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1XTT
Asym. Unit
Info
Asym.Unit (154 KB)
Biol.Unit 1 (150 KB)
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(1)
Title
:
SULFOLOBUS SOLFATARICUS URACIL PHOSPHORIBOSYLTRANSFERASE IN COMPLEX WITH URIDINE 5'-MONOPHOSPHATE (UMP)
Authors
:
S. Arent, P. Harris, K. F. Jensen, S. Larsen
Date
:
24 Oct 04 (Deposition) - 08 Feb 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Tetramer, Type 1 Phosphoribosyltransferase, Ump Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
S. Arent, P. Harris, K. F. Jensen, S. Larsen
Allosteric Regulation And Communication Between Subunits In Uracil Phosphoribosyltransferase From Sulfolobus Solfataricus(, )
Biochemistry V. 44 883 2005
(for further references see the
PDB file header
)
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
2a: URIDINE-5'-MONOPHOSPHATE (U5Pa)
2b: URIDINE-5'-MONOPHOSPHATE (U5Pb)
2c: URIDINE-5'-MONOPHOSPHATE (U5Pc)
2d: URIDINE-5'-MONOPHOSPHATE (U5Pd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACY
2
Ligand/Ion
ACETIC ACID
2
U5P
4
Ligand/Ion
URIDINE-5'-MONOPHOSPHATE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:105 , ASP A:140 , MET A:142 , ALA A:144 , THR A:145 , ALA A:146 , SER A:147 , THR A:148 , GLY A:201 , TYR A:202 , ILE A:203 , GLY A:208 , ASP A:209 , ALA A:210 , HOH A:1251 , HOH A:1252 , HOH A:1265 , HOH A:1277 , HOH A:1289
BINDING SITE FOR RESIDUE U5P A 1250
2
AC2
SOFTWARE
ARG B:80 , ASP B:140 , MET B:142 , ALA B:144 , THR B:145 , ALA B:146 , SER B:147 , THR B:148 , GLY B:201 , TYR B:202 , ILE B:203 , GLY B:208 , ASP B:209 , ALA B:210 , HOH B:2254 , HOH B:2256 , HOH B:2263 , HOH B:2280 , HOH B:2306
BINDING SITE FOR RESIDUE U5P B 2250
3
AC3
SOFTWARE
ARG C:105 , ASP C:140 , MET C:142 , ALA C:144 , THR C:145 , ALA C:146 , SER C:147 , THR C:148 , GLY C:201 , TYR C:202 , ILE C:203 , GLY C:208 , ASP C:209 , ALA C:210 , HOH C:3251 , HOH C:3253 , HOH C:3257 , HOH C:3262
BINDING SITE FOR RESIDUE U5P C 3250
4
AC4
SOFTWARE
ARG D:80 , ARG D:105 , ASP D:140 , MET D:142 , ALA D:144 , THR D:145 , ALA D:146 , SER D:147 , THR D:148 , GLY D:201 , TYR D:202 , ILE D:203 , GLY D:208 , ASP D:209 , ALA D:210 , HOH D:4254 , HOH D:4266 , HOH D:4269 , HOH D:4276 , HOH D:4318
BINDING SITE FOR RESIDUE U5P D 4250
5
AC5
SOFTWARE
ASN B:77 , ILE B:78 , LEU B:79 , ARG B:80 , ALA B:81 , ALA B:82 , VAL B:83 , PHE B:215 , TYR C:123
BINDING SITE FOR RESIDUE ACY B 2252
6
AC6
SOFTWARE
TYR A:123 , ASN D:77 , ILE D:78 , LEU D:79 , ARG D:80 , ALA D:81 , ALA D:82 , VAL D:83 , PHE D:215
BINDING SITE FOR RESIDUE ACY D 4252
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1xtta1 (A:2-216)
1b: SCOP_d1xttb_ (B:)
1c: SCOP_d1xttc_ (C:)
1d: SCOP_d1xttd_ (D:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PRTase-like
(145)
Superfamily
:
PRTase-like
(145)
Family
:
Phosphoribosyltransferases (PRTases)
(100)
Protein domain
:
Uracil PRTase, Upp
(14)
Sulfolobus solfataricus [TaxId: 2287]
(5)
1a
d1xtta1
A:2-216
1b
d1xttb_
B:
1c
d1xttc_
C:
1d
d1xttd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1xttB00 (B:2-216)
1b: CATH_1xttD00 (D:2-216)
1c: CATH_1xttA00 (A:2-216)
1d: CATH_1xttC00 (C:2-216)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.2020, no name defined]
(117)
Sulfolobus solfataricus. Organism_taxid: 2287.
(5)
1a
1xttB00
B:2-216
1b
1xttD00
D:2-216
1c
1xttA00
A:2-216
1d
1xttC00
C:2-216
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Pribosyltran_1xttD01 (D:61-170)
1b: PFAM_Pribosyltran_1xttD02 (D:61-170)
1c: PFAM_Pribosyltran_1xttD03 (D:61-170)
1d: PFAM_Pribosyltran_1xttD04 (D:61-170)
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Clan
:
PRTase-like
(59)
Family
:
Pribosyltran
(59)
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
(3)
1a
Pribosyltran-1xttD01
D:61-170
1b
Pribosyltran-1xttD02
D:61-170
1c
Pribosyltran-1xttD03
D:61-170
1d
Pribosyltran-1xttD04
D:61-170
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Asymmetric Unit 1
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