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1Y2A
Asym. Unit
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Asym.Unit (64 KB)
Biol.Unit 1 (60 KB)
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(1)
Title
:
STRUCTURE OF MAMMALIAN IMPORTIN BOUND TO THE NON-CLASSICAL PLSCR1-NLS
Authors
:
M. -H. Chen, I. Ben-Efraim, G. Mitrousis, N. Walker-Kopp, P. J. Sims, G. Cingolani
Date
:
22 Nov 04 (Deposition) - 01 Feb 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : C,P
Biol. Unit 1: C,P (1x)
Keywords
:
Armadillo Repeat; Protein:Peptide Complex; Superhelix Of Helices, Protein Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. -H. Chen, I. Ben-Efraim, G. Mitrousis, N. Walker-Kopp, P. J. Sims, G. Cingolani
Phospholipid Scramblase 1 Contains A Nonclassical Nuclear Localization Signal With Unique Binding Site In Importin Alpha
J. Biol. Chem. V. 280 10599 2005
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_034388 (H6Y, chain P, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_034388
H
262
Y
PLS1_HUMAN
Polymorphism
343320
P
H
6
Y
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: ARM_REPEAT (C:162-204|C:119-162|C:204-230|C:25...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ARM_REPEAT
PS50176
Armadillo/plakoglobin ARM repeat profile.
IMA1_MOUSE
162-204
119-162
204-230
251-293
293-335
335-377
6
C:162-204
C:119-162
C:204-230
C:251-293
C:293-335
C:335-377
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Exons
(1, 1)
Info
All Exons
Exon 1.10f (P:1-10)
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All Exon Boundaries
1: Boundary 1.8f/1.10f
2: Boundary 1.10f/1.12i
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000342435
1a
ENSE00001851057
chr3:
146262651-146262254
398
PLS1_HUMAN
-
0
0
-
-
1.4b
ENST00000342435
4b
ENSE00002197926
chr3:
146254352-146254327
26
PLS1_HUMAN
1-5
5
0
-
-
1.5a
ENST00000342435
5a
ENSE00001805073
chr3:
146251337-146251257
81
PLS1_HUMAN
5-32
28
0
-
-
1.6a
ENST00000342435
6a
ENSE00001364114
chr3:
146246618-146246401
218
PLS1_HUMAN
32-104
73
0
-
-
1.7a
ENST00000342435
7a
ENSE00001721898
chr3:
146243434-146243392
43
PLS1_HUMAN
105-119
15
0
-
-
1.8a
ENST00000342435
8a
ENSE00001662426
chr3:
146239840-146239620
221
PLS1_HUMAN
119-192
74
0
-
-
1.8f
ENST00000342435
8f
ENSE00001730256
chr3:
146239492-146239331
162
PLS1_HUMAN
193-246
54
0
-
-
1.10f
ENST00000342435
10f
ENSE00001733149
chr3:
146234954-146234793
162
PLS1_HUMAN
247-300
54
1
P:1-10
10
1.12i
ENST00000342435
12i
ENSE00001884022
chr3:
146233888-146232967
922
PLS1_HUMAN
301-318
18
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1y2ac_ (C:)
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Protein Domains
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(
)
Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
ARM repeat
(317)
Family
:
Armadillo repeat
(77)
Protein domain
:
Importin alpha
(17)
Mouse (Mus musculus) [TaxId: 10090]
(17)
1a
d1y2ac_
C:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1y2aC00 (C:75-497)
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Organisms
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Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Leucine-rich Repeat Variant
(77)
Homologous Superfamily
:
Leucine-rich Repeat Variant
(75)
House mouse (Mus musculus)
(10)
1a
1y2aC00
C:75-497
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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