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1XHM
Asym. Unit
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Asym.Unit (68 KB)
Biol.Unit 1 (64 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF A BIOLOGICALLY ACTIVE PEPTIDE (SIGK) BOUND TO A G PROTEIN BETA:GAMMA HETERODIMER
Authors
:
T. L. Davis, T. M. Bonacci, A. V. Smrcka, S. R. Sprang
Date
:
20 Sep 04 (Deposition) - 09 Aug 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Wd40 Repeat, Beta-Propeller, Protein-Peptide Complex, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. L. Davis, T. M. Bonacci, S. R. Sprang, A. V. Smrcka
Structural And Molecular Characterization Of A Preferred Protein Interaction Surface On G Protein Betagamma Subunits.
Biochemistry V. 44 10593 2005
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: WD_REPEATS_1 (A:70-84|A:157-171|A:285-299)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
WD_REPEATS_1
PS00678
Trp-Asp (WD) repeats signature.
GBB1_BOVIN
70-84
157-171
285-299
3
A:70-84
A:157-171
A:285-299
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Exons
(11, 11)
Info
All Exons
Exon 1.3 (B:7-29)
Exon 1.4 (B:30-52)
Exon 2.3 (A:2-19)
Exon 2.4 (A:20-32)
Exon 2.5 (A:33-68)
Exon 2.6 (A:68-89)
Exon 2.7 (A:90-144)
Exon 2.8 (A:144-166)
Exon 2.9 (A:166-233)
Exon 2.10 (A:234-306)
Exon 2.11 (A:306-340)
View:
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All Exon Boundaries
01: Boundary 1.2/1.3
02: Boundary 1.3/1.4
03: Boundary 1.4/-
04: Boundary 2.1/2.3
05: Boundary 2.3/2.4
06: Boundary 2.4/2.5
07: Boundary 2.5/2.6
08: Boundary 2.6/2.7
09: Boundary 2.7/2.8
10: Boundary 2.8/2.9
11: Boundary 2.9/2.10
12: Boundary 2.10/2.11
13: Boundary 2.11/2.12b
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000003959
1
ENSBTAE00000426893
chr10:
44963483-44963676
194
GBG2_BOVIN
-
0
0
-
-
1.2
ENSBTAT00000003959
2
ENSBTAE00000334135
chr10:
44982173-44982213
41
GBG2_BOVIN
-
0
0
-
-
1.3
ENSBTAT00000003959
3
ENSBTAE00000031865
chr10:
45110571-45110684
114
GBG2_BOVIN
1-29
29
1
B:7-29
23
1.4
ENSBTAT00000003959
4
ENSBTAE00000031866
chr10:
45131763-45132218
456
GBG2_BOVIN
30-71
42
1
B:30-52
23
2.1
ENSBTAT00000045065
1
ENSBTAE00000334067
chr16:
48127959-48128171
213
GBB1_BOVIN
-
0
0
-
-
2.3
ENSBTAT00000045065
3
ENSBTAE00000002006
chr16:
48183972-48184074
103
GBB1_BOVIN
1-19
19
1
A:2-19
18
2.4
ENSBTAT00000045065
4
ENSBTAE00000002007
chr16:
48187973-48188011
39
GBB1_BOVIN
20-32
13
1
A:20-32
13
2.5
ENSBTAT00000045065
5
ENSBTAE00000376692
chr16:
48189546-48189652
107
GBB1_BOVIN
33-68
36
1
A:33-68
36
2.6
ENSBTAT00000045065
6
ENSBTAE00000386769
chr16:
48193508-48193571
64
GBB1_BOVIN
68-89
22
1
A:68-89
22
2.7
ENSBTAT00000045065
7
ENSBTAE00000002010
chr16:
48194640-48194802
163
GBB1_BOVIN
90-144
55
1
A:90-144
55
2.8
ENSBTAT00000045065
8
ENSBTAE00000394803
chr16:
48200709-48200775
67
GBB1_BOVIN
144-166
23
1
A:144-166
23
2.9
ENSBTAT00000045065
9
ENSBTAE00000002012
chr16:
48202132-48202333
202
GBB1_BOVIN
166-233
68
1
A:166-233
68
2.10
ENSBTAT00000045065
10
ENSBTAE00000388531
chr16:
48203047-48203263
217
GBB1_BOVIN
234-306
73
1
A:234-306
73
2.11
ENSBTAT00000045065
11
ENSBTAE00000002014
chr16:
48203934-48204049
116
GBB1_BOVIN
306-340
35
1
A:306-340
35
2.12b
ENSBTAT00000045065
12b
ENSBTAE00000334058
chr16:
48204269-48205916
1648
GBB1_BOVIN
-
0
0
-
-
[
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1xhmb_ (B:)
2a: SCOP_d1xhma_ (A:)
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)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Non-globular all-alpha subunits of globular proteins
(135)
Superfamily
:
Transducin (heterotrimeric G protein), gamma chain
(19)
Family
:
Transducin (heterotrimeric G protein), gamma chain
(19)
Protein domain
:
Transducin (heterotrimeric G protein), gamma chain
(19)
Cow (Bos taurus) [TaxId: 9913]
(19)
1a
d1xhmb_
B:
Class
:
All beta proteins
(24004)
Fold
:
7-bladed beta-propeller
(245)
Superfamily
:
WD40 repeat-like
(95)
Family
:
WD40-repeat
(53)
Protein domain
:
beta1-subunit of the signal-transducing G protein heterotrimer
(19)
Cow (Bos taurus) [TaxId: 9913]
(19)
2a
d1xhma_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1xhmA00 (A:2-340)
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(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
7 Propellor
(136)
Topology
:
Methylamine Dehydrogenase; Chain H
(136)
Homologous Superfamily
:
YVTN repeat-like/Quinoprotein amine dehydrogenase
(76)
Cattle (Bos taurus)
(18)
1a
1xhmA00
A:2-340
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Pfam Domains
(2, 8)
Info
all PFAM domains
1a: PFAM_WD40_1xhmA01 (A:304-340)
1b: PFAM_WD40_1xhmA02 (A:304-340)
1c: PFAM_WD40_1xhmA03 (A:304-340)
1d: PFAM_WD40_1xhmA04 (A:304-340)
1e: PFAM_WD40_1xhmA05 (A:304-340)
1f: PFAM_WD40_1xhmA06 (A:304-340)
1g: PFAM_WD40_1xhmA07 (A:304-340)
2a: PFAM_G_gamma_1xhmB01 (B:7-52)
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Clans
(
)
(
)
Families
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(
)
Organisms
(
)
(
)
Clan
:
Beta_propeller
(192)
Family
:
WD40
(64)
Bos taurus (Bovine)
(19)
1a
WD40-1xhmA01
A:304-340
1b
WD40-1xhmA02
A:304-340
1c
WD40-1xhmA03
A:304-340
1d
WD40-1xhmA04
A:304-340
1e
WD40-1xhmA05
A:304-340
1f
WD40-1xhmA06
A:304-340
1g
WD40-1xhmA07
A:304-340
Clan
:
no clan defined [family: G-gamma]
(10)
Family
:
G-gamma
(10)
Bos taurus (Bovine)
(9)
2a
G-gamma-1xhmB01
B:7-52
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