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1XLP
Biol. Unit 3
Info
Asym.Unit (58 KB)
Biol.Unit 1 (19 KB)
Biol.Unit 2 (19 KB)
Biol.Unit 3 (19 KB)
Biol.Unit 4 (36 KB)
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(1)
Title
:
STRUCTURE OF OXIDIZED C73S PUTIDAREDOXIN FROM PSEUDOMONAS PUTIDA
Authors
:
I. F. Sevrioukova
Date
:
30 Sep 04 (Deposition) - 04 Oct 05 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: B,C (1x)
Keywords
:
[2Fe-2S], Ferredoxin, Oxidoreductase
(Keyword Search:
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Reference
:
I. F. Sevrioukova
Redox-Dependent Structural Reorganization In Putidaredoxin, A Vertebrate-Type [2Fe-2S] Ferredoxin From Pseudomonas Putida.
J. Mol. Biol. V. 347 607 2005
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: FE2/S2 (INORGANIC) CLUSTER (FESa)
1b: FE2/S2 (INORGANIC) CLUSTER (FESb)
1c: FE2/S2 (INORGANIC) CLUSTER (FESc)
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No.
Name
Count
Type
Full Name
1
FES
1
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
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Sites
(1, 1)
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All Sites
1: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
GLY C:37 , CYS C:39 , GLY C:41 , ALA C:43 , CYS C:45 , CYS C:48 , CYS C:86
BINDING SITE FOR RESIDUE FES C 107
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: 2FE2S_FER_2 (C:1-105)
2: ADX (C:39-49)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
2FE2S_FER_2
PS51085
2Fe-2S ferredoxin-type iron-sulfur binding domain profile.
PUTX_PSEPU
2-106
1
-
-
C:1-105
2
ADX
PS00814
Adrenodoxin family, iron-sulfur binding region signature.
PUTX_PSEPU
40-50
1
-
-
C:39-49
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1xlpa_ (A:)
1b: SCOP_d1xlpb_ (B:)
1c: SCOP_d1xlpc_ (C:)
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Protein Domains
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
2Fe-2S ferredoxin-like
(174)
Family
:
2Fe-2S ferredoxin-related
(74)
Protein domain
:
2Fe-2S ferredoxin
(54)
Pseudomonas putida, putidaredoxin [TaxId: 303]
(18)
1a
d1xlpa_
A:
1b
d1xlpb_
B:
1c
d1xlpc_
C:
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1xlpA00 (A:1-106)
1b: CATH_1xlpB00 (B:1-106)
1c: CATH_1xlpC00 (C:1-106)
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Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Ubiquitin-like (UB roll)
(674)
Homologous Superfamily
:
[code=3.10.20.30, no name defined]
(153)
Pseudomonas putida. Organism_taxid: 303.
(10)
1a
1xlpA00
A:1-106
1b
1xlpB00
B:1-106
1c
1xlpC00
C:1-106
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Fer2_1xlpC01 (C:6-91)
1b: PFAM_Fer2_1xlpC02 (C:6-91)
1c: PFAM_Fer2_1xlpC03 (C:6-91)
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Clan
:
Fer2
(69)
Family
:
Fer2
(60)
Pseudomonas putida (Arthrobacter siderocapsulatus)
(9)
1a
Fer2-1xlpC01
C:6-91
1b
Fer2-1xlpC02
C:6-91
1c
Fer2-1xlpC03
C:6-91
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Asym.Unit (58 KB)
Header - Asym.Unit
Biol.Unit 1 (19 KB)
Header - Biol.Unit 1
Biol.Unit 2 (19 KB)
Header - Biol.Unit 2
Biol.Unit 3 (19 KB)
Header - Biol.Unit 3
Biol.Unit 4 (36 KB)
Header - Biol.Unit 4
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