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1XLL
Biol. Unit 1
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Asym.Unit (140 KB)
Biol.Unit 1 (265 KB)
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(1)
Title
:
MECHANISM FOR ALDOSE-KETOSE INTERCONVERSION BY D-XYLOSE ISOMERASE INVOLVING RING OPENING FOLLOWED BY A 1,2-HYDRIDE SHIFT
Authors
:
C. A. Collyer, K. Henrick, D. M. Blow
Date
:
09 Oct 91 (Deposition) - 15 Jul 93 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Isomerase(Intramolecular Oxidoreductase)
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
C. A. Collyer, K. Henrick, D. M. Blow
Mechanism For Aldose-Ketose Interconversion By D-Xylose Isomerase Involving Ring Opening Followed By A 1, 2-Hydride Shift.
J. Mol. Biol. V. 212 211 1990
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
1d: ZINC ION (ZNd)
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Sites
(4, 4)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:216 , HIS A:219 , ASP A:254 , ASP A:256 , HOH A:503A , HOH A:633A
BINDING SITE FOR RESIDUE ZN A 398
2
AC2
SOFTWARE
GLU A:180 , GLU A:216 , ASP A:244 , ASP A:292
BINDING SITE FOR RESIDUE ZN A 399
3
AC3
SOFTWARE
GLU B:216 , HIS B:219 , ASP B:254 , ASP B:256 , HOH B:508B
BINDING SITE FOR RESIDUE ZN B 398
4
AC4
SOFTWARE
GLU B:180 , GLU B:216 , ASP B:244 , ASP B:292
BINDING SITE FOR RESIDUE ZN B 399
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 4)
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1: XYLOSE_ISOMERASE (A:3-390,B:3-390)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
XYLOSE_ISOMERASE
PS51415
Xylose isomerase family profile.
XYLA_ARTS7
4-391
4
A:3-390
B:3-390
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d1xlla_ (A:)
1b: SCOP_d1xllb_ (B:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Xylose isomerase-like
(125)
Family
:
Xylose isomerase
(97)
Protein domain
:
D-xylose isomerase
(82)
Arthrobacter, strain b3728 [TaxId: 1663]
(17)
1a
d1xlla_
A:
1b
d1xllb_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_1xllA00 (A:2-394)
1b: CATH_1xllB00 (B:2-394)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Divalent-metal-dependent TIM barrel enzymes
(98)
Nrrl b3728 (Arthrobacter sp)
(17)
1a
1xllA00
A:2-394
1b
1xllB00
B:2-394
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Pfam Domains
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Asym.Unit (140 KB)
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Header - Biol.Unit 1
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