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1X8I
Asym. Unit
Info
Asym.Unit (49 KB)
Biol.Unit 1 (43 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ZINC CARBAPENEMASE CPHA IN COMPLEX WITH THE ANTIBIOTIC BIAPENEM
Authors
:
G. Garau, O. Dideberg
Date
:
18 Aug 04 (Deposition) - 28 Dec 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Garau, C. Bebrone, C. Anne, M. Galleni, J. M. Frere, O. Dideberg
A Metallo-Beta-Lactamase Enzyme In Action: Crystal Structures Of The Monozinc Carbapenemase Cpha And Its Complex With Biapenem
J. Mol. Biol. V. 345 785 2005
(for further references see the
PDB file header
)
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Hetero Components
(4, 9)
Info
All Hetero Components
1a: 5H-PYRAZOLO(1,2-A)(1,2,4)TRIAZOL-4... (BMHa)
2a: GLYCEROL (GOLa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
4a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMH
1
Ligand/Ion
5H-PYRAZOLO(1,2-A)(1,2,4)TRIAZOL-4-IUM, 6-((2-CARBOXY-6-(1-HYDROXYETHYL)-4-METHYL-7-OXO-1-AZABICYCLO(3.2.0)HEPT-2-EN-3-YL)THIO)-6,7-DIHYDRO-, HYDROXIDE, INNERSALT, (4R-(4ALPHA,5BETA,6BETA(R*)))-
2
GOL
1
Ligand/Ion
GLYCEROL
3
SO4
6
Ligand/Ion
SULFATE ION
4
ZN
1
Ligand/Ion
ZINC ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
BMH A:2 , ASP A:120 , CYS A:221 , HIS A:263
BINDING SITE FOR RESIDUE ZN A 401
2
AC2
SOFTWARE
ARG A:140 , HOH A:484
BINDING SITE FOR RESIDUE SO4 A 4
3
AC3
SOFTWARE
ARG A:143 , LYS A:147 , LEU A:171
BINDING SITE FOR RESIDUE SO4 A 5
4
AC4
SOFTWARE
LYS A:97 , ARG A:102 , LYS A:257 , HOH A:438 , HOH A:443 , HOH A:588
BINDING SITE FOR RESIDUE SO4 A 6
5
AC5
SOFTWARE
LYS A:129 , VAL A:170 , LEU A:171 , LYS A:302 , HOH A:445 , HOH A:498 , HOH A:509
BINDING SITE FOR RESIDUE SO4 A 7
6
AC6
SOFTWARE
SER A:104 , ARG A:105 , LYS A:106 , LEU A:267 , HOH A:416
BINDING SITE FOR RESIDUE SO4 A 8
7
AC7
SOFTWARE
HIS A:176 , ASP A:177 , GLY A:178
BINDING SITE FOR RESIDUE SO4 A 9
8
AC8
SOFTWARE
VAL A:67 , THR A:119 , ASP A:120 , PHE A:156 , THR A:157 , HIS A:196 , CYS A:221 , LYS A:224 , ASN A:233 , HIS A:263 , ZN A:401 , HOH A:403 , HOH A:544
BINDING SITE FOR RESIDUE BMH A 2
9
AC9
SOFTWARE
LYS A:250 , PRO A:291 , ASP A:295 , HOH A:422 , HOH A:523
BINDING SITE FOR RESIDUE GOL A 3
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: BETA_LACTAMASE_B_1 (A:113-133)
2: BETA_LACTAMASE_B_2 (A:209-224)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BETA_LACTAMASE_B_1
PS00743
Beta-lactamases class B signature 1.
BLAB_AERHY
92-111
1
A:113-133
2
BETA_LACTAMASE_B_2
PS00744
Beta-lactamases class B signature 2.
BLAB_AERHY
184-196
1
A:209-224
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1x8ia_ (A:)
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)
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)
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)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Metallo-hydrolase/oxidoreductase
(184)
Superfamily
:
Metallo-hydrolase/oxidoreductase
(184)
Family
:
Zn metallo-beta-lactamase
(93)
Protein domain
:
Zn metallo-beta-lactamase
(63)
Aeromonas hydrophila, CphA [TaxId: 644]
(11)
1a
d1x8ia_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Lactamase_B_1x8iA01 (A:59-263)
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Clans
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Families
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(
)
Organisms
(
)
(
)
Clan
:
Metallo-HOrase
(67)
Family
:
Lactamase_B
(53)
Aeromonas hydrophila
(4)
1a
Lactamase_B-1x8iA01
A:59-263
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Chain A
Asymmetric Unit 1
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Asym.Unit (49 KB)
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