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1WSP
Asym. Unit
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Asym.Unit (53 KB)
Biol.Unit 1 (48 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF AXIN DIX DOMAIN
Authors
:
N. Shibata, T. Hanamura, R. Yamamoto, Y. Ueda, H. Yamamoto, A. Kikuchi, Y. Higuchi
Date
:
08 Nov 04 (Deposition) - 14 Feb 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Shibata, T. Hanamura, R. Yamamoto, Y. Ueda, H. Yamamoto, A. Kikuchi, Y. Higuchi
Crystal Structure Of Axin Dix Domain
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: BENZOIC ACID (BEZa)
2a: MERCURY (II) ION (HGa)
2b: MERCURY (II) ION (HGb)
2c: MERCURY (II) ION (HGc)
2d: MERCURY (II) ION (HGd)
2e: MERCURY (II) ION (HGe)
2f: MERCURY (II) ION (HGf)
2g: MERCURY (II) ION (HGg)
2h: MERCURY (II) ION (HGh)
2i: MERCURY (II) ION (HGi)
View:
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No.
Name
Count
Type
Full Name
1
BEZ
1
Ligand/Ion
BENZOIC ACID
2
HG
9
Ligand/Ion
MERCURY (II) ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:184 , CYS A:750 , SER A:752
BINDING SITE FOR RESIDUE HG A 1094
2
AC2
SOFTWARE
BEZ A:501 , PHE A:759 , CYS A:760
BINDING SITE FOR RESIDUE HG A 1095
3
AC3
SOFTWARE
CYS A:803
BINDING SITE FOR RESIDUE HG A 1096
4
AC4
SOFTWARE
CYS B:750 , SER B:752
BINDING SITE FOR RESIDUE HG B 1194
5
AC5
SOFTWARE
PHE B:759 , CYS B:760 , TYR B:790
BINDING SITE FOR RESIDUE HG B 1195
6
AC6
SOFTWARE
PHE C:759 , CYS C:760 , TYR C:790
BINDING SITE FOR RESIDUE HG C 295
7
AC7
SOFTWARE
CYS C:750 , SER C:752
BINDING SITE FOR RESIDUE HG C 296
8
AC8
SOFTWARE
HOH A:48 , HOH A:126 , LYS A:786 , HG A:1095
BINDING SITE FOR RESIDUE BEZ A 501
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: DIX (A:750-832,B:750-832,C:750-832)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DIX
PS50841
DIX domain profile.
AXIN1_RAT
745-827
3
A:750-832
B:750-832
C:750-832
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1wspa1 (A:750-832)
1b: SCOP_d1wspb_ (B:)
1c: SCOP_d1wspc_ (C:)
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
Ubiquitin-like
(546)
Family
:
DIX domain
(2)
Protein domain
:
Axin 1
(2)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(2)
1a
d1wspa1
A:750-832
1b
d1wspb_
B:
1c
d1wspc_
C:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_DIX_1wspC01 (C:750-832)
1b: PFAM_DIX_1wspC02 (C:750-832)
1c: PFAM_DIX_1wspC03 (C:750-832)
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(
)
(
)
Clan
:
no clan defined [family: DIX]
(2)
Family
:
DIX
(2)
Rattus norvegicus (Rat)
(1)
1a
DIX-1wspC01
C:750-832
1b
DIX-1wspC02
C:750-832
1c
DIX-1wspC03
C:750-832
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Asym.Unit (53 KB)
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