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1YUI
Asym. Unit
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Asym.Unit (34 KB)
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(1)
Title
:
SOLUTION NMR STRUCTURE OF THE GAGA FACTOR/DNA COMPLEX, REGULARIZED MEAN STRUCTURE
Authors
:
G. M. Clore, J. G. Omichinski, A. M. Gronenborn
Date
:
31 Dec 96 (Deposition) - 31 Dec 97 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B,C
Keywords
:
Complex (Dna-Binding Protein/Dna), Chromatin Remodeling, Dna Binding Protein/Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. G. Omichinski, P. V. Pedone, G. Felsenfeld, A. M. Gronenborn, G. M. Clore
The Solution Structure Of A Specific Gaga Factor-Dna Complex Reveals A Modular Binding Mode.
Nat. Struct. Biol. V. 4 122 1997
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
ZN
1
Ligand/Ion
ZINC ION
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:36 , CYS A:39 , HIS A:52 , HIS A:57
BINDING SITE FOR RESIDUE ZN A 64
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
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1: ZINC_FINGER_C2H2_1 (A:36-57)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_FINGER_C2H2_1
PS00028
Zinc finger C2H2 type domain signature.
GAGA_DROME
345-366
1
A:36-57
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d1yuia_ (A:)
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Protein Domains
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(
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Class
:
Small proteins
(3458)
Fold
:
beta-beta-alpha zinc fingers
(183)
Superfamily
:
beta-beta-alpha zinc fingers
(183)
Family
:
Classic zinc finger, C2H2
(162)
Protein domain
:
GAGA factor
(2)
Fruit fly (Drosophila melanogaster) [TaxId: 7227]
(2)
1a
d1yuia_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1yuiA00 (A:10-63)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Double Stranded RNA Binding Domain
(204)
Homologous Superfamily
:
Classic Zinc Finger
(45)
[unclassified]
(29)
1a
1yuiA00
A:10-63
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Pfam Domains
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all PFAM domains
1a: PFAM_GAGA_1yuiA01 (A:10-63)
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Clan
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C2H2-zf
(71)
Family
:
GAGA
(2)
Drosophila melanogaster (Fruit fly)
(2)
1a
GAGA-1yuiA01
A:10-63
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