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Asym. Unit
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Asym.Unit (468 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SAM DOMAIN OF HUMAN ARAP2
Authors
:
A. Sasagawa, N. Tochio, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
12 May 05 (Deposition) - 12 Nov 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Asap-Related Protein2, Gtpase Activity, Signal Transduction, Sam Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Sasagawa, N. Tochio, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Sam Domain Of Human Arap2
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SAM_DOMAIN (A:17-77)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SAM_DOMAIN
PS50105
SAM domain profile.
ARAP2_HUMAN
10-70
1
A:17-77
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Exons
(1, 1)
Info
All Exons
Exon 1.3b (A:8-91 (gaps))
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All Exon Boundaries
1: Boundary 1.1/1.3b
2: Boundary 1.3b/1.4
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000303965
1
ENSE00001402822
chr4:
36246131-36245801
331
ARAP2_HUMAN
-
0
0
-
-
1.3b
ENST00000303965
3b
ENSE00002188443
chr4:
36231267-36230204
1064
ARAP2_HUMAN
1-302
302
1
A:8-91 (gaps)
110
1.4
ENST00000303965
4
ENSE00001171897
chr4:
36216102-36216044
59
ARAP2_HUMAN
302-322
21
0
-
-
1.5
ENST00000303965
5
ENSE00001171892
chr4:
36214941-36214865
77
ARAP2_HUMAN
322-347
26
0
-
-
1.6
ENST00000303965
6
ENSE00001172095
chr4:
36214109-36214018
92
ARAP2_HUMAN
348-378
31
0
-
-
1.7b
ENST00000303965
7b
ENSE00001171889
chr4:
36212365-36212012
354
ARAP2_HUMAN
378-496
119
0
-
-
1.9
ENST00000303965
9
ENSE00001171883
chr4:
36195269-36195200
70
ARAP2_HUMAN
496-519
24
0
-
-
1.10
ENST00000303965
10
ENSE00001171873
chr4:
36189193-36189073
121
ARAP2_HUMAN
520-560
41
0
-
-
1.11
ENST00000303965
11
ENSE00001209388
chr4:
36179627-36179449
179
ARAP2_HUMAN
560-619
60
0
-
-
1.12
ENST00000303965
12
ENSE00001171864
chr4:
36168669-36168554
116
ARAP2_HUMAN
620-658
39
0
-
-
1.13
ENST00000303965
13
ENSE00001171855
chr4:
36166735-36166536
200
ARAP2_HUMAN
658-725
68
0
-
-
1.14
ENST00000303965
14
ENSE00001171849
chr4:
36163172-36163087
86
ARAP2_HUMAN
725-753
29
0
-
-
1.15a
ENST00000303965
15a
ENSE00000709054
chr4:
36162263-36162081
183
ARAP2_HUMAN
754-814
61
0
-
-
1.16b
ENST00000303965
16b
ENSE00000709053
chr4:
36161127-36160953
175
ARAP2_HUMAN
815-873
59
0
-
-
1.17a
ENST00000303965
17a
ENSE00000709052
chr4:
36160486-36160352
135
ARAP2_HUMAN
873-918
46
0
-
-
1.19
ENST00000303965
19
ENSE00000709051
chr4:
36152666-36152522
145
ARAP2_HUMAN
918-966
49
0
-
-
1.20b
ENST00000303965
20b
ENSE00000709050
chr4:
36150129-36150027
103
ARAP2_HUMAN
966-1000
35
0
-
-
1.21
ENST00000303965
21
ENSE00000709049
chr4:
36149368-36149170
199
ARAP2_HUMAN
1001-1067
67
0
-
-
1.22
ENST00000303965
22
ENSE00001171843
chr4:
36148981-36148918
64
ARAP2_HUMAN
1067-1088
22
0
-
-
1.23
ENST00000303965
23
ENSE00001171837
chr4:
36135011-36134848
164
ARAP2_HUMAN
1088-1143
56
0
-
-
1.24
ENST00000303965
24
ENSE00001171830
chr4:
36130367-36130155
213
ARAP2_HUMAN
1143-1214
72
0
-
-
1.25
ENST00000303965
25
ENSE00001171818
chr4:
36126589-36126484
106
ARAP2_HUMAN
1214-1249
36
0
-
-
1.26
ENST00000303965
26
ENSE00001171808
chr4:
36122948-36122801
148
ARAP2_HUMAN
1249-1298
50
0
-
-
1.27
ENST00000303965
27
ENSE00000709043
chr4:
36121340-36121272
69
ARAP2_HUMAN
1299-1321
23
0
-
-
1.28
ENST00000303965
28
ENSE00000709042
chr4:
36118757-36118683
75
ARAP2_HUMAN
1322-1346
25
0
-
-
1.29
ENST00000303965
29
ENSE00000709041
chr4:
36115909-36115792
118
ARAP2_HUMAN
1347-1386
40
0
-
-
1.30
ENST00000303965
30
ENSE00001171800
chr4:
36109315-36109187
129
ARAP2_HUMAN
1386-1429
44
0
-
-
1.31
ENST00000303965
31
ENSE00001171791
chr4:
36093642-36093503
140
ARAP2_HUMAN
1429-1475
47
0
-
-
1.32
ENST00000303965
32
ENSE00001073479
chr4:
36085072-36084990
83
ARAP2_HUMAN
1476-1503
28
0
-
-
1.33
ENST00000303965
33
ENSE00001171783
chr4:
36083908-36083873
36
ARAP2_HUMAN
1503-1515
13
0
-
-
1.34
ENST00000303965
34
ENSE00001171773
chr4:
36081901-36081838
64
ARAP2_HUMAN
1515-1536
22
0
-
-
1.35
ENST00000303965
35
ENSE00001073477
chr4:
36075445-36075311
135
ARAP2_HUMAN
1537-1581
45
0
-
-
1.36
ENST00000303965
36
ENSE00001073473
chr4:
36069900-36067620
2281
ARAP2_HUMAN
1582-1704
123
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1x40a1 (A:8-85)
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Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
SAM/Pointed domain
(61)
Family
:
SAM (sterile alpha motif) domain
(25)
Protein domain
:
Centaurin-delta 1 (Arap2)
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1x40a1
A:8-85
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CATH Domains
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_SAM_1_1x40A01 (A:15-74)
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Clan
:
SAM
(26)
Family
:
SAM_1
(8)
Homo sapiens (Human)
(5)
1a
SAM_1-1x40A01
A:15-74
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