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Asym. Unit
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Asym.Unit (32 KB)
Biol.Unit 1 (28 KB)
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Title
:
THE STRUCTURE OF A MINIMAL ALL-RNA HAIRPIN RIBOZYME WITH THE MUTANT G8U AT THE CLEAVAGE SITE
Authors
:
J. E. Wedekind
Date
:
20 Apr 05 (Deposition) - 14 Feb 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.38
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Hairpin Ribozyme, All-Rna, Cobalt Hexaamine, Mutation, Low Salt, S-Turn, E-Loop, Ribose Zipper, Catalytic Rna
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Salter, J. Krucinska, S. Alam, V. Grum-Tokars, J. E. Wedekind
Water In The Active Site Of An All-Rna Hairpin Ribozyme And Effects Of Gua8 Base Variants On The Geometry Of Phosphoryl Transfer.
Biochemistry V. 45 686 2006
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
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All Hetero Components
1a: COBALT HEXAMMINE(III) (NCOa)
1b: COBALT HEXAMMINE(III) (NCOb)
2a: SULFATE ION (SO4a)
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1
NCO
2
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COBALT HEXAMMINE(III)
2
SO4
1
Ligand/Ion
SULFATE ION
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3: AC3 (SOFTWARE)
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1
AC1
SOFTWARE
C A:2 , NCO B:102
BINDING SITE FOR RESIDUE SO4 A 103
2
AC2
SOFTWARE
A C:20 , G C:21 , A D:40 , U D:41
BINDING SITE FOR RESIDUE NCO D 101
3
AC3
SOFTWARE
SO4 A:103 , G B:12 , G B:13 , HOH B:105
BINDING SITE FOR RESIDUE NCO B 102
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