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Asym. Unit
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Asym.Unit (615 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE D2 DOMAIN OF THE FIBROBLAST GROWTH FACTOR
Authors
:
K. W. Hung, T. K. S. Kumar, C. Yu
Date
:
28 Dec 04 (Deposition) - 28 Dec 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Fibroblast Growth Factor Receptor, Heparin, Tumor, Angiogenesis, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. W. Hung, T. K. S. Kumar, C. Yu
Solution Structure Of The D2 Domain Of The Fibroblast Growth Factor
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_017259 (A27F, chain A, )
2: VAR_017260 (M41T, chain A, )
3: VAR_036380 (R58C, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_017259
A
172
F
FGFR2_HUMAN
Disease (PS)
---
A
A
27
F
2
UniProt
VAR_017260
M
186
T
FGFR2_HUMAN
Polymorphism
755793
A
M
41
T
3
UniProt
VAR_036380
R
203
C
FGFR2_HUMAN
Unclassified
---
A
R
58
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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;
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End label:
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Exons
(3, 3)
Info
All Exons
Exon 1.6a (A:4-7)
Exon 1.7 (A:7-63)
Exon 1.8 (A:64-104)
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All Exon Boundaries
1: Boundary 1.5b/1.6a
2: Boundary 1.6a/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.15
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1h
ENST00000358487
1h
ENSE00001816393
chr10:
123357598-123357476
123
FGFR2_HUMAN
-
0
0
-
-
1.3a
ENST00000358487
3a
ENSE00002141262
chr10:
123353481-123353223
259
FGFR2_HUMAN
1-37
37
0
-
-
1.5b
ENST00000358487
5b
ENSE00001099029
chr10:
123325218-123324952
267
FGFR2_HUMAN
37-126
90
0
-
-
1.6a
ENST00000358487
6a
ENSE00001099020
chr10:
123324093-123324016
78
FGFR2_HUMAN
126-152
27
1
A:4-7
4
1.7
ENST00000358487
7
ENSE00001295614
chr10:
123310973-123310804
170
FGFR2_HUMAN
152-208
57
1
A:7-63
57
1.8
ENST00000358487
8
ENSE00000812216
chr10:
123298229-123298106
124
FGFR2_HUMAN
209-250
42
1
A:64-104
41
1.15
ENST00000358487
15
ENSE00001099035
chr10:
123279683-123279493
191
FGFR2_HUMAN
250-313
64
0
-
-
1.18b
ENST00000358487
18b
ENSE00001146218
chr10:
123276977-123276833
145
FGFR2_HUMAN
314-362
49
0
-
-
1.19c
ENST00000358487
19c
ENSE00001448727
chr10:
123274833-123274631
203
FGFR2_HUMAN
362-429
68
0
-
-
1.21
ENST00000358487
21
ENSE00001015834
chr10:
123263455-123263304
152
FGFR2_HUMAN
430-480
51
0
-
-
1.22
ENST00000358487
22
ENSE00001627890
chr10:
123260461-123260340
122
FGFR2_HUMAN
480-521
42
0
-
-
1.23
ENST00000358487
23
ENSE00001146272
chr10:
123258119-123258009
111
FGFR2_HUMAN
521-558
38
0
-
-
1.24
ENST00000358487
24
ENSE00001146264
chr10:
123256236-123256046
191
FGFR2_HUMAN
558-621
64
0
-
-
1.25
ENST00000358487
25
ENSE00001099037
chr10:
123247627-123247505
123
FGFR2_HUMAN
622-662
41
0
-
-
1.26
ENST00000358487
26
ENSE00001099030
chr10:
123246938-123246868
71
FGFR2_HUMAN
663-686
24
0
-
-
1.27
ENST00000358487
27
ENSE00001146235
chr10:
123245046-123244909
138
FGFR2_HUMAN
686-732
47
0
-
-
1.28b
ENST00000358487
28b
ENSE00002167762
chr10:
123243317-123243212
106
FGFR2_HUMAN
732-767
36
0
-
-
1.31h
ENST00000358487
31h
ENSE00001847306
chr10:
123239535-123237855
1681
FGFR2_HUMAN
768-821
54
0
-
-
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d1wvza_ (A:)
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Class
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All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
I set domains
(152)
Protein domain
:
automated matches
(23)
Human (Homo sapiens) [TaxId: 9606]
(22)
1a
d1wvza_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1wvzA01 (A:9-104)
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Class
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Mainly Beta
(13760)
Architecture
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Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Human (Homo sapiens)
(912)
1a
1wvzA01
A:9-104
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_I_set_1wvzA01 (A:16-103)
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Clan
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Ig
(577)
Family
:
I-set
(67)
Homo sapiens (Human)
(50)
1a
I-set-1wvzA01
A:16-103
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Chain A
Asymmetric Unit 1
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