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Asym. Unit
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Asym.Unit (67 KB)
Biol.Unit 1 (62 KB)
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Title
:
CRYSTAL STRUCTURE OF THE OXY-FORM OF THE COPPER-BOUND STREPTOMYCES CASTANEOGLOBISPORUS TYROSINASE COMPLEXED WITH A CADDIE PROTEIN PREPARED BY THE ADDITION OF HYDROGENPEROXIDE
Authors
:
Y. Matoba, T. Kumagai, A. Yamamoto, H. Yoshitsu, M. Sugiyama
Date
:
19 Jan 05 (Deposition) - 31 Jan 06 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Tyrosinase, Binary Complex, Type-3 Copper, Dioxygen, Copper Transfer, Oxidoreductase-Metal Transport Complex
(Keyword Search:
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Reference
:
Y. Matoba, T. Kumagai, A. Yamamoto, H. Yoshitsu, M. Sugiyama
Crystallographic Evidence That The Dinuclear Copper Center Of Tyrosinase Is Flexible During Catalysis
J. Biol. Chem. V. 281 8981 2006
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Hetero Components
(3, 9)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
2a: NITRATE ION (NO3a)
2b: NITRATE ION (NO3b)
2c: NITRATE ION (NO3c)
2d: NITRATE ION (NO3d)
3a: PEROXIDE ION (PERa)
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No.
Name
Count
Type
Full Name
1
CU
4
Ligand/Ion
COPPER (II) ION
2
NO3
4
Ligand/Ion
NITRATE ION
3
PER
1
Ligand/Ion
PEROXIDE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:38 , HIS A:54 , HIS A:63 , CU A:401 , PER A:404
BINDING SITE FOR RESIDUE CU A 400
2
AC2
SOFTWARE
HIS A:190 , HIS A:194 , HIS A:216 , CU A:400 , PER A:404
BINDING SITE FOR RESIDUE CU A 401
3
AC3
SOFTWARE
ARG A:132 , VAL A:133 , ASP A:134 , ARG A:140 , GLN A:200 , THR A:203 , VAL A:205 , HOH A:553
BINDING SITE FOR RESIDUE NO3 A 405
4
AC4
SOFTWARE
TYR A:165 , TRP A:223 , TRP A:226 , GLN A:227 , ALA A:234 , TYR A:235 , LEU A:263
BINDING SITE FOR RESIDUE NO3 A 406
5
AC5
SOFTWARE
GLY A:125 , PRO A:128 , HOH A:568 , THR B:103 , ARG B:105 , ALA B:106 , ARG B:109 , HOH B:476
BINDING SITE FOR RESIDUE NO3 B 407
6
AC6
SOFTWARE
THR A:238 , GLY A:239 , ASP A:246 , LEU A:247 , ASN A:248 , LYS B:50 , HOH B:456
BINDING SITE FOR RESIDUE NO3 A 408
7
AC7
SOFTWARE
ILE A:42 , HIS B:82 , MET B:84 , HIS B:97 , HOH B:644
BINDING SITE FOR RESIDUE CU B 402
8
AC8
SOFTWARE
GLU A:175 , HIS A:180
BINDING SITE FOR RESIDUE CU A 403
9
AC9
SOFTWARE
HIS A:38 , HIS A:54 , HIS A:63 , HIS A:190 , HIS A:194 , PHE A:212 , HIS A:216 , CU A:400 , CU A:401 , TYR B:98
BINDING SITE FOR RESIDUE PER A 404
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1wx2a_ (A:)
2a: SCOP_d1wx2b_ (B:)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
Di-copper centre-containing domain
(47)
Superfamily
:
Di-copper centre-containing domain
(47)
Family
:
Tyrosinase
(22)
Protein domain
:
Tyrosinase
(22)
Streptomyces castaneoglobisporus [TaxId: 79261]
(22)
1a
d1wx2a_
A:
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Tyrosinase cofactor MelC1-like
(22)
Superfamily
:
Tyrosinase cofactor MelC1
(22)
Family
:
Tyrosinase cofactor MelC1
(22)
Protein domain
:
Tyrosinase cofactor MelC1
(22)
Streptomyces castaneoglobisporus [TaxId: 79261]
(22)
2a
d1wx2b_
B:
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CATH Domains
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Pfam Domains
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