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1YHU
Asym. Unit
Info
Asym.Unit (543 KB)
Biol.Unit 1 (523 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RIFTIA PACHYPTILA C1 HEMOGLOBIN REVEALS NOVEL ASSEMBLY OF 24 SUBUNITS.
Authors
:
J. F. Flores, C. R. Fisher, S. L. Carney, B. N. Green, J. K. Freytag, S. W. S W. E. Royer
Date
:
10 Jan 05 (Deposition) - 08 Feb 05 (Release) - 06 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.15
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X (1x)
Keywords
:
Hemoglobin, Globin Fold, Oxygen Storage-Transport Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. F. Flores, C. R. Fisher, S. L. Carney, B. N. Green, J. K. Freytag, S. W. Schaeffer, W. E. Royer Jr
Sulfide Binding Is Mediated By Zinc Ions Discovered In The Crystal Structure Of A Hydrothermal Vent Tubeworm Hemoglobin.
Proc. Natl. Acad. Sci. Usa V. 102 2713 2005
[
close entry info
]
Hetero Components
(3, 60)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
1b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
1c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
1d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
1e: PROTOPORPHYRIN IX CONTAINING FE (HEMe)
1f: PROTOPORPHYRIN IX CONTAINING FE (HEMf)
1g: PROTOPORPHYRIN IX CONTAINING FE (HEMg)
1h: PROTOPORPHYRIN IX CONTAINING FE (HEMh)
1i: PROTOPORPHYRIN IX CONTAINING FE (HEMi)
1j: PROTOPORPHYRIN IX CONTAINING FE (HEMj)
1k: PROTOPORPHYRIN IX CONTAINING FE (HEMk)
1l: PROTOPORPHYRIN IX CONTAINING FE (HEMl)
1m: PROTOPORPHYRIN IX CONTAINING FE (HEMm)
1n: PROTOPORPHYRIN IX CONTAINING FE (HEMn)
1o: PROTOPORPHYRIN IX CONTAINING FE (HEMo)
1p: PROTOPORPHYRIN IX CONTAINING FE (HEMp)
1q: PROTOPORPHYRIN IX CONTAINING FE (HEMq)
1r: PROTOPORPHYRIN IX CONTAINING FE (HEMr)
1s: PROTOPORPHYRIN IX CONTAINING FE (HEMs)
1t: PROTOPORPHYRIN IX CONTAINING FE (HEMt)
1u: PROTOPORPHYRIN IX CONTAINING FE (HEMu)
1v: PROTOPORPHYRIN IX CONTAINING FE (HEMv)
1w: PROTOPORPHYRIN IX CONTAINING FE (HEMw)
1x: PROTOPORPHYRIN IX CONTAINING FE (HEMx)
2a: OXYGEN MOLECULE (OXYa)
2b: OXYGEN MOLECULE (OXYb)
2c: OXYGEN MOLECULE (OXYc)
2d: OXYGEN MOLECULE (OXYd)
2e: OXYGEN MOLECULE (OXYe)
2f: OXYGEN MOLECULE (OXYf)
2g: OXYGEN MOLECULE (OXYg)
2h: OXYGEN MOLECULE (OXYh)
2i: OXYGEN MOLECULE (OXYi)
2j: OXYGEN MOLECULE (OXYj)
2k: OXYGEN MOLECULE (OXYk)
2l: OXYGEN MOLECULE (OXYl)
2m: OXYGEN MOLECULE (OXYm)
2n: OXYGEN MOLECULE (OXYn)
2o: OXYGEN MOLECULE (OXYo)
2p: OXYGEN MOLECULE (OXYp)
2q: OXYGEN MOLECULE (OXYq)
2r: OXYGEN MOLECULE (OXYr)
2s: OXYGEN MOLECULE (OXYs)
2t: OXYGEN MOLECULE (OXYt)
2u: OXYGEN MOLECULE (OXYu)
2v: OXYGEN MOLECULE (OXYv)
2w: OXYGEN MOLECULE (OXYw)
2x: OXYGEN MOLECULE (OXYx)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
3i: ZINC ION (ZNi)
3j: ZINC ION (ZNj)
3k: ZINC ION (ZNk)
3l: ZINC ION (ZNl)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
HEM
24
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
2
OXY
24
Ligand/Ion
OXYGEN MOLECULE
3
ZN
12
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(60, 60)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS B:31 , HIS B:57 , GLU J:118
BINDING SITE FOR RESIDUE ZN B 190
02
AC2
SOFTWARE
HIS B:36 , HIS B:40 , HIS B:111
BINDING SITE FOR RESIDUE ZN B 191
03
AC3
SOFTWARE
GLU B:118 , HIS F:31 , HIS F:57
BINDING SITE FOR RESIDUE ZN F 190
04
AC4
SOFTWARE
HIS F:36 , HIS F:40 , HIS F:111
BINDING SITE FOR RESIDUE ZN F 191
05
AC5
SOFTWARE
GLU F:118 , HIS J:31 , HIS J:57
BINDING SITE FOR RESIDUE ZN J 190
06
AC6
SOFTWARE
HIS J:36 , HIS J:40 , HIS J:111
BINDING SITE FOR RESIDUE ZN J 191
07
AC7
SOFTWARE
HIS N:31 , HIS N:57 , GLU V:118
BINDING SITE FOR RESIDUE ZN N 190
08
AC8
SOFTWARE
HIS N:36 , HIS N:40 , HIS N:111
BINDING SITE FOR RESIDUE ZN N 191
09
AC9
SOFTWARE
GLU N:118 , HIS R:31 , HIS R:57
BINDING SITE FOR RESIDUE ZN R 190
10
BC1
SOFTWARE
HIS R:36 , HIS R:40 , HIS R:111
BINDING SITE FOR RESIDUE ZN R 191
11
BC2
SOFTWARE
GLU R:118 , HIS V:31 , HIS V:57
BINDING SITE FOR RESIDUE ZN V 190
12
BC3
SOFTWARE
HIS V:36 , HIS V:40 , HIS V:111
BINDING SITE FOR RESIDUE ZN V 191
13
BC4
SOFTWARE
PHE A:48 , SER A:50 , VAL A:51 , ARG A:67 , LEU A:72 , GLN A:95 , HIS A:96 , ARG A:99 , ILE A:101 , ASN A:105 , PHE A:106 , PHE A:109 , ILE A:141 , OXY A:161 , HIS C:94 , GLN C:98
BINDING SITE FOR RESIDUE HEM A 160
14
BC5
SOFTWARE
TRP A:34 , PHE A:48 , HIS A:64 , VAL A:68 , HEM A:160
BINDING SITE FOR RESIDUE OXY A 161
15
BC6
SOFTWARE
MET B:47 , PHE B:48 , ARG B:50 , HIS B:64 , LEU B:72 , GLN B:95 , HIS B:96 , ARG B:99 , VAL B:101 , HIS B:105 , VAL B:109 , THR B:139 , OXY B:161 , HIS D:93 , GLN D:97
BINDING SITE FOR RESIDUE HEM B 160
16
BC7
SOFTWARE
TRP B:34 , PHE B:48 , HIS B:64 , VAL B:68 , HEM B:160
BINDING SITE FOR RESIDUE OXY B 161
17
BC8
SOFTWARE
HIS A:91 , GLN A:95 , LEU C:50 , PHE C:51 , ARG C:53 , VAL C:54 , ARG C:70 , GLN C:98 , HIS C:99 , GLY C:109 , PHE C:110 , MET C:113 , OXY C:161
BINDING SITE FOR RESIDUE HEM C 160
18
BC9
SOFTWARE
PHE C:37 , PHE C:51 , HIS C:67 , VAL C:71 , HEM C:160
BINDING SITE FOR RESIDUE OXY C 161
19
CC1
SOFTWARE
HIS B:91 , GLN B:95 , LEU D:49 , PHE D:50 , ALA D:52 , VAL D:53 , ARG D:69 , VAL D:70 , LEU D:74 , GLN D:97 , HIS D:98 , ARG D:101 , GLY D:108 , PHE D:109 , ILE D:112 , MET D:143 , OXY D:161
BINDING SITE FOR RESIDUE HEM D 160
20
CC2
SOFTWARE
PHE D:36 , PHE D:50 , HIS D:66 , VAL D:70 , HEM D:160
BINDING SITE FOR RESIDUE OXY D 161
21
CC3
SOFTWARE
PHE E:48 , SER E:50 , VAL E:51 , ARG E:67 , GLN E:95 , HIS E:96 , ARG E:99 , ILE E:101 , ASN E:105 , PHE E:106 , PHE E:109 , ILE E:141 , OXY E:161 , HIS G:94 , GLN G:98
BINDING SITE FOR RESIDUE HEM E 160
22
CC4
SOFTWARE
TRP E:34 , PHE E:48 , HIS E:64 , HEM E:160
BINDING SITE FOR RESIDUE OXY E 161
23
CC5
SOFTWARE
MET F:47 , PHE F:48 , ARG F:50 , LEU F:72 , GLN F:95 , HIS F:96 , ARG F:99 , VAL F:101 , HIS F:105 , TYR F:106 , VAL F:109 , OXY F:161 , HIS H:93 , GLN H:97
BINDING SITE FOR RESIDUE HEM F 160
24
CC6
SOFTWARE
TRP F:34 , PHE F:48 , HIS F:64 , VAL F:68 , HEM F:160
BINDING SITE FOR RESIDUE OXY F 161
25
CC7
SOFTWARE
HIS E:91 , GLN E:95 , LEU G:50 , PHE G:51 , ARG G:53 , VAL G:54 , ARG G:70 , GLN G:98 , HIS G:99 , GLY G:109 , PHE G:110 , MET G:113 , OXY G:161
BINDING SITE FOR RESIDUE HEM G 160
26
CC8
SOFTWARE
PHE G:37 , PHE G:51 , HIS G:67 , VAL G:71 , HEM G:160
BINDING SITE FOR RESIDUE OXY G 161
27
CC9
SOFTWARE
HIS F:91 , GLN F:95 , LEU H:49 , PHE H:50 , ALA H:52 , VAL H:53 , ARG H:69 , LEU H:74 , GLN H:97 , HIS H:98 , ARG H:101 , GLY H:108 , PHE H:109 , ILE H:112 , MET H:143 , OXY H:161
BINDING SITE FOR RESIDUE HEM H 160
28
DC1
SOFTWARE
PHE H:36 , PHE H:50 , HIS H:66 , VAL H:70 , HEM H:160
BINDING SITE FOR RESIDUE OXY H 161
29
DC2
SOFTWARE
LYS H:54 , PHE I:48 , SER I:50 , VAL I:51 , ARG I:67 , GLN I:95 , HIS I:96 , ARG I:99 , ILE I:101 , ASN I:105 , PHE I:106 , PHE I:109 , ILE I:141 , OXY I:161 , HIS K:94 , GLN K:98
BINDING SITE FOR RESIDUE HEM I 160
30
DC3
SOFTWARE
TRP I:34 , PHE I:48 , HIS I:64 , HEM I:160
BINDING SITE FOR RESIDUE OXY I 161
31
DC4
SOFTWARE
MET J:47 , PHE J:48 , ARG J:50 , GLN J:95 , HIS J:96 , ARG J:99 , VAL J:101 , HIS J:105 , TYR J:106 , VAL J:109 , OXY J:161 , HIS L:93 , GLN L:97
BINDING SITE FOR RESIDUE HEM J 160
32
DC5
SOFTWARE
TRP J:34 , PHE J:48 , HIS J:64 , VAL J:68 , HEM J:160
BINDING SITE FOR RESIDUE OXY J 161
33
DC6
SOFTWARE
HIS I:91 , GLN I:95 , LEU K:50 , PHE K:51 , ARG K:53 , VAL K:54 , ARG K:70 , GLN K:98 , HIS K:99 , GLY K:109 , PHE K:110 , MET K:113 , OXY K:161
BINDING SITE FOR RESIDUE HEM K 160
34
DC7
SOFTWARE
PHE K:37 , PHE K:51 , HIS K:67 , VAL K:71 , HEM K:160
BINDING SITE FOR RESIDUE OXY K 161
35
DC8
SOFTWARE
HIS J:91 , GLN J:95 , LEU L:49 , PHE L:50 , ALA L:52 , VAL L:53 , ARG L:69 , LEU L:74 , GLN L:97 , HIS L:98 , ARG L:101 , GLY L:108 , PHE L:109 , ILE L:112 , MET L:143 , OXY L:161
BINDING SITE FOR RESIDUE HEM L 160
36
DC9
SOFTWARE
PHE L:36 , PHE L:50 , HIS L:66 , VAL L:70 , HEM L:160
BINDING SITE FOR RESIDUE OXY L 161
37
EC1
SOFTWARE
PHE M:48 , SER M:50 , VAL M:51 , ARG M:67 , LEU M:72 , GLN M:95 , HIS M:96 , ARG M:99 , ILE M:101 , ASN M:105 , PHE M:106 , PHE M:109 , ILE M:141 , OXY M:161 , HIS O:94 , GLN O:98
BINDING SITE FOR RESIDUE HEM M 160
38
EC2
SOFTWARE
TRP M:34 , PHE M:48 , HIS M:64 , HEM M:160
BINDING SITE FOR RESIDUE OXY M 161
39
EC3
SOFTWARE
MET N:47 , PHE N:48 , ARG N:50 , VAL N:51 , LEU N:72 , GLN N:95 , HIS N:96 , ARG N:99 , VAL N:101 , HIS N:105 , TYR N:106 , VAL N:109 , OXY N:161 , HIS P:93 , GLN P:97
BINDING SITE FOR RESIDUE HEM N 160
40
EC4
SOFTWARE
TRP N:34 , PHE N:48 , HIS N:64 , VAL N:68 , HEM N:160
BINDING SITE FOR RESIDUE OXY N 161
41
EC5
SOFTWARE
HIS M:91 , GLN M:95 , LEU O:50 , PHE O:51 , ARG O:53 , VAL O:54 , ARG O:70 , GLN O:98 , HIS O:99 , ARG O:102 , GLY O:109 , PHE O:110 , MET O:113 , OXY O:161
BINDING SITE FOR RESIDUE HEM O 160
42
EC6
SOFTWARE
PHE O:37 , PHE O:51 , HIS O:67 , VAL O:71 , HEM O:160
BINDING SITE FOR RESIDUE OXY O 161
43
EC7
SOFTWARE
HIS N:91 , GLN N:95 , LEU P:49 , PHE P:50 , ALA P:52 , VAL P:53 , ARG P:69 , LEU P:74 , GLN P:97 , HIS P:98 , ARG P:101 , GLY P:108 , PHE P:109 , ILE P:112 , MET P:143 , OXY P:161
BINDING SITE FOR RESIDUE HEM P 160
44
EC8
SOFTWARE
PHE P:36 , PHE P:50 , HIS P:66 , VAL P:70 , HEM P:160
BINDING SITE FOR RESIDUE OXY P 161
45
EC9
SOFTWARE
PHE Q:48 , SER Q:50 , VAL Q:51 , ARG Q:67 , GLN Q:95 , HIS Q:96 , ARG Q:99 , ILE Q:101 , ASN Q:105 , PHE Q:106 , PHE Q:109 , ILE Q:141 , OXY Q:161 , HIS S:94 , GLN S:98
BINDING SITE FOR RESIDUE HEM Q 160
46
FC1
SOFTWARE
TRP Q:34 , PHE Q:48 , HIS Q:64 , HEM Q:160
BINDING SITE FOR RESIDUE OXY Q 161
47
FC2
SOFTWARE
MET R:47 , PHE R:48 , ARG R:50 , VAL R:51 , HIS R:64 , GLN R:95 , HIS R:96 , ARG R:99 , VAL R:101 , HIS R:105 , TYR R:106 , VAL R:109 , OXY R:161 , HIS T:93 , GLN T:97
BINDING SITE FOR RESIDUE HEM R 160
48
FC3
SOFTWARE
TRP R:34 , PHE R:48 , HIS R:64 , VAL R:68 , HEM R:160
BINDING SITE FOR RESIDUE OXY R 161
49
FC4
SOFTWARE
HIS Q:91 , GLN Q:95 , LEU S:50 , PHE S:51 , ARG S:53 , VAL S:54 , ARG S:70 , GLN S:98 , HIS S:99 , GLY S:109 , PHE S:110 , MET S:113 , OXY S:161
BINDING SITE FOR RESIDUE HEM S 160
50
FC5
SOFTWARE
PHE S:37 , PHE S:51 , HIS S:67 , VAL S:71 , HEM S:160
BINDING SITE FOR RESIDUE OXY S 161
51
FC6
SOFTWARE
HIS R:91 , GLN R:95 , LEU T:49 , PHE T:50 , ALA T:52 , VAL T:53 , ARG T:69 , LEU T:74 , GLN T:97 , HIS T:98 , ARG T:101 , GLY T:108 , PHE T:109 , ILE T:112 , MET T:143 , OXY T:161
BINDING SITE FOR RESIDUE HEM T 160
52
FC7
SOFTWARE
PHE T:36 , PHE T:50 , HIS T:66 , VAL T:70 , HEM T:160
BINDING SITE FOR RESIDUE OXY T 161
53
FC8
SOFTWARE
PHE U:48 , SER U:50 , VAL U:51 , ARG U:67 , LEU U:72 , GLN U:95 , HIS U:96 , ARG U:99 , ILE U:101 , ASN U:105 , PHE U:106 , PHE U:109 , ILE U:141 , OXY U:161 , HIS W:94 , GLN W:98
BINDING SITE FOR RESIDUE HEM U 160
54
FC9
SOFTWARE
TRP U:34 , PHE U:48 , HIS U:64 , HEM U:160
BINDING SITE FOR RESIDUE OXY U 161
55
GC1
SOFTWARE
MET V:47 , PHE V:48 , ARG V:50 , LEU V:72 , GLN V:95 , HIS V:96 , ARG V:99 , VAL V:101 , HIS V:105 , TYR V:106 , VAL V:109 , THR V:139 , OXY V:161 , HIS X:93 , GLN X:97
BINDING SITE FOR RESIDUE HEM V 160
56
GC2
SOFTWARE
TRP V:34 , PHE V:48 , HIS V:64 , VAL V:68 , HEM V:160
BINDING SITE FOR RESIDUE OXY V 161
57
GC3
SOFTWARE
HIS U:91 , GLN U:95 , LEU W:50 , PHE W:51 , ARG W:53 , VAL W:54 , ARG W:70 , GLN W:98 , HIS W:99 , ARG W:102 , GLY W:109 , PHE W:110 , MET W:113 , OXY W:161
BINDING SITE FOR RESIDUE HEM W 160
58
GC4
SOFTWARE
PHE W:37 , PHE W:51 , HIS W:67 , VAL W:71 , HEM W:160
BINDING SITE FOR RESIDUE OXY W 161
59
GC5
SOFTWARE
HIS V:91 , GLN V:95 , LEU X:49 , PHE X:50 , ALA X:52 , VAL X:53 , ARG X:69 , VAL X:70 , LEU X:74 , GLN X:97 , HIS X:98 , ARG X:101 , GLY X:108 , PHE X:109 , ILE X:112 , MET X:143 , OXY X:161
BINDING SITE FOR RESIDUE HEM X 160
60
GC6
SOFTWARE
PHE X:36 , PHE X:50 , HIS X:66 , VAL X:70 , HEM X:160
BINDING SITE FOR RESIDUE OXY X 161
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: GLOBIN (B:6-138,F:6-138,J:6-138,N:6-138,R:...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLOBIN
PS01033
Globin family profile.
GLBB_RIFPA
6-138
6
B:6-138
F:6-138
J:6-138
N:6-138
R:6-138
V:6-138
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 18)
Info
All SCOP Domains
1a: SCOP_d1yhua_ (A:)
1b: SCOP_d1yhub_ (B:)
1c: SCOP_d1yhun_ (N:)
1d: SCOP_d1yhup_ (P:)
1e: SCOP_d1yhuq_ (Q:)
1f: SCOP_d1yhur_ (R:)
1g: SCOP_d1yhut_ (T:)
1h: SCOP_d1yhuu_ (U:)
1i: SCOP_d1yhuv_ (V:)
1j: SCOP_d1yhux_ (X:)
1k: SCOP_d1yhud_ (D:)
1l: SCOP_d1yhue_ (E:)
1m: SCOP_d1yhuf_ (F:)
1n: SCOP_d1yhuh_ (H:)
1o: SCOP_d1yhui_ (I:)
1p: SCOP_d1yhuj_ (J:)
1q: SCOP_d1yhul_ (L:)
1r: SCOP_d1yhum_ (M:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Globin-like
(1351)
Superfamily
:
Globin-like
(1308)
Family
:
automated matches
(42)
Protein domain
:
automated matches
(42)
Riftia pachyptila [TaxId: 6426]
(1)
1a
d1yhua_
A:
1b
d1yhub_
B:
1c
d1yhun_
N:
1d
d1yhup_
P:
1e
d1yhuq_
Q:
1f
d1yhur_
R:
1g
d1yhut_
T:
1h
d1yhuu_
U:
1i
d1yhuv_
V:
1j
d1yhux_
X:
1k
d1yhud_
D:
1l
d1yhue_
E:
1m
d1yhuf_
F:
1n
d1yhuh_
H:
1o
d1yhui_
I:
1p
d1yhuj_
J:
1q
d1yhul_
L:
1r
d1yhum_
M:
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CATH Domains
(0, 0)
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Pfam Domains
(1, 24)
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1a: PFAM_Globin_1yhuV01 (V:8-114)
1b: PFAM_Globin_1yhuV02 (V:8-114)
1c: PFAM_Globin_1yhuV03 (V:8-114)
1d: PFAM_Globin_1yhuV04 (V:8-114)
1e: PFAM_Globin_1yhuV05 (V:8-114)
1f: PFAM_Globin_1yhuV06 (V:8-114)
1g: PFAM_Globin_1yhuX01 (X:16-128)
1h: PFAM_Globin_1yhuX02 (X:16-128)
1i: PFAM_Globin_1yhuX03 (X:16-128)
1j: PFAM_Globin_1yhuX04 (X:16-128)
1k: PFAM_Globin_1yhuX05 (X:16-128)
1l: PFAM_Globin_1yhuX06 (X:16-128)
1m: PFAM_Globin_1yhuW01 (W:36-118)
1n: PFAM_Globin_1yhuW02 (W:36-118)
1o: PFAM_Globin_1yhuW03 (W:36-118)
1p: PFAM_Globin_1yhuW04 (W:36-118)
1q: PFAM_Globin_1yhuW05 (W:36-118)
1r: PFAM_Globin_1yhuW06 (W:36-118)
1s: PFAM_Globin_1yhuU01 (U:16-114)
1t: PFAM_Globin_1yhuU02 (U:16-114)
1u: PFAM_Globin_1yhuU03 (U:16-114)
1v: PFAM_Globin_1yhuU04 (U:16-114)
1w: PFAM_Globin_1yhuU05 (U:16-114)
1x: PFAM_Globin_1yhuU06 (U:16-114)
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Clan
:
Globin
(291)
Family
:
Globin
(264)
Riftia pachyptila (Vent tube worm)
(1)
1a
Globin-1yhuV01
V:8-114
1b
Globin-1yhuV02
V:8-114
1c
Globin-1yhuV03
V:8-114
1d
Globin-1yhuV04
V:8-114
1e
Globin-1yhuV05
V:8-114
1f
Globin-1yhuV06
V:8-114
1g
Globin-1yhuX01
X:16-128
1h
Globin-1yhuX02
X:16-128
1i
Globin-1yhuX03
X:16-128
1j
Globin-1yhuX04
X:16-128
1k
Globin-1yhuX05
X:16-128
1l
Globin-1yhuX06
X:16-128
1m
Globin-1yhuW01
W:36-118
1n
Globin-1yhuW02
W:36-118
1o
Globin-1yhuW03
W:36-118
1p
Globin-1yhuW04
W:36-118
1q
Globin-1yhuW05
W:36-118
1r
Globin-1yhuW06
W:36-118
1s
Globin-1yhuU01
U:16-114
1t
Globin-1yhuU02
U:16-114
1u
Globin-1yhuU03
U:16-114
1v
Globin-1yhuU04
U:16-114
1w
Globin-1yhuU05
U:16-114
1x
Globin-1yhuU06
U:16-114
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