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1ZE7
Asym. Unit
Info
Asym.Unit (74 KB)
Biol.Unit 1 (5 KB)
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Models
(20 )
Title
:
ZINC-BINDING DOMAIN OF ALZHEIMER'S DISEASE AMYLOID BETA-PEPTIDE IN WATER SOLUTION AT PH 6.5
Authors
:
S. Zirah, S. A. Kozin, A. K. Mazur, A. Blond, M. Cheminant, I. Segalas-Mi P. Debey, S. Rebuffat
Date
:
18 Apr 05 (Deposition) - 03 May 05 (Release) - 09 Oct 13 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Biol. Unit 1: A (1x)
Keywords
:
Irregular Structure, Metal Binding Protein
(Keyword Search:
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)
Reference
:
S. Zirah, S. A. Kozin, A. K. Mazur, A. Blond, M. Cheminant, I. Segalas-Milazzo, P. Debey, S. Rebuffat
Structural Changes Of Region 1-16 Of The Alzheimer Disease Amyloid Beta-Peptide Upon Zinc Binding And In Vitro Aging.
J. Biol. Chem. V. 281 2151 2006
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
2a: AMINO GROUP (NH2a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
1
Mod. Amino Acid
ACETYL GROUP
2
NH2
1
Mod. Amino Acid
AMINO GROUP
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Sites
(1, 1)
Info
All Sites
1: AC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
GLN A:15 , LYS A:16
BINDING SITE FOR RESIDUE NH2 A 17
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_044424 (D7N, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_044424
D
678
N
A4_HUMAN
Disease (AD1)
---
A
D
7
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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End label:
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Exons
(1, 1)
Info
All Exons
Exon 1.21b (A:0-17)
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All Exon Boundaries
1: Boundary 1.20/1.21b
2: Boundary 1.21b/1.22a
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2f
ENST00000346798
2f
ENSE00001909719
chr21:
27542972-27542882
91
A4_HUMAN
1-19
19
0
-
-
1.5b
ENST00000346798
5b
ENSE00001612324
chr21:
27484463-27484296
168
A4_HUMAN
20-75
56
0
-
-
1.6b
ENST00000346798
6b
ENSE00001017345
chr21:
27462388-27462259
130
A4_HUMAN
76-119
44
0
-
-
1.7b
ENST00000346798
7b
ENSE00001726854
chr21:
27425664-27425552
113
A4_HUMAN
119-156
38
0
-
-
1.8a
ENST00000346798
8a
ENSE00001017348
chr21:
27423509-27423316
194
A4_HUMAN
157-221
65
0
-
-
1.9b
ENST00000346798
9b
ENSE00001303241
chr21:
27394358-27394156
203
A4_HUMAN
221-289
69
0
-
-
1.11
ENST00000346798
11
ENSE00001327560
chr21:
27372497-27372330
168
A4_HUMAN
289-345
57
0
-
-
1.12a
ENST00000346798
12a
ENSE00001309322
chr21:
27369731-27369675
57
A4_HUMAN
345-364
20
0
-
-
1.13
ENST00000346798
13
ENSE00001017338
chr21:
27354790-27354657
134
A4_HUMAN
364-408
45
0
-
-
1.14a
ENST00000346798
14a
ENSE00001608815
chr21:
27348341-27348267
75
A4_HUMAN
409-433
25
0
-
-
1.15b
ENST00000346798
15b
ENSE00001017350
chr21:
27347541-27347383
159
A4_HUMAN
434-486
53
0
-
-
1.16
ENST00000346798
16
ENSE00001299537
chr21:
27328069-27327941
129
A4_HUMAN
487-529
43
0
-
-
1.17
ENST00000346798
17
ENSE00001299406
chr21:
27327003-27326904
100
A4_HUMAN
530-563
34
0
-
-
1.19
ENST00000346798
19
ENSE00001299617
chr21:
27284274-27284053
222
A4_HUMAN
563-637
75
0
-
-
1.20
ENST00000346798
20
ENSE00001324614
chr21:
27277389-27277336
54
A4_HUMAN
637-655
19
0
-
-
1.21b
ENST00000346798
21b
ENSE00001318724
chr21:
27269985-27269885
101
A4_HUMAN
655-688
34
1
A:0-17
18
1.22a
ENST00000346798
22a
ENSE00001290140
chr21:
27264180-27264034
147
A4_HUMAN
689-737
49
0
-
-
1.23f
ENST00000346798
23f
ENSE00001725664
chr21:
27254082-27252861
1222
A4_HUMAN
738-770
33
0
-
-
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SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Beta_APP_1ze7A01 (A:4-16)
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Clan
:
no clan defined [family: Beta-APP]
(8)
Family
:
Beta-APP
(8)
Homo sapiens (Human)
(7)
1a
Beta-APP-1ze7A01
A:4-16
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Chain A
Asymmetric Unit 1
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Asym.Unit (74 KB)
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