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1Z3L
Biol. Unit 2
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Asym.Unit (25 KB)
Biol.Unit 1 (22 KB)
Biol.Unit 2 (41 KB)
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(1)
Title
:
X-RAY CRYSTAL STRUCTURE OF A MUTANT RIBONUCLEASE S (F8ANB)
Authors
:
M. Das, B. Vasudeva Rao, S. Ghosh, R. Varadarajan
Date
:
14 Mar 05 (Deposition) - 29 Mar 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : E,S
Biol. Unit 1: E,S (1x)
Biol. Unit 2: E,S (2x)
Keywords
:
Rnase-S Mutant (F8Anb), S-Protein, S-Peptide, Cavity, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Das, B. V. Rao, S. Ghosh, R. Varadarajan
Attempts To Delineate The Relative Contributions Of Changes In Hydrophobicity And Packing To Changes In Stability Of Ribonuclease S Mutants.
Biochemistry V. 44 5923 2005
(for further references see the
PDB file header
)
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: ALPHA-AMINOBUTYRIC ACID (ABAa)
2a: NORLEUCINE (NLEa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
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No.
Name
Count
Type
Full Name
1
ABA
2
Mod. Amino Acid
ALPHA-AMINOBUTYRIC ACID
2
NLE
2
Mod. Amino Acid
NORLEUCINE
3
SO4
4
Ligand/Ion
SULFATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS E:119 , PHE E:120 , HOH E:263 , HIS S:12
BINDING SITE FOR RESIDUE SO4 E 125
2
AC2
SOFTWARE
SER E:50 , LEU E:51 , LYS E:61 , HOH E:206 , SER S:15
BINDING SITE FOR RESIDUE SO4 E 126
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: RNASE_PANCREATIC (E:40-46)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RNASE_PANCREATIC
PS00127
Pancreatic ribonuclease family signature.
RNAS1_BOVIN
66-72
2
E:40-46
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1z3l_1 (S:,E:)
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Protein Domains
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(
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
RNase A-like
(356)
Superfamily
:
RNase A-like
(356)
Family
:
Ribonuclease A-like
(347)
Protein domain
:
Ribonuclease A (also ribonuclease B, S)
(173)
Cow (Bos taurus) [TaxId: 9913]
(164)
1a
d1z3l.1
S:,E:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1z3lE00 (E:21-124)
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Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
P-30 Protein
(299)
Homologous Superfamily
:
P-30 Protein
(299)
[unclassified]
(21)
1a
1z3lE00
E:21-124
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_RnaseA_1z3lS01 (S:1-15)
1b: PFAM_RnaseA_1z3lS02 (S:1-15)
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Clan
:
no clan defined [family: RnaseA]
(125)
Family
:
RnaseA
(125)
Bos taurus (Bovine)
(107)
1a
RnaseA-1z3lS01
S:1-15
1b
RnaseA-1z3lS02
S:1-15
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Asym.Unit (25 KB)
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