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Asym. Unit
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Asym.Unit (556 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE DEATH DOMAIN OF NUCLEAR MATRIX PROTEIN P84
Authors
:
T. N. Niraula, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 Jan 05 (Deposition) - 28 Jul 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Death Domain, Structural Genomics, Nuclear Matrix, Riken Structural Genomics/Proteomics Initiative, Rsgi, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. N. Niraula, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Death Domain Of Nuclear Matrix Protein P84
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
Info
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: DEATH_DOMAIN (A:17-100)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DEATH_DOMAIN
PS50017
Death domain profile.
THOC1_HUMAN
570-653
1
A:17-100
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Exons
(2, 2)
Info
All Exons
Exon 1.20 (A:1-7 (gaps))
Exon 1.21 (A:7-104)
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All Exon Boundaries
1: Boundary 1.19/1.20
2: Boundary 1.20/1.21
3: Boundary 1.21/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000261600
1
ENSE00001208610
chr18:
268059-267966
94
THOC1_HUMAN
1-18
18
0
-
-
1.2
ENST00000261600
2
ENSE00001038000
chr18:
265530-265457
74
THOC1_HUMAN
19-43
25
0
-
-
1.3
ENST00000261600
3
ENSE00001038009
chr18:
265363-265303
61
THOC1_HUMAN
43-63
21
0
-
-
1.4
ENST00000261600
4
ENSE00001037998
chr18:
264092-264026
67
THOC1_HUMAN
64-86
23
0
-
-
1.5
ENST00000261600
5
ENSE00001038014
chr18:
260304-260186
119
THOC1_HUMAN
86-125
40
0
-
-
1.6
ENST00000261600
6
ENSE00001037993
chr18:
259730-259682
49
THOC1_HUMAN
126-142
17
0
-
-
1.7
ENST00000261600
7
ENSE00001037997
chr18:
259275-259180
96
THOC1_HUMAN
142-174
33
0
-
-
1.8
ENST00000261600
8
ENSE00000664704
chr18:
254355-254273
83
THOC1_HUMAN
174-201
28
0
-
-
1.9
ENST00000261600
9
ENSE00000664702
chr18:
252612-252539
74
THOC1_HUMAN
202-226
25
0
-
-
1.10
ENST00000261600
10
ENSE00000664700
chr18:
247957-247849
109
THOC1_HUMAN
226-262
37
0
-
-
1.11
ENST00000261600
11
ENSE00000664698
chr18:
246455-246324
132
THOC1_HUMAN
263-306
44
0
-
-
1.12
ENST00000261600
12
ENSE00000799451
chr18:
226901-226801
101
THOC1_HUMAN
307-340
34
0
-
-
1.13
ENST00000261600
13
ENSE00001248426
chr18:
225403-225337
67
THOC1_HUMAN
340-362
23
0
-
-
1.14
ENST00000261600
14
ENSE00000799449
chr18:
225139-225089
51
THOC1_HUMAN
363-379
17
0
-
-
1.15
ENST00000261600
15
ENSE00000799448
chr18:
224994-224924
71
THOC1_HUMAN
380-403
24
0
-
-
1.16
ENST00000261600
16
ENSE00000799447
chr18:
224179-224084
96
THOC1_HUMAN
403-435
33
0
-
-
1.17
ENST00000261600
17
ENSE00000799446
chr18:
223505-223440
66
THOC1_HUMAN
435-457
23
0
-
-
1.18
ENST00000261600
18
ENSE00000799445
chr18:
218969-218886
84
THOC1_HUMAN
457-485
29
0
-
-
1.19
ENST00000261600
19
ENSE00000799444
chr18:
216633-216486
148
THOC1_HUMAN
485-534
50
0
-
-
1.20
ENST00000261600
20
ENSE00000799443
chr18:
215504-215429
76
THOC1_HUMAN
535-560
26
1
A:1-7 (gaps)
18
1.21
ENST00000261600
21
ENSE00001208604
chr18:
214921-214527
395
THOC1_HUMAN
560-657
98
1
A:7-104
98
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SCOP Domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Death_1wxpA01 (A:18-100)
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Clan
:
Death
(18)
Family
:
Death
(11)
Homo sapiens (Human)
(7)
1a
Death-1wxpA01
A:18-100
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Asymmetric Unit 1
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