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1Z7G
Biol. Unit 2
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Asym.Unit (142 KB)
Biol.Unit 1 (136 KB)
Biol.Unit 2 (139 KB)
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(1)
Title
:
FREE HUMAN HGPRT
Authors
:
D. T. Keough, I. M. Brereton, J. De Jersey, L. W. Guddat
Date
:
24 Mar 05 (Deposition) - 02 Aug 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (2x)
Biol. Unit 2: C,D (2x)
Keywords
:
Flexibility, Trans Cis Peptide Bond Isomerization, Nucleotide Binding, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. T. Keough, I. M. Brereton, J. De Jersey, L. W. Guddat
The Crystal Structure Of Free Human Hypoxanthine-Guanine Phosphoribosyltransferase Reveals Extensive Conformational Plasticity Throughout The Catalytic Cycle
J. Mol. Biol. V. 351 170 2005
(for further references see the
PDB file header
)
[
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
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SAPs(SNPs)/Variants
(64, 254)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_006750 (G6D, chain C/D, )
02: VAR_006751 (V7G, chain C/D, )
03: VAR_006752 (G15D, chain C/D, )
04: VAR_006753 (G15S, chain C/D, )
05: VAR_006754 (D19V, chain C/D, )
06: VAR_071610 (C22F, chain C/D, )
07: VAR_006755 (C22W, chain C/D, )
08: VAR_006756 (L40P, chain C/D, )
09: VAR_006757 (I41F, chain C/D, )
10: VAR_006758 (I41T, chain C/D, )
11: VAR_071611 (D43Y, chain C/D, )
12: VAR_006760 (R44K, chain C/D, )
13: VAR_006761 (R47H, chain C/D, )
14: VAR_006763 (A49P, chain C/D, )
15: VAR_006762 (A49V, chain C/D, )
16: VAR_006764 (R50G, chain C/D, )
17: VAR_006765 (R50P, chain C/D, )
18: VAR_006766 (D51G, chain C/D, )
19: VAR_006767 (V52A, chain C/D, )
20: VAR_006768 (V52M, chain C/D, )
21: VAR_006769 (M53L, chain C/D, )
22: VAR_006770 (M56T, chain C/D, )
23: VAR_006771 (G57R, chain C/D, )
24: VAR_071612 (H59R, chain C/D, )
25: VAR_006772 (H60R, chain C/D, )
26: VAR_071613 (A63P, chain C/D, )
27: VAR_071614 (L64P, chain C/D, )
28: VAR_006773 (G69E, chain C/D, )
29: VAR_006774 (G70R, chain C/D, )
30: VAR_071615 (Y71C, chain C/D, )
31: VAR_006775 (F73L, chain C/D, )
32: VAR_071616 (L77Q, chain C/D, )
33: VAR_006776 (L77V, chain C/D, )
34: VAR_006777 (D79V, chain C/D, )
35: VAR_006778 (S103R, chain D, )
36: VAR_071618 (T123P, chain C/D, )
37: VAR_006780 (V129D, chain C/D, )
38: VAR_006781 (L130S, chain C/D, )
39: VAR_006782 (I131M, chain C/D, )
40: VAR_006783 (I131T, chain C/D, )
41: VAR_006784 (D134G, chain C/D, )
42: VAR_006785 (M142K, chain C/D, )
43: VAR_071619 (L146P, chain C/D, )
44: VAR_071620 (K158E, chain C/D, )
45: VAR_006787 (A160S, chain C/D, )
46: VAR_006788 (S161R, chain C/D, )
47: VAR_006789 (T167I, chain C/D, )
48: VAR_006790 (P175L, chain C/D, )
49: VAR_006791 (D176V, chain C/D, )
50: VAR_006792 (D176Y, chain C/D, )
51: VAR_006796 (I182T, chain C/D, )
52: VAR_071622 (D184G, chain C/D, )
53: VAR_006795 (V187A, chain C/D, )
54: VAR_071623 (A191V, chain C/D, )
55: VAR_006797 (D193E, chain C/D, )
56: VAR_006798 (D193N, chain C/D, )
57: VAR_006799 (Y194C, chain C/D, )
58: VAR_006800 (F198V, chain C/D, )
59: VAR_006801 (D200G, chain C/D, )
60: VAR_006802 (D200N, chain C/D, )
61: VAR_006803 (D200Y, chain C/D, )
62: VAR_006804 (H203D, chain C/D, )
63: VAR_006805 (H203R, chain C/D, )
64: VAR_006806 (C205Y, chain C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_006750
G
7
D
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
G
6
D
02
UniProt
VAR_006751
V
8
G
HPRT_HUMAN
Disease (LNS)
---
C/D
V
7
G
03
UniProt
VAR_006752
G
16
D
HPRT_HUMAN
Disease (LNS)
---
C/D
G
15
D
04
UniProt
VAR_006753
G
16
S
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
G
15
S
05
UniProt
VAR_006754
D
20
V
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
D
19
V
06
UniProt
VAR_071610
C
23
F
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
C
22
F
07
UniProt
VAR_006755
C
23
W
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
C
22
W
08
UniProt
VAR_006756
L
41
P
HPRT_HUMAN
Disease (LNS)
---
C/D
L
40
P
09
UniProt
VAR_006757
I
42
F
HPRT_HUMAN
Disease (LNS)
---
C/D
I
41
F
10
UniProt
VAR_006758
I
42
T
HPRT_HUMAN
Disease (LNS)
---
C/D
I
41
T
11
UniProt
VAR_071611
D
44
Y
HPRT_HUMAN
Disease (LNS)
---
C/D
D
43
Y
12
UniProt
VAR_006760
R
45
K
HPRT_HUMAN
Disease (LNS)
---
C/D
R
44
K
13
UniProt
VAR_006761
R
48
H
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
R
47
H
14
UniProt
VAR_006763
A
50
P
HPRT_HUMAN
Disease (LNS)
---
C/D
A
49
P
15
UniProt
VAR_006762
A
50
V
HPRT_HUMAN
Disease (LNS)
---
C/D
A
49
V
16
UniProt
VAR_006764
R
51
G
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
R
50
G
17
UniProt
VAR_006765
R
51
P
HPRT_HUMAN
Disease (LNS)
---
C/D
R
50
P
18
UniProt
VAR_006766
D
52
G
HPRT_HUMAN
Unclassified
---
C/D
D
51
G
19
UniProt
VAR_006767
V
53
A
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
V
52
A
20
UniProt
VAR_006768
V
53
M
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
V
52
M
21
UniProt
VAR_006769
M
54
L
HPRT_HUMAN
Disease (LNS)
---
C/D
M
53
L
22
UniProt
VAR_006770
M
57
T
HPRT_HUMAN
Disease (LNS)
---
C/D
M
56
T
23
UniProt
VAR_006771
G
58
R
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
G
57
R
24
UniProt
VAR_071612
H
60
R
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
H
59
R
25
UniProt
VAR_006772
H
61
R
HPRT_HUMAN
Unclassified
---
C/D
H
60
R
26
UniProt
VAR_071613
A
64
P
HPRT_HUMAN
Disease (LNS)
---
C/D
A
63
P
27
UniProt
VAR_071614
L
65
P
HPRT_HUMAN
Disease (LNS)
---
C/D
L
64
P
28
UniProt
VAR_006773
G
70
E
HPRT_HUMAN
Disease (LNS)
---
C/D
G
69
E
29
UniProt
VAR_006774
G
71
R
HPRT_HUMAN
Disease (LNS)
---
C/D
G
70
R
30
UniProt
VAR_071615
Y
72
C
HPRT_HUMAN
Disease (LNS)
---
C/D
Y
71
C
31
UniProt
VAR_006775
F
74
L
HPRT_HUMAN
Disease (LNS)
---
C/D
F
73
L
32
UniProt
VAR_071616
L
78
Q
HPRT_HUMAN
Disease (LNS)
---
C/D
L
77
Q
33
UniProt
VAR_006776
L
78
V
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
L
77
V
34
UniProt
VAR_006777
D
80
V
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
D
79
V
35
UniProt
VAR_006778
S
104
R
HPRT_HUMAN
Disease (GOUT-HPRT)
---
D
S
103
R
36
UniProt
VAR_071618
T
124
P
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
T
123
P
37
UniProt
VAR_006780
V
130
D
HPRT_HUMAN
Disease (LNS)
---
C/D
V
129
D
38
UniProt
VAR_006781
L
131
S
HPRT_HUMAN
Disease (LNS)
---
C/D
L
130
S
39
UniProt
VAR_006782
I
132
M
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
I
131
M
40
UniProt
VAR_006783
I
132
T
HPRT_HUMAN
Disease (LNS)
---
C/D
I
131
T
41
UniProt
VAR_006784
D
135
G
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
D
134
G
42
UniProt
VAR_006785
M
143
K
HPRT_HUMAN
Disease (LNS)
---
C/D
M
142
K
43
UniProt
VAR_071619
L
147
P
HPRT_HUMAN
Disease (LNS)
---
C/D
L
146
P
44
UniProt
VAR_071620
K
159
E
HPRT_HUMAN
Disease (LNS)
---
C/D
K
158
E
45
UniProt
VAR_006787
A
161
S
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
A
160
S
46
UniProt
VAR_006788
S
162
R
HPRT_HUMAN
Disease (LNS)
---
C/D
S
161
R
47
UniProt
VAR_006789
T
168
I
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
T
167
I
48
UniProt
VAR_006790
P
176
L
HPRT_HUMAN
Disease (LNS)
---
C/D
P
175
L
49
UniProt
VAR_006791
D
177
V
HPRT_HUMAN
Disease (LNS)
---
C/D
D
176
V
50
UniProt
VAR_006792
D
177
Y
HPRT_HUMAN
Disease (LNS)
---
C/D
D
176
Y
51
UniProt
VAR_006796
I
183
T
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
I
182
T
52
UniProt
VAR_071622
D
185
G
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
D
184
G
53
UniProt
VAR_006795
V
188
A
HPRT_HUMAN
Unclassified
---
C/D
V
187
A
54
UniProt
VAR_071623
A
192
V
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
A
191
V
55
UniProt
VAR_006797
D
194
E
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
D
193
E
56
UniProt
VAR_006798
D
194
N
HPRT_HUMAN
Disease (LNS)
---
C/D
D
193
N
57
UniProt
VAR_006799
Y
195
C
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
Y
194
C
58
UniProt
VAR_006800
F
199
V
HPRT_HUMAN
Disease (LNS)
---
C/D
F
198
V
59
UniProt
VAR_006801
D
201
G
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
D
200
G
60
UniProt
VAR_006802
D
201
N
HPRT_HUMAN
Disease (GOUT-HPRT)
---
C/D
D
200
N
61
UniProt
VAR_006803
D
201
Y
HPRT_HUMAN
Disease (LNS)
---
C/D
D
200
Y
62
UniProt
VAR_006804
H
204
D
HPRT_HUMAN
Disease (LNS)
---
C/D
H
203
D
63
UniProt
VAR_006805
H
204
R
HPRT_HUMAN
Disease (LNS)
---
C/D
H
203
R
64
UniProt
VAR_006806
C
206
Y
HPRT_HUMAN
Disease (LNS)
---
C/D
C
205
Y
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: PUR_PYR_PR_TRANSFER (C:129-141,D:129-141)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PUR_PYR_PR_TRANSFER
PS00103
Purine/pyrimidine phosphoribosyl transferases signature.
HPRT_HUMAN
130-142
4
-
-
C:129-141
D:129-141
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1z7ga_ (A:)
1b: SCOP_d1z7gb_ (B:)
1c: SCOP_d1z7gc_ (C:)
1d: SCOP_d1z7gd_ (D:)
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(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PRTase-like
(145)
Superfamily
:
PRTase-like
(145)
Family
:
Phosphoribosyltransferases (PRTases)
(100)
Protein domain
:
Hypoxanthine-guanine PRTase (HGPRTase)
(11)
Human (Homo sapiens) [TaxId: 9606]
(9)
1a
d1z7ga_
A:
1b
d1z7gb_
B:
1c
d1z7gc_
C:
1d
d1z7gd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1z7gA00 (A:4-217)
1b: CATH_1z7gB00 (B:4-217)
1c: CATH_1z7gD00 (D:4-217)
1d: CATH_1z7gC00 (C:4-217)
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(
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(
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(
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.2020, no name defined]
(117)
Human (Homo sapiens)
(19)
1a
1z7gA00
A:4-217
1b
1z7gB00
B:4-217
1c
1z7gD00
D:4-217
1d
1z7gC00
C:4-217
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close CATH info
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Pribosyltran_1z7gD01 (D:32-163)
1b: PFAM_Pribosyltran_1z7gD02 (D:32-163)
1c: PFAM_Pribosyltran_1z7gD03 (D:32-163)
1d: PFAM_Pribosyltran_1z7gD04 (D:32-163)
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Clans
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(
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Organisms
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)
(
)
Clan
:
PRTase-like
(59)
Family
:
Pribosyltran
(59)
Homo sapiens (Human)
(7)
1a
Pribosyltran-1z7gD01
D:32-163
1b
Pribosyltran-1z7gD02
D:32-163
1c
Pribosyltran-1z7gD03
D:32-163
1d
Pribosyltran-1z7gD04
D:32-163
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Asym.Unit (142 KB)
Header - Asym.Unit
Biol.Unit 1 (136 KB)
Header - Biol.Unit 1
Biol.Unit 2 (139 KB)
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