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Asym. Unit
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Asym.Unit (24 KB)
Biol.Unit 1 (21 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE CYTOPLASMIC DISTAL C-TERMINAL DOMAIN OF OCCLUDIN
Authors
:
Y. Li, A. S. Fanning, J. M. Anderson, A. Lavie
Date
:
26 Aug 04 (Deposition) - 06 Sep 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.45
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Coiled-Coil, Cell Adhesion
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Li, A. S. Fanning, J. M. Anderson, A. Lavie
Structure Of The Conserved Cytoplasmic C-Terminal Domain Of Occludin: Identification Of The Zo-1 Binding Surface.
J. Mol. Biol. V. 352 151 2005
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(4, 4)
Info
All Exons
Exon 1.7c (A:416-418)
Exon 1.8 (A:418-475)
Exon 1.9 (A:476-489)
Exon 1.10a (A:490-522)
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All Exon Boundaries
1: Boundary 1.6/1.7c
2: Boundary 1.7c/1.8
3: Boundary 1.8/1.9
4: Boundary 1.9/1.10a
5: Boundary 1.10a/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000396442
2a
ENSE00002074220
chr5:
68788617-68788727
111
OCLN_HUMAN
-
0
0
-
-
1.3
ENST00000396442
3
ENSE00001007952
chr5:
68800004-68800121
118
OCLN_HUMAN
1-17
17
0
-
-
1.4
ENST00000396442
4
ENSE00001486184
chr5:
68804968-68805646
679
OCLN_HUMAN
17-243
227
0
-
-
1.5
ENST00000396442
5
ENSE00001486183
chr5:
68809775-68809936
162
OCLN_HUMAN
244-297
54
0
-
-
1.6
ENST00000396442
6
ENSE00001740502
chr5:
68830521-68830666
146
OCLN_HUMAN
298-346
49
0
-
-
1.7c
ENST00000396442
7c
ENSE00001600578
chr5:
68840731-68840946
216
OCLN_HUMAN
346-418
73
1
A:416-418
3
1.8
ENST00000396442
8
ENSE00001660075
chr5:
68843757-68843928
172
OCLN_HUMAN
418-475
58
1
A:418-475
58
1.9
ENST00000396442
9
ENSE00001667294
chr5:
68847371-68847412
42
OCLN_HUMAN
476-489
14
1
A:476-489
14
1.10a
ENST00000396442
10a
ENSE00002050990
chr5:
68849397-68849498
102
OCLN_HUMAN
490-522
33
1
A:490-522
33
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1xawa1 (A:416-522)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Coiled coil proteins
(689)
Fold
:
Antiparallel coiled-coil
(45)
Superfamily
:
occludin/ELL-like
(3)
Family
:
Occludin/ELL domain
(3)
Protein domain
:
Occludin
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1xawa1
A:416-522
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CATH Domains
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_Occludin_ELL_1xawA01 (A:420-519)
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(
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Clan
:
no clan defined [family: Occludin_ELL]
(2)
Family
:
Occludin_ELL
(2)
Homo sapiens (Human)
(2)
1a
Occludin_ELL-1xawA01
A:420-519
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