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1XZO
Biol. Unit 1
Info
Asym.Unit (74 KB)
Biol.Unit 1 (34 KB)
Biol.Unit 2 (34 KB)
Biol.Unit 3 (127 KB)
Biol.Unit 4 (65 KB)
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(1)
Title
:
IDENTIFICATION OF A DISULFIDE SWITCH IN BSSCO, A MEMBER OF THE SCO FAMILY OF CYTOCHROME C OXIDASE ASSEMBLY PROTEINS
Authors
:
Q. Ye, I. Imriskova-Sosova, B. C. Hill, Z. Jia, Montreal-Kingston Bac Structural Genomics Initiative (Bsgi)
Date
:
12 Nov 04 (Deposition) - 01 Mar 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (2x)
Biol. Unit 4: A,B (1x)
Keywords
:
Thioredoxin-Like Fold, Structural Genomics, Montreal-Kingston Bacterial Structural Genomics Initiative, Bsgi, Metal Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Q. Ye, I. Imriskova-Sosova, B. C. Hill, Z. Jia
Identification Of A Disulfide Switch In Bssco, A Member Of The Sco Family Of Cytochrome C Oxidase Assembly Proteins
Biochemistry V. 44 2934 2005
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
1k: CALCIUM ION (CAk)
1l: CALCIUM ION (CAl)
1m: CALCIUM ION (CAm)
1n: CALCIUM ION (CAn)
2a: CADMIUM ION (CDa)
2b: CADMIUM ION (CDb)
2c: CADMIUM ION (CDc)
2d: CADMIUM ION (CDd)
2e: CADMIUM ION (CDe)
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC9 (SOFTWARE)
09: BC1 (SOFTWARE)
10: BC2 (SOFTWARE)
11: BC3 (SOFTWARE)
12: BC4 (SOFTWARE)
13: BC5 (SOFTWARE)
14: BC6 (SOFTWARE)
15: BC7 (SOFTWARE)
16: BC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:161 , HIS B:55 , CA B:1011 , HOH B:1036 , HOH B:1203
BINDING SITE FOR RESIDUE CD B 1000
02
AC2
SOFTWARE
HIS A:55 , CA A:1015 , HOH A:1035 , HOH A:1186 , ASP B:161
BINDING SITE FOR RESIDUE CD A 1001
03
AC3
SOFTWARE
GLU A:14 , GLU B:114 , HOH B:1208 , HOH B:1215
BINDING SITE FOR RESIDUE CD A 1002
04
AC4
SOFTWARE
GLU A:113 , LYS A:125 , HOH A:1029
BINDING SITE FOR RESIDUE CD A 1003
05
AC5
SOFTWARE
LYS A:6 , ASP A:162 , ASP A:166 , HOH A:1183
BINDING SITE FOR RESIDUE CD A 1004
06
AC6
SOFTWARE
THR A:17 , CA A:1010 , HOH A:1044 , HOH A:1073 , HOH A:1162 , THR B:17 , HOH B:1020 , HOH B:1039
BINDING SITE FOR RESIDUE CA A 1005
07
AC7
SOFTWARE
HOH A:1033 , HOH A:1138 , GLU B:29 , HOH B:1153 , HOH B:1214
BINDING SITE FOR RESIDUE CA B 1006
08
AC9
SOFTWARE
GLU A:29 , HOH A:1187 , HOH B:1025
BINDING SITE FOR RESIDUE CA A 1008
09
BC1
SOFTWARE
ASP A:58 , HOH A:1058 , HOH A:1079 , HOH B:1219
BINDING SITE FOR RESIDUE CA A 1009
10
BC2
SOFTWARE
THR A:17 , GLY A:106 , CA A:1005 , HOH A:1073 , HOH A:1162 , THR B:17
BINDING SITE FOR RESIDUE CA A 1010
11
BC3
SOFTWARE
LYS A:62 , ASP A:161 , HOH A:1080 , HIS B:55 , TYR B:160 , CD B:1000
BINDING SITE FOR RESIDUE CA B 1011
12
BC4
SOFTWARE
SER A:108 , PHE B:16 , LEU B:28 , GLU B:29 , HOH B:1102
BINDING SITE FOR RESIDUE CA B 1012
13
BC5
SOFTWARE
ASP A:69 , HOH A:1124 , HOH A:1184
BINDING SITE FOR RESIDUE CA A 1013
14
BC6
SOFTWARE
ASP A:78 , HOH A:1048 , HOH A:1109
BINDING SITE FOR RESIDUE CA A 1014
15
BC7
SOFTWARE
HIS A:55 , TYR A:160 , CD A:1001 , HOH A:1064 , LYS B:62 , ASP B:161
BINDING SITE FOR RESIDUE CA A 1015
16
BC8
SOFTWARE
PRO A:15 , PHE A:16 , GLU A:29 , HOH A:1123 , SER B:108 , HOH B:1022
BINDING SITE FOR RESIDUE CA A 1016
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: THIOREDOXIN_2 (A:7-172)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
THIOREDOXIN_2
PS51352
Thioredoxin domain profile.
SCO1_BACSU
26-191
1
A:7-172
-
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1xzoa1 (A:3-174)
1b: SCOP_d1xzob_ (B:)
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Classes
(
)
(
)
Folds
(
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(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione peroxidase-like
(136)
Protein domain
:
Thioredoxin-like protein Sco1 (YpmQ), soluble domain
(6)
Bacillus subtilis [TaxId: 1423]
(2)
1a
d1xzoa1
A:3-174
1b
d1xzob_
B:
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_SCO1_SenC_1xzoB01 (B:3-155)
1b: PFAM_SCO1_SenC_1xzoB02 (B:3-155)
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Clans
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(
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Families
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(
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Organisms
(
)
(
)
Clan
:
Thioredoxin
(367)
Family
:
SCO1-SenC
(7)
Bacillus subtilis
(2)
1a
SCO1-SenC-1xzoB01
B:3-155
1b
SCO1-SenC-1xzoB02
B:3-155
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (74 KB)
Header - Asym.Unit
Biol.Unit 1 (34 KB)
Header - Biol.Unit 1
Biol.Unit 2 (34 KB)
Header - Biol.Unit 2
Biol.Unit 3 (127 KB)
Header - Biol.Unit 3
Biol.Unit 4 (65 KB)
Header - Biol.Unit 4
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