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1XO1
Biol. Unit 2
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Asym.Unit (91 KB)
Biol.Unit 1 (45 KB)
Biol.Unit 2 (45 KB)
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(1)
Title
:
T5 5'-EXONUCLEASE MUTANT K83A
Authors
:
T. A. Ceska, D. Suck, J. R. Sayers
Date
:
19 Nov 98 (Deposition) - 02 Apr 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase, Exonuclease, Nuclease
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
S. J. Garforth, T. A. Ceska, D. Suck, J. R. Sayers
Mutagenesis Of Conserved Lysine Residues In Bacteriophage T5 5'-3' Exonuclease Suggests Separate Mechanisms Of Endo-And Exonucleolytic Cleavage.
Proc. Natl. Acad. Sci. Usa V. 96 38 1999
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1xo1a1 (A:186-290)
1b: SCOP_d1xo1b1 (B:186-290)
2a: SCOP_d1xo1a2 (A:19-185)
2b: SCOP_d1xo1b2 (B:19-185)
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Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
5' to 3' exonuclease, C-terminal subdomain
(21)
Family
:
5' to 3' exonuclease, C-terminal subdomain
(20)
Protein domain
:
T5 5'-exonuclease
(4)
Bacteriophage T5 [TaxId: 10726]
(4)
1a
d1xo1a1
A:186-290
1b
d1xo1b1
B:186-290
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PIN domain-like
(32)
Superfamily
:
PIN domain-like
(32)
Family
:
5' to 3' exonuclease catalytic domain
(20)
Protein domain
:
T5 5'-exonuclease
(4)
Bacteriophage T5 [TaxId: 10726]
(4)
2a
d1xo1a2
A:19-185
2b
d1xo1b2
B:19-185
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1xo1A02 (A:20-179,A:261-286)
1b: CATH_1xo1B02 (B:20-179,B:261-286)
2a: CATH_1xo1A01 (A:181-260)
2b: CATH_1xo1B01 (B:181-260)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
5'-nuclease
(19)
Enterobacteria phage t5. Organism_taxid: 10726. Strain: m72.
(1)
1a
1xo1A02
A:20-179,A:261-286
1b
1xo1B02
B:20-179,B:261-286
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
DNA polymerase; domain 1
(617)
Homologous Superfamily
:
5' to 3' exonuclease, C-terminal subdomain
(384)
Enterobacteria phage t5. Organism_taxid: 10726. Strain: m72.
(1)
2a
1xo1A01
A:181-260
2b
1xo1B01
B:181-260
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_5_3_exonuc_1xo1B01 (B:188-274)
1b: PFAM_5_3_exonuc_1xo1B02 (B:188-274)
2a: PFAM_5_3_exonuc_N_1xo1B03 (B:20-188)
2b: PFAM_5_3_exonuc_N_1xo1B04 (B:20-188)
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Clan
:
5_3_exonuc_C
(16)
Family
:
5_3_exonuc
(5)
Enterobacteria phage T5 (Bacteriophage T5)
(3)
1a
5_3_exonuc-1xo1B01
B:188-274
1b
5_3_exonuc-1xo1B02
B:188-274
Clan
:
PIN
(27)
Family
:
5_3_exonuc_N
(6)
Enterobacteria phage T5 (Bacteriophage T5)
(3)
2a
5_3_exonuc_N-1xo1B03
B:20-188
2b
5_3_exonuc_N-1xo1B04
B:20-188
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Show PDB file:
Asym.Unit (91 KB)
Header - Asym.Unit
Biol.Unit 1 (45 KB)
Header - Biol.Unit 1
Biol.Unit 2 (45 KB)
Header - Biol.Unit 2
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