:2-105,A:176-479
1b
1zjbB01
B:2-105,B:176-479
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Oligo-1,6-glucosidase; domain 2
(22)
Homologous Superfamily
:
Oligo-1,6-glucosidase; Domain 2
(22)
Pseudomonas mesoacidophila. Organism_taxid: 265293. Strain: mx-45.
(2)
2a
1zjbA02
A:106-175
2b
1zjbB02
B:106-175
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Golgi alpha-mannosidase II
(346)
Pseudomonas mesoacidophila. Organism_taxid: 265293. Strain: mx-45.
(2)
3a
1zjbA03
A:480-557
3b
1zjbB03
B:480-557
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (220 KB)
Header - Asym.Unit
Biol.Unit 1 (109 KB)
Header - Biol.Unit 1
Biol.Unit 2 (110 KB)
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