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1Y10
Biol. Unit 3
Info
Asym.Unit (239 KB)
Biol.Unit 1 (116 KB)
Biol.Unit 2 (116 KB)
Biol.Unit 3 (227 KB)
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(1)
Title
:
MYCOBACTERIAL ADENYLYL CYCLASE RV1264, HOLOENZYME, INHIBITED STATE
Authors
:
I. Tews, F. Findeisen, I. Sinning, A. Schultz, J. E. Schultz, J. U. Linde
Date
:
16 Nov 04 (Deposition) - 24 May 05 (Release) - 23 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Adenylyl Cyclase Fold, Lyase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
I. Tews, F. Findeisen, I. Sinning, A. Schultz, J. E. Schultz, J. U. Linder
The Structure Of A Ph-Sensing Mycobacterial Adenylyl Cyclas Holoenzyme
Science V. 308 1020 2005
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
1c: PENTAETHYLENE GLYCOL (1PEc)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
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Label:
No.
Name
Count
Type
Full Name
1
1PE
3
Ligand/Ion
PENTAETHYLENE GLYCOL
2
CA
-1
Ligand/Ion
CALCIUM ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP C:265 , HOH C:690 , GLU D:136
BINDING SITE FOR RESIDUE CA C 604
02
AC2
SOFTWARE
ASP D:222 , LEU D:223 , ASP D:265
BINDING SITE FOR RESIDUE CA D 605
03
AC3
SOFTWARE
HOH A:673 , ASP B:222 , LEU B:223 , ASP B:265
BINDING SITE FOR RESIDUE CA B 606
04
AC4
SOFTWARE
ASP A:222 , LEU A:223 , ASP A:265 , ARG A:298 , HOH A:669
BINDING SITE FOR RESIDUE CA A 607
05
AC5
SOFTWARE
GLU A:136 , HOH A:673 , ASP B:222 , ASP B:265 , HOH B:661
BINDING SITE FOR RESIDUE CA A 608
06
AC6
SOFTWARE
GLU A:44 , HOH A:624 , HOH A:653 , GLU D:44
BINDING SITE FOR RESIDUE CA A 609
07
AC7
SOFTWARE
HOH C:708 , GLU D:195
BINDING SITE FOR RESIDUE CA D 610
08
AC8
SOFTWARE
ASN D:319
BINDING SITE FOR RESIDUE CA D 611
09
AC9
SOFTWARE
LEU A:53 , MET A:154 , PHE B:117 , VAL B:130
BINDING SITE FOR RESIDUE 1PE A 601
10
BC1
SOFTWARE
MET A:193 , MET B:145 , SER B:167 , HOH B:706
BINDING SITE FOR RESIDUE 1PE B 602
11
BC2
SOFTWARE
PHE C:117 , VAL C:130 , MET C:193 , ALA D:149 , LEU D:150 , HOH D:730
BINDING SITE FOR RESIDUE 1PE D 603
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 8)
Info
All PROSITE Patterns/Profiles
1: GUANYLATE_CYCLASE_2 (A:217-325,B:217-325,C:217-325,D:21...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GUANYLATE_CYCLASE_2
PS50125
Guanylate cyclase domain profile.
Y1264_MYCTO
217-325
4
A:217-325
B:217-325
C:217-325
D:217-325
Y1264_MYCTU
217-325
4
A:217-325
B:217-325
C:217-325
D:217-325
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Guanylate_cyc_1y10D01 (D:209-376)
1b: PFAM_Guanylate_cyc_1y10D02 (D:209-376)
1c: PFAM_Guanylate_cyc_1y10D03 (D:209-376)
1d: PFAM_Guanylate_cyc_1y10D04 (D:209-376)
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Clans
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Families
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)
Organisms
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)
(
)
Clan
:
Nucleot_cyclase
(14)
Family
:
Guanylate_cyc
(8)
Mycobacterium tuberculosis
(4)
1a
Guanylate_cyc-1y10D01
D:209-376
1b
Guanylate_cyc-1y10D02
D:209-376
1c
Guanylate_cyc-1y10D03
D:209-376
1d
Guanylate_cyc-1y10D04
D:209-376
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Show PDB file:
Asym.Unit (239 KB)
Header - Asym.Unit
Biol.Unit 1 (116 KB)
Header - Biol.Unit 1
Biol.Unit 2 (116 KB)
Header - Biol.Unit 2
Biol.Unit 3 (227 KB)
Header - Biol.Unit 3
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