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1X7R
Biol. Unit 1
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Asym.Unit (47 KB)
Biol.Unit 1 (84 KB)
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Title
:
CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR ALPHA COMPLEXED WITH GENISTEIN
Authors
:
E. S. Manas, Z. B. Xu, R. J. Unwalla, W. S. Somers
Date
:
16 Aug 04 (Deposition) - 01 Mar 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Estrogen Receptor, Estrogen Receptor Beta, Er-Beta, Er, Estrogen Receptor Alpha, Er-Alpha, Estrogen, Nuclear Recept Transcription Factor, Agonist
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. S. Manas, Z. B. Xu, R. J. Unwalla, W. S. Somers
Understanding The Selectivity Of Genistein For Human Estrogen Receptor-Beta Using X-Ray Crystallography And Computational Methods
Structure V. 12 2197 2004
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: GENISTEIN (GENa)
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Label:
No.
Name
Count
Type
Full Name
1
GEN
2
Ligand/Ion
GENISTEIN
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:7 , MET A:343 , LEU A:346 , GLU A:353 , LEU A:387 , ARG A:394 , ILE A:424 , HIS A:524 , LEU A:525
BINDING SITE FOR RESIDUE GEN A 201
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_004672 (V364E, chain A, )
2: VAR_070072 (Q375H, chain A, )
3: VAR_004673 (V400V, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_004672
V
364
E
ESR1_HUMAN
Disease (ESTRR)
---
A
V
364
E
2
UniProt
VAR_070072
Q
375
H
ESR1_HUMAN
Disease (ESTRR)
---
A
Q
375
H
3
UniProt
VAR_004673
G
400
V
ESR1_HUMAN
Unclassified
---
A
V
400
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
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1a: SCOP_d1x7ra_ (A:)
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Class
:
All alpha proteins
(14657)
Fold
:
Nuclear receptor ligand-binding domain
(609)
Superfamily
:
Nuclear receptor ligand-binding domain
(609)
Family
:
Nuclear receptor ligand-binding domain
(598)
Protein domain
:
Estrogen receptor alpha
(60)
Human (Homo sapiens) [TaxId: 9606]
(60)
1a
d1x7ra_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1x7rA00 (A:306-547)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Retinoid X Receptor
(409)
Homologous Superfamily
:
Retinoid X Receptor
(409)
Human (Homo sapiens)
(337)
1a
1x7rA00
A:306-547
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_Hormone_recep_1x7rA01 (A:325-543)
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Clan
:
no clan defined [family: Hormone_recep]
(290)
Family
:
Hormone_recep
(290)
Homo sapiens (Human)
(244)
1a
Hormone_recep-1x7rA01
A:325-543
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