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1XFB
Asym. Unit
Info
Asym.Unit (590 KB)
Biol.Unit 1 (198 KB)
Biol.Unit 2 (199 KB)
Biol.Unit 3 (200 KB)
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(1)
Title
:
HUMAN BRAIN FRUCTOSE 1,6-(BIS)PHOSPHATE ALDOLASE (C ISOZYME)
Authors
:
T. L. Arakaki, J. A. Pezza, M. A. Cronin, C. E. Hopkins, D. B. Zimmer, D. R. Tolan, K. N. Allen
Date
:
14 Sep 04 (Deposition) - 08 Feb 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Biol. Unit 3: I,J,K,L (1x)
Keywords
:
Isozyme Specificity, Structural Enzymology, Protein-Protein Interactions, Isozyme Specific Residues, Structure/Function, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. L. Arakaki, J. A. Pezza, M. A. Cronin, C. E. Hopkins, D. B. Zimmer, D. R. Tolan, K. N. Allen
Structure Of Human Brain Fructose 1, 6-(Bis)Phosphate Aldolase: Linking Isozyme Structure With Function
Protein Sci. V. 13 3077 2004
(for further references see the
PDB file header
)
[
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]
Hetero Components
(0, 0)
Info
All Hetero Components
View:
Select:
Label:
Sorry, no Info available
[
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]
Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 12)
Info
All PROSITE Patterns/Profiles
1: ALDOLASE_CLASS_I (A:222-232,B:222-232,C:222-232,D:22...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ALDOLASE_CLASS_I
PS00158
Fructose-bisphosphate aldolase class-I active site.
ALDOC_HUMAN
222-232
12
A:222-232
B:222-232
C:222-232
D:222-232
E:222-232
F:222-232
G:222-232
H:222-232
I:222-232
J:222-232
K:222-232
L:222-232
[
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]
Exons
(8, 96)
Info
All Exons
Exon 1.4b (A:3-38 | B:3-38 | C:3-38 | D:3-38 ...)
Exon 1.5 (A:38-108 | B:38-108 | C:38-108 | D...)
Exon 1.6 (A:109-127 | B:109-127 | C:109-127 ...)
Exon 1.7b (A:127-180 | B:127-180 | C:127-180 ...)
Exon 1.8 (A:181-208 | B:181-208 | C:181-208 ...)
Exon 1.9 (A:209-267 | B:209-267 | C:209-267 ...)
Exon 1.10 (A:267-333 | B:267-333 | C:267-333 ...)
Exon 1.11 (A:334-344 | B:334-344 | C:334-344 ...)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.3/1.4b
2: Boundary 1.4b/1.5
3: Boundary 1.5/1.6
4: Boundary 1.6/1.7b
5: Boundary 1.7b/1.8
6: Boundary 1.8/1.9
7: Boundary 1.9/1.10
8: Boundary 1.10/1.11
9: Boundary 1.11/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000395321
1a
ENSE00001521359
chr17:
26903952-26903819
134
ALDOC_HUMAN
-
0
0
-
-
1.3
ENST00000395321
3
ENSE00001521352
chr17:
26903038-26902983
56
ALDOC_HUMAN
-
0
0
-
-
1.4b
ENST00000395321
4b
ENSE00000866299
chr17:
26902562-26902439
124
ALDOC_HUMAN
1-38
38
12
A:3-38
B:3-38
C:3-38
D:3-38
E:3-38
F:3-38
G:3-38
H:3-38
I:3-38
J:3-38
K:3-38
L:3-38
36
36
36
36
36
36
36
36
36
36
36
36
1.5
ENST00000395321
5
ENSE00000866298
chr17:
26902352-26902141
212
ALDOC_HUMAN
38-108
71
12
A:38-108
B:38-108
C:38-108
D:38-108
E:38-108
F:38-108
G:38-108
H:38-108
I:38-108
J:38-108
K:38-108
L:38-108
71
71
71
71
71
71
71
71
71
71
71
71
1.6
ENST00000395321
6
ENSE00000706772
chr17:
26902024-26901970
55
ALDOC_HUMAN
109-127
19
12
A:109-127
B:109-127
C:109-127
D:109-127
E:109-127
F:109-127
G:109-127
H:109-127
I:109-127
J:109-127
K:109-127
L:109-127
19
19
19
19
19
19
19
19
19
19
19
19
1.7b
ENST00000395321
7b
ENSE00001805194
chr17:
26901874-26901714
161
ALDOC_HUMAN
127-180
54
12
A:127-180
B:127-180
C:127-180
D:127-180
E:127-180
F:127-180
G:127-180
H:127-180
I:127-180
J:127-180
K:127-180
L:127-180
54
54
54
54
54
54
54
54
54
54
54
54
1.8
ENST00000395321
8
ENSE00001656772
chr17:
26901595-26901512
84
ALDOC_HUMAN
181-208
28
12
A:181-208
B:181-208
C:181-208
D:181-208
E:181-208
F:181-208
G:181-208
H:181-208
I:181-208
J:181-208
K:181-208
L:181-208
28
28
28
28
28
28
28
28
28
28
28
28
1.9
ENST00000395321
9
ENSE00001726461
chr17:
26901259-26901085
175
ALDOC_HUMAN
209-267
59
12
A:209-267
B:209-267
C:209-267
D:209-267
E:209-267
F:209-267
G:209-267
H:209-267
I:209-267
J:209-267
K:209-267
L:209-267
59
59
59
59
59
59
59
59
59
59
59
59
1.10
ENST00000395321
10
ENSE00000706694
chr17:
26900952-26900753
200
ALDOC_HUMAN
267-333
67
12
A:267-333
B:267-333
C:267-333
D:267-333
E:267-333
F:267-333
G:267-333
H:267-333
I:267-333
J:267-333
K:267-333
L:267-333
67
67
67
67
67
67
67
67
67
67
67
67
1.11
ENST00000395321
11
ENSE00001521351
chr17:
26900639-26900133
507
ALDOC_HUMAN
334-364
31
12
A:334-344
B:334-344
C:334-344
D:334-344
E:334-344
F:334-344
G:334-344
H:334-344
I:334-344
J:334-344
K:334-344
L:334-344
11
11
11
11
11
11
11
11
11
11
11
11
[
close EXON info
]
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1xfbb_ (B:)
1b: SCOP_d1xfbc_ (C:)
1c: SCOP_d1xfbl_ (L:)
1d: SCOP_d1xfbd_ (D:)
1e: SCOP_d1xfbe_ (E:)
1f: SCOP_d1xfbf_ (F:)
1g: SCOP_d1xfbg_ (G:)
1h: SCOP_d1xfbh_ (H:)
1i: SCOP_d1xfbi_ (I:)
1j: SCOP_d1xfbj_ (J:)
1k: SCOP_d1xfbk_ (K:)
2a: SCOP_d1xfba1 (A:3-344)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Aldolase
(457)
Family
:
Class I aldolase
(182)
Protein domain
:
automated matches
(54)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1xfbb_
B:
1b
d1xfbc_
C:
1c
d1xfbl_
L:
1d
d1xfbd_
D:
1e
d1xfbe_
E:
1f
d1xfbf_
F:
1g
d1xfbg_
G:
1h
d1xfbh_
H:
1i
d1xfbi_
I:
1j
d1xfbj_
J:
1k
d1xfbk_
K:
Protein domain
:
Fructose-1,6-bisphosphate aldolase
(39)
Human (Homo sapiens), brain isozyme [TaxId: 9606]
(1)
2a
d1xfba1
A:3-344
[
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]
CATH Domains
(1, 12)
Info
all CATH domains
1a: CATH_1xfbA00 (A:3-344)
1b: CATH_1xfbB00 (B:3-344)
1c: CATH_1xfbC00 (C:3-344)
1d: CATH_1xfbD00 (D:3-344)
1e: CATH_1xfbE00 (E:3-344)
1f: CATH_1xfbF00 (F:3-344)
1g: CATH_1xfbG00 (G:3-344)
1h: CATH_1xfbH00 (H:3-344)
1i: CATH_1xfbI00 (I:3-344)
1j: CATH_1xfbJ00 (J:3-344)
1k: CATH_1xfbK00 (K:3-344)
1l: CATH_1xfbL00 (L:3-344)
View:
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(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Aldolase class I
(887)
Human (Homo sapiens)
(78)
1a
1xfbA00
A:3-344
1b
1xfbB00
B:3-344
1c
1xfbC00
C:3-344
1d
1xfbD00
D:3-344
1e
1xfbE00
E:3-344
1f
1xfbF00
F:3-344
1g
1xfbG00
G:3-344
1h
1xfbH00
H:3-344
1i
1xfbI00
I:3-344
1j
1xfbJ00
J:3-344
1k
1xfbK00
K:3-344
1l
1xfbL00
L:3-344
[
close CATH info
]
Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_Glycolytic_1xfbL01 (L:15-344)
1b: PFAM_Glycolytic_1xfbL02 (L:15-344)
1c: PFAM_Glycolytic_1xfbL03 (L:15-344)
1d: PFAM_Glycolytic_1xfbL04 (L:15-344)
1e: PFAM_Glycolytic_1xfbL05 (L:15-344)
1f: PFAM_Glycolytic_1xfbL06 (L:15-344)
1g: PFAM_Glycolytic_1xfbL07 (L:15-344)
1h: PFAM_Glycolytic_1xfbL08 (L:15-344)
1i: PFAM_Glycolytic_1xfbL09 (L:15-344)
1j: PFAM_Glycolytic_1xfbL10 (L:15-344)
1k: PFAM_Glycolytic_1xfbL11 (L:15-344)
1l: PFAM_Glycolytic_1xfbL12 (L:15-344)
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(
)
(
)
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(
)
(
)
Clan
:
no clan defined [family: Glycolytic]
(21)
Family
:
Glycolytic
(21)
Homo sapiens (Human)
(4)
1a
Glycolytic-1xfbL01
L:15-344
1b
Glycolytic-1xfbL02
L:15-344
1c
Glycolytic-1xfbL03
L:15-344
1d
Glycolytic-1xfbL04
L:15-344
1e
Glycolytic-1xfbL05
L:15-344
1f
Glycolytic-1xfbL06
L:15-344
1g
Glycolytic-1xfbL07
L:15-344
1h
Glycolytic-1xfbL08
L:15-344
1i
Glycolytic-1xfbL09
L:15-344
1j
Glycolytic-1xfbL10
L:15-344
1k
Glycolytic-1xfbL11
L:15-344
1l
Glycolytic-1xfbL12
L:15-344
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