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1Z84
Asym. Unit
Info
Asym.Unit (116 KB)
Biol.Unit 1 (110 KB)
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(1)
Title
:
X-RAY STRUCTURE OF GALT-LIKE PROTEIN FROM ARABIDOPSIS THALIANA AT5G18200
Authors
:
J. G. Mccoy, E. Bitto, G. N. Phillips Jr. , C. A. Bingman, Center For Eukaryotic Structural Genomics (Cesg)
Date
:
29 Mar 05 (Deposition) - 19 Apr 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.83
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Galt, Zinc, Amp, Structural Genomics, Protein Structure Initiative, Psi, Cesg, Center For Eukaryotic Structural Genomics, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. G. Mccoy, A. Arabshahi, E. Bitto, C. A. Bingman, F. J. Ruzicka, P. A. Frey, G. N. Phillips Jr.
Structure And Mechanism Of An Adp-Glucose Phosphorylase From Arabidopsis Thaliana
Biochemistry V. 45 3154 2006
(for further references see the
PDB file header
)
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Hetero Components
(3, 12)
Info
All Hetero Components
1a: ADENOSINE MONOPHOSPHATE (AMPa)
1b: ADENOSINE MONOPHOSPHATE (AMPb)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
AMP
2
Ligand/Ion
ADENOSINE MONOPHOSPHATE
2
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
3
ZN
4
Ligand/Ion
ZINC ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:63 , CYS A:66 , HIS A:133 , HIS A:184
BINDING SITE FOR RESIDUE ZN A 603
02
AC2
SOFTWARE
CYS A:216 , CYS A:219 , HIS A:255 , HIS A:310
BINDING SITE FOR RESIDUE ZN A 604
03
AC3
SOFTWARE
CYS B:63 , PHE B:65 , CYS B:66 , HIS B:133 , HIS B:184
BINDING SITE FOR RESIDUE ZN B 605
04
AC4
SOFTWARE
CYS B:216 , CYS B:219 , HIS B:255 , HIS B:310
BINDING SITE FOR RESIDUE ZN B 606
05
AC5
SOFTWARE
PHE A:65 , GLU A:72 , CYS A:73 , ALA A:74 , ILE A:92 , GLU A:93 , ASN A:94 , LEU A:95 , TYR A:96 , ASN A:173 , ALA A:180 , SER A:181 , MET A:182 , HIS A:186 , GLN A:188 , HOH A:611 , HOH A:764
BINDING SITE FOR RESIDUE AMP A 601
06
AC6
SOFTWARE
PHE B:65 , GLU B:72 , CYS B:73 , ALA B:74 , ILE B:92 , GLU B:93 , ASN B:94 , LEU B:95 , TYR B:96 , VAL B:126 , ASN B:173 , ALA B:180 , SER B:181 , MET B:182 , HIS B:186 , GLN B:188 , HOH B:630 , HOH B:679
BINDING SITE FOR RESIDUE AMP B 602
07
AC7
SOFTWARE
ALA A:242 , TYR A:244 , PRO A:245 , PHE A:246 , GLU A:247 , ASN A:334 , VAL A:336 , PRO A:338 , VAL A:341
BINDING SITE FOR RESIDUE EDO A 607
08
AC8
SOFTWARE
THR A:31 , THR A:198 , HIS A:295 , GLN A:314 , HOH A:616 , HOH A:635 , HOH A:668 , HOH A:771
BINDING SITE FOR RESIDUE EDO A 608
09
AC9
SOFTWARE
TYR A:244 , VAL A:316 , GLN A:318 , SER A:320 , HOH A:632 , HOH A:662 , HOH A:742
BINDING SITE FOR RESIDUE EDO A 609
10
BC1
SOFTWARE
ALA B:238 , ALA B:242 , TYR B:244 , PRO B:245 , PHE B:246 , GLU B:247 , ASN B:334 , VAL B:336 , PRO B:338 , VAL B:341
BINDING SITE FOR RESIDUE EDO B 610
11
BC2
SOFTWARE
THR B:31 , THR B:198 , HIS B:295 , GLN B:314 , HOH B:636 , HOH B:678 , HOH B:694 , HOH B:820
BINDING SITE FOR RESIDUE EDO B 611
12
BC3
SOFTWARE
TYR B:244 , VAL B:316 , GLN B:318 , SER B:320 , HOH B:646 , HOH B:687 , HOH B:706
BINDING SITE FOR RESIDUE EDO B 612
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1z84a1 (A:23-195)
1b: SCOP_d1z84a2 (A:196-351)
1c: SCOP_d1z84b1 (B:23-195)
1d: SCOP_d1z84b2 (B:196-350)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
HIT-like
(73)
Superfamily
:
HIT-like
(67)
Family
:
Hexose-1-phosphate uridylyltransferase
(9)
Protein domain
:
Galactose-1-phosphate uridylyltransferase
(9)
Thale cress (Arabidopsis thaliana) [TaxId: 3702]
(5)
1a
d1z84a1
A:23-195
1b
d1z84a2
A:196-351
1c
d1z84b1
B:23-195
1d
d1z84b2
B:196-350
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (116 KB)
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Header - Biol.Unit 1
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