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1X6F
Asym. Unit
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Asym.Unit (467 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURES OF THE C2H2 TYPE ZINC FINGER DOMAIN OF HUMAN ZINC FINGER PROTEIN 462
Authors
:
M. Sato, K. Saito, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
17 May 05 (Deposition) - 17 Nov 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Zinc Finger Domain, Kiaa1803, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Dna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
M. Sato, K. Saito, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structures Of The C2H2 Type Zinc Finger Domain Of Human Zinc Finger Protein 462
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ZN
1
Ligand/Ion
ZINC ION
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:28 , CYS A:31 , HIS A:44 , HIS A:48
BINDING SITE FOR RESIDUE ZN A 201
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZINC_FINGER_C2H2_1 (-|-|-|-|-|A:28-48|-|-)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_FINGER_C2H2_1
PS00028
Zinc finger C2H2 type domain signature.
ZN462_HUMAN
110-131
472-492
888-909
1472-1493
1662-1683
1894-1914
2302-2322
2416-2436
1
-
-
-
-
-
A:28-48
-
-
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Exons
(3, 3)
Info
All Exons
Exon 1.3b (A:1-82)
Exon 1.4b (A:83-87)
Exon 1.6d (A:88-88)
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All Exon Boundaries
1: Boundary 1.2/1.3b
2: Boundary 1.3b/1.4b
3: Boundary 1.4b/1.6d
4: Boundary 1.6d/1.9
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000277225
1a
ENSE00001408250
chr9:
109625378-109625636
259
ZN462_HUMAN
-
0
0
-
-
1.2
ENST00000277225
2
ENSE00002169954
chr9:
109685635-109685884
250
ZN462_HUMAN
1-74
74
0
-
-
1.3b
ENST00000277225
3b
ENSE00001633746
chr9:
109686414-109692040
5627
ZN462_HUMAN
74-1949
1876
1
A:1-82
82
1.4b
ENST00000277225
4b
ENSE00000983378
chr9:
109692806-109692970
165
ZN462_HUMAN
1950-2004
55
1
A:83-87
5
1.6d
ENST00000277225
6d
ENSE00001023580
chr9:
109694727-109694830
104
ZN462_HUMAN
2005-2039
35
1
A:88-88
1
1.9
ENST00000277225
9
ENSE00000983380
chr9:
109697784-109697902
119
ZN462_HUMAN
2039-2079
41
0
-
-
1.10b
ENST00000277225
10b
ENSE00000983381
chr9:
109701197-109701388
192
ZN462_HUMAN
2079-2143
65
0
-
-
1.11b
ENST00000277225
11b
ENSE00000983382
chr9:
109734286-109734553
268
ZN462_HUMAN
2143-2232
90
0
-
-
1.12b
ENST00000277225
12b
ENSE00001023582
chr9:
109736418-109736554
137
ZN462_HUMAN
2232-2278
47
0
-
-
1.13
ENST00000277225
13
ENSE00001023581
chr9:
109746467-109746690
224
ZN462_HUMAN
2278-2352
75
0
-
-
1.15
ENST00000277225
15
ENSE00000983391
chr9:
109765575-109765707
133
ZN462_HUMAN
2353-2397
45
0
-
-
1.16b
ENST00000277225
16b
ENSE00000983392
chr9:
109771826-109771949
124
ZN462_HUMAN
2397-2438
42
0
-
-
1.17d
ENST00000277225
17d
ENSE00001464341
chr9:
109773104-109775915
2812
ZN462_HUMAN
2438-2506
69
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1x6fa1 (A:8-82)
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Protein Domains
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Organisms
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(
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Class
:
Small proteins
(3458)
Fold
:
beta-beta-alpha zinc fingers
(183)
Superfamily
:
beta-beta-alpha zinc fingers
(183)
Family
:
Classic zinc finger, C2H2
(162)
Protein domain
:
Zinc finger protein 462, ZNF462
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1x6fa1
A:8-82
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CATH Domains
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Pfam Domains
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