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1WT6
Asym. Unit
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Asym.Unit (44 KB)
Biol.Unit 1 (39 KB)
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(1)
Title
:
COILED-COIL DOMAIN OF DMPK
Authors
:
P. Garcia, M. Marino, O. Mayans
Date
:
16 Nov 04 (Deposition) - 16 Nov 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B,D
Biol. Unit 1: A,B,D (1x)
Keywords
:
Coiled-Coil, Kinase Activation, Dmpk, Molecular Replacement, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Garcia, Z. Ucurum, R. Bucher, D. I. Svergun, T. Huber, A. Lustig, P. V. Konarev, M. Marino, O. Mayans
Molecular Insights Into The Self-Assembly Mechanism Of Dystrophia Myotonica Kinase
Faseb J. V. 20 1142 2006
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(2, 6)
Info
All Exons
Exon 1.11 (A:6-42 | B:2-42 | D:6-42)
Exon 1.12 (A:42-70 | B:42-68 | D:42-68)
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All Exon Boundaries
1: Boundary 1.10/1.11
2: Boundary 1.11/1.12
3: Boundary 1.12/1.13
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000291270
1a
ENSE00001112734
chr19:
46285815-46285451
365
DMPK_HUMAN
1-54
54
0
-
-
1.2c
ENST00000291270
2c
ENSE00001257024
chr19:
46283127-46283036
92
DMPK_HUMAN
54-84
31
0
-
-
1.3
ENST00000291270
3
ENSE00001598066
chr19:
46282780-46282697
84
DMPK_HUMAN
85-112
28
0
-
-
1.4
ENST00000291270
4
ENSE00001157031
chr19:
46282617-46282522
96
DMPK_HUMAN
113-144
32
0
-
-
1.5
ENST00000291270
5
ENSE00001112730
chr19:
46281899-46281751
149
DMPK_HUMAN
145-194
50
0
-
-
1.6
ENST00000291270
6
ENSE00001112733
chr19:
46281478-46281385
94
DMPK_HUMAN
194-225
32
0
-
-
1.7
ENST00000291270
7
ENSE00001112727
chr19:
46281131-46280925
207
DMPK_HUMAN
226-294
69
0
-
-
1.8b
ENST00000291270
8b
ENSE00001256892
chr19:
46280848-46280585
264
DMPK_HUMAN
295-382
88
0
-
-
1.9
ENST00000291270
9
ENSE00001112731
chr19:
46278292-46278207
86
DMPK_HUMAN
383-411
29
0
-
-
1.10
ENST00000291270
10
ENSE00001112739
chr19:
46276010-46275899
112
DMPK_HUMAN
411-448
38
0
-
-
1.11
ENST00000291270
11
ENSE00001256867
chr19:
46275186-46275029
158
DMPK_HUMAN
449-501
53
3
A:6-42
B:2-42
D:6-42
37
41
37
1.12
ENST00000291270
12
ENSE00001112726
chr19:
46274923-46274826
98
DMPK_HUMAN
501-534
34
3
A:42-70
B:42-68
D:42-68
29
27
27
1.13
ENST00000291270
13
ENSE00001112736
chr19:
46274654-46274608
47
DMPK_HUMAN
534-549
16
0
-
-
1.14b
ENST00000291270
14b
ENSE00001707544
chr19:
46274318-46274229
90
DMPK_HUMAN
550-579
30
0
-
-
1.15b
ENST00000291270
15b
ENSE00001655086
chr19:
46273898-46272978
921
DMPK_HUMAN
580-629
50
0
-
-
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SCOP Domains
(0, 0)
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1wt6B00 (B:2-68)
1b: CATH_1wt6A00 (A:6-70)
1c: CATH_1wt6D00 (D:6-68)
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Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Single alpha-helices involved in coiled-coils or other helix-helix interfaces
(552)
Homologous Superfamily
:
[code=1.20.5.340, no name defined]
(4)
Human (Homo sapiens)
(1)
1a
1wt6B00
B:2-68
1b
1wt6A00
A:6-70
1c
1wt6D00
D:6-68
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_DMPK_coil_1wt6D01 (D:21-68)
1b: PFAM_DMPK_coil_1wt6D02 (D:21-68)
1c: PFAM_DMPK_coil_1wt6D03 (D:21-68)
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Clan
:
no clan defined [family: DMPK_coil]
(1)
Family
:
DMPK_coil
(1)
Homo sapiens (Human)
(1)
1a
DMPK_coil-1wt6D01
D:21-68
1b
DMPK_coil-1wt6D02
D:21-68
1c
DMPK_coil-1wt6D03
D:21-68
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Asymmetric Unit 1
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Asym.Unit (44 KB)
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