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1XJD
Asym. Unit
Info
Asym.Unit (57 KB)
Biol.Unit 1 (52 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PKC-THETA COMPLEXED WITH STAUROSPORINE AT 2A RESOLUTION
Authors
:
Z. B. Xu
Date
:
23 Sep 04 (Deposition) - 19 Oct 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Kinase, Pkc-Theta, Atp, Amp, , Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. B. Xu, D. Chaudhary, S. Olland, S. Wolfrom, R. Czerwinski, K. Malakian, L. Lin, M. L. Stahl, D. Joseph-Mccarthy, C. Benander, L. Fitz, R. Greco, W. S. Somers, L. Mosyak
Catalytic Domain Crystal Structure Of Protein Kinase C-Theta (Pkctheta)
J. Biol. Chem. V. 279 50401 2004
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(3, 3)
Info
All Hetero Components
1a: PHOSPHOSERINE (SEPa)
2a: STAUROSPORINE (STUa)
3a: PHOSPHOTHREONINE (TPOa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
2
STU
1
Ligand/Ion
STAUROSPORINE
3
TPO
1
Mod. Amino Acid
PHOSPHOTHREONINE
[
close Hetero Component info
]
Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:60 , LEU A:386 , GLY A:387 , LYS A:388 , GLY A:389 , VAL A:394 , ALA A:407 , LYS A:409 , MET A:458 , GLU A:459 , TYR A:460 , LEU A:461 , ASP A:465 , ASP A:508 , ASN A:509 , LEU A:511 , ASP A:522
BINDING SITE FOR RESIDUE STU A 200
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:386-409)
2: PROTEIN_KINASE_ST (A:500-512)
3: AGC_KINASE_CTER (A:635-696)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
KPCT_HUMAN
386-409
1
A:386-409
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
KPCT_HUMAN
500-512
1
A:500-512
3
AGC_KINASE_CTER
PS51285
AGC-kinase C-terminal domain profile.
KPCT_HUMAN
635-706
1
A:635-696
[
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]
Exons
(8, 8)
Info
All Exons
Exon 1.12 (A:377-393)
Exon 1.13 (A:394-451)
Exon 1.14 (A:452-482)
Exon 1.15 (A:482-503)
Exon 1.16 (A:503-549)
Exon 1.17 (A:550-612)
Exon 1.18 (A:613-649)
Exon 1.19c (A:688-696)
View:
Select:
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All Exon Boundaries
1: Boundary 1.11/1.12
2: Boundary 1.12/1.13
3: Boundary 1.13/1.14
4: Boundary 1.14/1.15
5: Boundary 1.15/1.16
6: Boundary 1.16/1.17
7: Boundary 1.17/1.18
8: Boundary 1.18/1.19c
9: Boundary 1.19c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000263125
1a
ENSE00001917225
chr10:
6622263-6622173
91
KPCT_HUMAN
-
0
0
-
-
1.2
ENST00000263125
2
ENSE00001427000
chr10:
6557106-6556980
127
KPCT_HUMAN
1-40
40
0
-
-
1.3
ENST00000263125
3
ENSE00000689363
chr10:
6553156-6552957
200
KPCT_HUMAN
40-106
67
0
-
-
1.4
ENST00000263125
4
ENSE00000689362
chr10:
6549458-6549398
61
KPCT_HUMAN
107-127
21
0
-
-
1.5
ENST00000263125
5
ENSE00000837256
chr10:
6540520-6540358
163
KPCT_HUMAN
127-181
55
0
-
-
1.6
ENST00000263125
6
ENSE00000689360
chr10:
6539213-6539182
32
KPCT_HUMAN
181-192
12
0
-
-
1.7
ENST00000263125
7
ENSE00000689359
chr10:
6539082-6538997
86
KPCT_HUMAN
192-220
29
0
-
-
1.8
ENST00000263125
8
ENSE00000689358
chr10:
6533774-6533645
130
KPCT_HUMAN
221-264
44
0
-
-
1.10
ENST00000263125
10
ENSE00000464823
chr10:
6528106-6527997
110
KPCT_HUMAN
264-300
37
0
-
-
1.11
ENST00000263125
11
ENSE00000689357
chr10:
6527231-6527114
118
KPCT_HUMAN
301-340
40
0
-
-
1.12
ENST00000263125
12
ENSE00000689356
chr10:
6525562-6525402
161
KPCT_HUMAN
340-393
54
1
A:377-393
17
1.13
ENST00000263125
13
ENSE00000689355
chr10:
6521127-6520954
174
KPCT_HUMAN
394-451
58
1
A:394-451
58
1.14
ENST00000263125
14
ENSE00000689354
chr10:
6506366-6506275
92
KPCT_HUMAN
452-482
31
1
A:452-482
31
1.15
ENST00000263125
15
ENSE00000689352
chr10:
6504327-6504265
63
KPCT_HUMAN
482-503
22
1
A:482-503
22
1.16
ENST00000263125
16
ENSE00000689351
chr10:
6498774-6498636
139
KPCT_HUMAN
503-549
47
1
A:503-549
47
1.17
ENST00000263125
17
ENSE00000689350
chr10:
6484043-6483855
189
KPCT_HUMAN
550-612
63
1
A:550-612
63
1.18
ENST00000263125
18
ENSE00000689349
chr10:
6472900-6472772
129
KPCT_HUMAN
613-655
43
1
A:613-649
37
1.19c
ENST00000263125
19c
ENSE00001905967
chr10:
6470324-6469105
1220
KPCT_HUMAN
656-706
51
1
A:688-696
9
[
close EXON info
]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1xjda_ (A:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
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(
)
(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Protein kinase C, theta type
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1xjda_
A:
[
close SCOP info
]
CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1xjdA01 (A:377-464)
2a: CATH_1xjdA02 (A:465-696)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
1xjdA01
A:377-464
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
1xjdA02
A:465-696
[
close CATH info
]
Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Pkinase_1xjdA01 (A:380-634)
2a: PFAM_Pkinase_C_1xjdA02 (A:688-696)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
1a
Pkinase-1xjdA01
A:380-634
Clan
:
no clan defined [family: Pkinase_C]
(22)
Family
:
Pkinase_C
(22)
Homo sapiens (Human)
(21)
2a
Pkinase_C-1xjdA02
A:688-696
[
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]
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Chain A
Asymmetric Unit 1
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