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1XUT
Asym. Unit
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Asym.Unit (244 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF TACI-CRD2
Authors
:
S. G. Hymowitz, D. R. Patel, H. J. Wallweber, S. Runyon, M. Yan, J. Yin, S. K. Shriver, N. C. Gordon, B. Pan, N. J. Skelton, R. F. Kelley, M. A. Starovasnik
Date
:
26 Oct 04 (Deposition) - 09 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Tnf Receptor, Cytokine, Cysteine-Rich Domain, Receptor, Cytokine Receptor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. G. Hymowitz, D. R. Patel, H. J. Wallweber, S. Runyon, M. Yan, J. Yin, S. K. Shriver, N. C. Gordon, B. Pan, N. J. Skelton, R. F. Kelley, M. A. Starovasnik
Structures Of April-Receptor Complexes: Like Bcma, Taci Employs Only A Single Cysteine-Rich Domain For High Affinity Ligand Binding.
J. Biol. Chem. V. 280 7218 2005
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_024027 (C104R, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_024027
C
104
R
TR13B_HUMAN
Disease (IGAD2)
34557412
A
C
104
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: TNFR_NGFR_1 (A:66-71)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TNFR_NGFR_1
PS00652
TNFR/NGFR family cysteine-rich region signature.
TR13B_HUMAN
34-71
1
A:66-71
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Exons
(2, 2)
Info
All Exons
Exon 1.2 (A:64-67 (gaps))
Exon 1.3 (A:68-109)
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1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000261652
1
ENSE00001378434
chr17:
16875402-16875329
74
TR13B_HUMAN
1-21
21
0
-
-
1.2
ENST00000261652
2
ENSE00001309090
chr17:
16855897-16855760
138
TR13B_HUMAN
21-67
47
1
A:64-67 (gaps)
8
1.3
ENST00000261652
3
ENSE00001151854
chr17:
16852297-16852052
246
TR13B_HUMAN
67-149
83
1
A:68-109
42
1.4
ENST00000261652
4
ENSE00000691547
chr17:
16843825-16843640
186
TR13B_HUMAN
149-211
63
0
-
-
1.5b
ENST00000261652
5b
ENSE00001323387
chr17:
16843111-16842399
713
TR13B_HUMAN
211-293
83
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1xuta_ (A:)
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)
Protein Domains
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(
)
Organisms
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)
(
)
Class
:
Small proteins
(3458)
Fold
:
TNF receptor-like
(25)
Superfamily
:
TNF receptor-like
(25)
Family
:
BAFF receptor-like
(7)
Protein domain
:
Tumor necrosis factor receptor superfamily member 13B, TACI
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1xuta_
A:
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_TACI_CRD2_1xutA01 (A:69-109)
1b: PFAM_TACI_CRD2_1xutA02 (A:69-109)
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Clan
:
no clan defined [family: TACI-CRD2]
(2)
Family
:
TACI-CRD2
(2)
Homo sapiens (Human)
(2)
1a
TACI-CRD2-1xutA01
A:69-109
1b
TACI-CRD2-1xutA02
A:69-109
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Chain A
Asymmetric Unit 1
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Asym.Unit (244 KB)
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