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1XKH
Biol. Unit 2
Info
Asym.Unit (350 KB)
Biol.Unit 1 (118 KB)
Biol.Unit 2 (118 KB)
Biol.Unit 3 (118 KB)
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(1)
Title
:
PYOVERDINE OUTER MEMBRANE RECEPTOR FPVA FROM PSEUDOMONAS AERUGINOSA PAO1 BOUND TO PYOVERDINE
Authors
:
D. Cobessi, H. Celia, N. Folschweiller, I. J. Schalk, M. A. Abdallah, F.
Date
:
29 Sep 04 (Deposition) - 15 Mar 05 (Release) - 22 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.60
Chains
:
Asym. Unit : A,B,C,I,J,K
Biol. Unit 1: A,I (1x)
Biol. Unit 2: B,J (1x)
Biol. Unit 3: C,K (1x)
Keywords
:
Pyoverdine, Fpva, Tonb Box, Siderophore, Cell Membrane, Ion Transport, Tonb Dependent Receptor, Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Cobessi, H. Celia, N. Folschweiller, I. J. Schalk, M. A. Abdallah, F. Pattus
The Crystal Structure Of The Pyoverdine Outer Membrane Receptor Fpva From Pseudomonas Aeruginosa At 3. 6A Resolutio
J. Mol. Biol. V. 347 121 2005
(for further references see the
PDB file header
)
[
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Hetero Components
(5, 18)
Info
All Hetero Components
1a: D-SERINE (DSNa)
1b: D-SERINE (DSNb)
1c: D-SERINE (DSNc)
1d: D-SERINE (DSNd)
1e: D-SERINE (DSNe)
1f: D-SERINE (DSNf)
2a: N^5^-FORMYL-N^5^-HYDROXY-L-ORNITHI... (FHOa)
2b: N^5^-FORMYL-N^5^-HYDROXY-L-ORNITHI... (FHOb)
2c: N^5^-FORMYL-N^5^-HYDROXY-L-ORNITHI... (FHOc)
2d: N^5^-FORMYL-N^5^-HYDROXY-L-ORNITHI... (FHOd)
2e: N^5^-FORMYL-N^5^-HYDROXY-L-ORNITHI... (FHOe)
2f: N^5^-FORMYL-N^5^-HYDROXY-L-ORNITHI... (FHOf)
3a: SELENOMETHIONINE (MSEa)
3aa: SELENOMETHIONINE (MSEaa)
3ab: SELENOMETHIONINE (MSEab)
3ac: SELENOMETHIONINE (MSEac)
3ad: SELENOMETHIONINE (MSEad)
3ae: SELENOMETHIONINE (MSEae)
3af: SELENOMETHIONINE (MSEaf)
3ag: SELENOMETHIONINE (MSEag)
3ah: SELENOMETHIONINE (MSEah)
3ai: SELENOMETHIONINE (MSEai)
3aj: SELENOMETHIONINE (MSEaj)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
3r: SELENOMETHIONINE (MSEr)
3s: SELENOMETHIONINE (MSEs)
3t: SELENOMETHIONINE (MSEt)
3u: SELENOMETHIONINE (MSEu)
3v: SELENOMETHIONINE (MSEv)
3w: SELENOMETHIONINE (MSEw)
3x: SELENOMETHIONINE (MSEx)
3y: SELENOMETHIONINE (MSEy)
3z: SELENOMETHIONINE (MSEz)
4a: (1S)-1-CARBOXY-5-[(3-CARBOXYPROPAN... (PVEa)
4b: (1S)-1-CARBOXY-5-[(3-CARBOXYPROPAN... (PVEb)
4c: (1S)-1-CARBOXY-5-[(3-CARBOXYPROPAN... (PVEc)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DSN
2
Mod. Amino Acid
D-SERINE
2
FHO
2
Mod. Amino Acid
N^5^-FORMYL-N^5^-HYDROXY-L-ORNITHINE
3
MSE
12
Mod. Amino Acid
SELENOMETHIONINE
4
PVE
1
Ligand/Ion
(1S)-1-CARBOXY-5-[(3-CARBOXYPROPANOYL)AMINO]-8,9-DIHYDROXY-1,2,3,4-TETRAHYDROPYRIMIDO[1,2-A]QUINOLIN-11-IUM
5
SO4
1
Ligand/Ion
SULFATE ION
[
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Sites
(2, 2)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
HIS B:424 , LYS B:447 , LYS B:512 , TRP B:515
BINDING SITE FOR RESIDUE SO4 B 2002
2
AC5
SOFTWARE
TYR B:200 , ARG B:204 , TYR B:208 , ASN B:228 , GLY B:230 , TYR B:231 , TRP B:362 , VAL B:444 , GLN B:446 , TYR B:448 , ASP B:597 , TRP B:599 , TYR B:600 , TYR B:663 , TYR B:796
BINDING SITE FOR PYOVERDINE-CHROMOPHORE COMPLEX (CHAIN J RESIDUES 1 TO 9)
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: TONB_DEPENDENT_REC_2 (B:798-815)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TONB_DEPENDENT_REC_2
PS01156
TonB-dependent receptor proteins signature 2.
FPVA_PSEAE
798-815
1
-
B:798-815
-
[
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(2, 6)
Info
all CATH domains
1a: CATH_1xkhA02 (A:273-815)
1b: CATH_1xkhB02 (B:273-815)
1c: CATH_1xkhC02 (C:273-815)
2a: CATH_1xkhA01 (A:169-272)
2b: CATH_1xkhB01 (B:169-272)
2c: CATH_1xkhC01 (C:169-272)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Maltoporin; Chain A
(39)
Homologous Superfamily
:
[code=2.40.170.20, no name defined]
(28)
Pseudomonas aeruginosa. Organism_taxid: 287.
(2)
1a
1xkhA02
A:273-815
1b
1xkhB02
B:273-815
1c
1xkhC02
C:273-815
Architecture
:
Beta Complex
(381)
Topology
:
Ferric Hydroxamate Uptake Protein; Chain A, domain 1
(37)
Homologous Superfamily
:
Ferric Hydroxamate Uptake Protein; Chain A, domain 1
(36)
Pseudomonas aeruginosa. Organism_taxid: 287.
(3)
2a
1xkhA01
A:169-272
2b
1xkhB01
B:169-272
2c
1xkhC01
C:169-272
[
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Pfam Domains
(2, 6)
Info
all PFAM domains
1a: PFAM_TonB_dep_Rec_1xkhC01 (C:570-814)
1b: PFAM_TonB_dep_Rec_1xkhC02 (C:570-814)
1c: PFAM_TonB_dep_Rec_1xkhC03 (C:570-814)
2a: PFAM_Plug_1xkhC04 (C:161-265)
2b: PFAM_Plug_1xkhC05 (C:161-265)
2c: PFAM_Plug_1xkhC06 (C:161-265)
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(
)
(
)
Clan
:
MBB
(97)
Family
:
TonB_dep_Rec
(26)
Pseudomonas aeruginosa
(10)
1a
TonB_dep_Rec-1xkhC01
C:570-814
1b
TonB_dep_Rec-1xkhC02
C:570-814
1c
TonB_dep_Rec-1xkhC03
C:570-814
Clan
:
Ubiquitin
(279)
Family
:
Plug
(26)
Pseudomonas aeruginosa
(10)
2a
Plug-1xkhC04
C:161-265
2b
Plug-1xkhC05
C:161-265
2c
Plug-1xkhC06
C:161-265
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Asymmetric Unit 1
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Asym.Unit (350 KB)
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