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1WPB
Asym. Unit
Info
Asym.Unit (500 KB)
Biol.Unit 1 (732 KB)
Biol.Unit 2 (730 KB)
Biol.Unit 3 (126 KB)
Biol.Unit 4 (127 KB)
Biol.Unit 5 (127 KB)
Biol.Unit 6 (128 KB)
Biol.Unit 7 (126 KB)
Biol.Unit 8 (127 KB)
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(1)
Title
:
STRUCTURE OF ESCHERICHIA COLI YFBU GENE PRODUCT
Authors
:
D. Borek, Y. Chen, M. Zheng, T. Skarina, A. Savchenko, A. Edwards, Z. Otw Midwest Center For Structural Genomics (Mcsg)
Date
:
01 Sep 04 (Deposition) - 07 Dec 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B,C,D,E,F,G,H (3x)
Biol. Unit 2: I,J,K,L,M,N,O,P (3x)
Biol. Unit 3: B,C,F,G (1x)
Biol. Unit 4: J,K,N,O (1x)
Biol. Unit 5: I,L,M,P (1x)
Biol. Unit 6: A,D,E,H (1x)
Biol. Unit 7: B,C,F,G (1x)
Biol. Unit 8: J,K,N,O (1x)
Keywords
:
Structural Genomics, Mcsg, Ncs, Regulatory Protein, Protein Structure Initiative, Psi, Midwest Center For Structural Genomics, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Borek, Y. Chen, M. Zheng, T. Skarina, A. Savchenko, A. Edwards, Z. Otwinowski
Crystal Structure Of Escherichia Coli Yfbu Gene Product
To Be Published
[
close entry info
]
Hetero Components
(2, 80)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1aa: CHLORIDE ION (CLaa)
1ab: CHLORIDE ION (CLab)
1ac: CHLORIDE ION (CLac)
1ad: CHLORIDE ION (CLad)
1ae: CHLORIDE ION (CLae)
1af: CHLORIDE ION (CLaf)
1ag: CHLORIDE ION (CLag)
1ah: CHLORIDE ION (CLah)
1ai: CHLORIDE ION (CLai)
1aj: CHLORIDE ION (CLaj)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
1l: CHLORIDE ION (CLl)
1m: CHLORIDE ION (CLm)
1n: CHLORIDE ION (CLn)
1o: CHLORIDE ION (CLo)
1p: CHLORIDE ION (CLp)
1q: CHLORIDE ION (CLq)
1r: CHLORIDE ION (CLr)
1s: CHLORIDE ION (CLs)
1t: CHLORIDE ION (CLt)
1u: CHLORIDE ION (CLu)
1v: CHLORIDE ION (CLv)
1w: CHLORIDE ION (CLw)
1x: CHLORIDE ION (CLx)
1y: CHLORIDE ION (CLy)
1z: CHLORIDE ION (CLz)
2a: GLYCEROL (GOLa)
2aa: GLYCEROL (GOLaa)
2ab: GLYCEROL (GOLab)
2ac: GLYCEROL (GOLac)
2ad: GLYCEROL (GOLad)
2ae: GLYCEROL (GOLae)
2af: GLYCEROL (GOLaf)
2ag: GLYCEROL (GOLag)
2ah: GLYCEROL (GOLah)
2ai: GLYCEROL (GOLai)
2aj: GLYCEROL (GOLaj)
2ak: GLYCEROL (GOLak)
2al: GLYCEROL (GOLal)
2am: GLYCEROL (GOLam)
2an: GLYCEROL (GOLan)
2ao: GLYCEROL (GOLao)
2ap: GLYCEROL (GOLap)
2aq: GLYCEROL (GOLaq)
2ar: GLYCEROL (GOLar)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
2r: GLYCEROL (GOLr)
2s: GLYCEROL (GOLs)
2t: GLYCEROL (GOLt)
2u: GLYCEROL (GOLu)
2v: GLYCEROL (GOLv)
2w: GLYCEROL (GOLw)
2x: GLYCEROL (GOLx)
2y: GLYCEROL (GOLy)
2z: GLYCEROL (GOLz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
36
Ligand/Ion
CHLORIDE ION
2
GOL
44
Ligand/Ion
GLYCEROL
[
close Hetero Component info
]
Sites
(77, 77)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
69: HC6 (SOFTWARE)
70: HC7 (SOFTWARE)
71: HC8 (SOFTWARE)
72: HC9 (SOFTWARE)
73: IC1 (SOFTWARE)
74: IC2 (SOFTWARE)
75: IC3 (SOFTWARE)
76: IC4 (SOFTWARE)
77: IC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN I:20 , GLN L:20 , GLN M:20 , GLN P:20
BINDING SITE FOR RESIDUE CL I 2001
02
AC2
SOFTWARE
GLN J:20 , GLN K:20 , GLN N:20 , GLN O:20
BINDING SITE FOR RESIDUE CL J 2002
03
AC3
SOFTWARE
GLN J:13 , GLN K:13 , GLN N:13 , GLN O:13
BINDING SITE FOR RESIDUE CL K 2003
04
AC4
SOFTWARE
GLN B:20 , GLN C:20 , GLN F:20 , GLN G:20
BINDING SITE FOR RESIDUE CL C 2004
05
AC5
SOFTWARE
GLN A:20 , GLN D:20 , GLN E:20 , GLN H:20
BINDING SITE FOR RESIDUE CL H 2005
06
AC6
SOFTWARE
GLN B:13 , GLN C:13 , GLN F:13 , GLN G:13
BINDING SITE FOR RESIDUE CL C 2006
07
AC7
SOFTWARE
GLN I:13 , GLN L:13 , GLN M:13 , GLN P:13
BINDING SITE FOR RESIDUE CL I 2007
08
AC8
SOFTWARE
GLN A:13 , GLN D:13 , GLN E:13 , GLN H:13
BINDING SITE FOR RESIDUE CL D 2008
09
AC9
SOFTWARE
HIS L:76
BINDING SITE FOR RESIDUE CL L 2009
10
BC1
SOFTWARE
HIS B:76
BINDING SITE FOR RESIDUE CL B 2010
11
BC2
SOFTWARE
HIS D:76
BINDING SITE FOR RESIDUE CL D 2012
12
BC3
SOFTWARE
HIS H:76
BINDING SITE FOR RESIDUE CL H 2014
13
BC4
SOFTWARE
HIS I:76
BINDING SITE FOR RESIDUE CL I 2015
14
BC5
SOFTWARE
HIS J:76
BINDING SITE FOR RESIDUE CL J 2016
15
BC6
SOFTWARE
HIS M:76
BINDING SITE FOR RESIDUE CL M 2017
16
BC7
SOFTWARE
HIS O:76
BINDING SITE FOR RESIDUE CL O 2018
17
BC8
SOFTWARE
HIS P:76
BINDING SITE FOR RESIDUE CL P 2019
18
BC9
SOFTWARE
HIS A:79
BINDING SITE FOR RESIDUE CL A 2020
19
CC1
SOFTWARE
HIS C:79
BINDING SITE FOR RESIDUE CL C 2021
20
CC2
SOFTWARE
HIS D:79 , VAL D:80
BINDING SITE FOR RESIDUE CL D 2022
21
CC3
SOFTWARE
HIS F:79 , VAL F:80
BINDING SITE FOR RESIDUE CL F 2023
22
CC4
SOFTWARE
VAL H:80
BINDING SITE FOR RESIDUE CL H 2024
23
CC5
SOFTWARE
HIS I:79
BINDING SITE FOR RESIDUE CL I 2025
24
CC6
SOFTWARE
HIS J:79
BINDING SITE FOR RESIDUE CL J 2026
25
CC7
SOFTWARE
HIS K:79 , VAL K:80
BINDING SITE FOR RESIDUE CL K 2027
26
CC8
SOFTWARE
HIS L:79 , VAL L:80
BINDING SITE FOR RESIDUE CL L 2028
27
CC9
SOFTWARE
HIS M:79
BINDING SITE FOR RESIDUE CL M 2029
28
DC1
SOFTWARE
HIS N:79
BINDING SITE FOR RESIDUE CL N 2030
29
DC2
SOFTWARE
SER C:160 , ASN C:162
BINDING SITE FOR RESIDUE CL C 2031
30
DC3
SOFTWARE
HIS E:79
BINDING SITE FOR RESIDUE CL E 2032
31
DC4
SOFTWARE
HIS G:79
BINDING SITE FOR RESIDUE CL G 2033
32
DC5
SOFTWARE
HIS F:76
BINDING SITE FOR RESIDUE CL F 2034
33
DC6
SOFTWARE
GLU F:59 , LYS F:61 , THR F:64 , ARG F:108
BINDING SITE FOR RESIDUE CL F 2035
34
DC7
SOFTWARE
GLU B:120 , GLN G:49 , GLU G:52 , HIS G:151 , GLN G:156 , HOH G:3091
BINDING SITE FOR RESIDUE GOL G 3001
35
DC8
SOFTWARE
ARG C:37 , GLN C:49 , GLU C:52 , HIS E:151 , GLN E:156 , HOH E:3047 , MET F:116 , GLU F:120
BINDING SITE FOR RESIDUE GOL E 3002
36
DC9
SOFTWARE
ARG B:37 , GLN B:49 , GLU B:52 , HOH B:3104 , GLU C:120 , HIS D:151 , GLN D:156
BINDING SITE FOR RESIDUE GOL B 3003
37
EC1
SOFTWARE
HIS A:151 , GLN A:156 , HOH A:3082 , ARG E:37 , GLN E:49 , GLU E:52 , GLU H:120
BINDING SITE FOR RESIDUE GOL E 3004
38
EC2
SOFTWARE
ARG D:37 , GLN D:49 , GLU D:52 , MET E:116 , GLU E:120 , HIS F:151 , GLN F:156 , HOH F:3085
BINDING SITE FOR RESIDUE GOL D 3005
39
EC3
SOFTWARE
MET A:116 , GLU A:120 , ARG H:37 , GLN H:49 , GLU H:52 , HIS H:151 , GLN H:156 , HOH H:3035
BINDING SITE FOR RESIDUE GOL H 3006
40
EC4
SOFTWARE
HIS I:151 , GLN I:156 , ARG M:37 , GLN M:49 , GLU M:52 , MET P:116 , GLU P:120
BINDING SITE FOR RESIDUE GOL M 3007
41
EC5
SOFTWARE
HIS J:151 , GLN J:156 , ARG N:37 , GLN N:49 , GLU N:52 , HOH N:3128 , MET O:116 , GLU O:120
BINDING SITE FOR RESIDUE GOL N 3008
42
EC6
SOFTWARE
GLN I:49 , GLU I:52 , HIS K:151 , GLN K:156 , HOH K:3113 , HOH K:3121 , GLU L:120
BINDING SITE FOR RESIDUE GOL K 3009
43
EC7
SOFTWARE
GLU J:52 , ARG K:66 , HOH K:3117 , THR L:67 , ASP L:70 , LEU L:147 , HIS L:151 , HOH L:3036
BINDING SITE FOR RESIDUE GOL K 3010
44
EC8
SOFTWARE
ARG K:37 , GLN K:49 , GLU K:52 , HOH K:3065 , HIS M:151 , GLN M:156 , MET N:116 , GLU N:120
BINDING SITE FOR RESIDUE GOL K 3011
45
EC9
SOFTWARE
GLN L:49 , GLU L:52 , GLU M:120 , HIS N:151 , GLN N:156
BINDING SITE FOR RESIDUE GOL N 3012
46
FC1
SOFTWARE
MET J:116 , GLU J:120 , GLN O:49 , GLU O:52 , ASP O:70 , HIS O:151 , GLN O:156 , HOH O:3066
BINDING SITE FOR RESIDUE GOL O 3013
47
FC2
SOFTWARE
GLU I:120 , ARG P:37 , GLN P:49 , GLU P:52 , HIS P:151 , GLN P:156 , HOH P:3094
BINDING SITE FOR RESIDUE GOL P 3014
48
FC3
SOFTWARE
HIS B:151 , GLN B:156 , ARG F:37 , GLN F:49 , GLU F:52 , MET G:116 , GLU G:120
BINDING SITE FOR RESIDUE GOL B 3015
49
FC4
SOFTWARE
ARG A:66 , ARG H:51 , THR H:67 , ASP H:70 , HIS H:151 , HOH H:3091 , HOH H:3095
BINDING SITE FOR RESIDUE GOL H 3016
50
FC5
SOFTWARE
ARG B:66 , HOH B:3109 , ARG G:66 , THR G:67 , ASP G:70 , HOH G:3070 , HOH G:3101 , HOH G:3126
BINDING SITE FOR RESIDUE GOL B 3017
51
FC6
SOFTWARE
ARG D:122 , TYR D:123 , THR D:124 , HIS D:125 , HOH D:3128
BINDING SITE FOR RESIDUE GOL D 3018
52
FC7
SOFTWARE
ARG C:66 , THR C:67 , ASP C:70 , HOH C:3064 , ARG D:66 , HOH D:3129
BINDING SITE FOR RESIDUE GOL D 3019
53
FC8
SOFTWARE
HIS C:76 , ARG C:122 , TYR C:123 , HOH C:3098 , HOH C:3135 , HIS D:76 , HOH D:3075 , HOH D:3104
BINDING SITE FOR RESIDUE GOL D 3020
54
FC9
SOFTWARE
ARG B:55 , ARG C:66 , HOH C:3113 , HOH C:3120 , THR D:67 , ASP D:70
BINDING SITE FOR RESIDUE GOL C 3021
55
GC1
SOFTWARE
GLY E:121 , ARG E:122 , TYR E:123 , THR E:124 , HOH E:3064 , HOH E:3122 , TYR F:157 , HIS F:158
BINDING SITE FOR RESIDUE GOL E 3022
56
GC2
SOFTWARE
GLY B:121 , ARG B:122 , TYR B:123 , THR B:124 , HOH B:3118 , HIS G:76 , HOH G:3086
BINDING SITE FOR RESIDUE GOL B 3023
57
GC3
SOFTWARE
THR B:67 , ASP B:70 , LEU B:147 , HOH B:3093 , HOH B:3113 , ARG G:66
BINDING SITE FOR RESIDUE GOL B 3024
58
GC4
SOFTWARE
THR A:67 , ASP A:70 , HOH A:3119 , HOH E:3078 , ARG H:66 , HOH H:3041
BINDING SITE FOR RESIDUE GOL H 3025
59
GC5
SOFTWARE
ARG J:66 , GLU O:52 , ASP O:70 , HIS O:151 , HOH O:3042
BINDING SITE FOR RESIDUE GOL O 3026
60
GC6
SOFTWARE
HIS K:76 , HOH K:3079 , ARG L:122 , TYR L:123 , HOH L:3046 , HOH L:3076
BINDING SITE FOR RESIDUE GOL L 3027
61
GC7
SOFTWARE
HOH I:3088 , THR K:67 , ASP K:70 , HOH K:3067 , ARG L:66 , HOH L:3105
BINDING SITE FOR RESIDUE GOL L 3028
62
GC8
SOFTWARE
ARG M:66 , THR N:67 , ASP N:70 , HIS N:151
BINDING SITE FOR RESIDUE GOL N 3029
63
GC9
SOFTWARE
ARG J:122 , TYR J:123 , THR J:124 , HIS J:125 , HOH J:3110 , HOH J:3150 , HIS O:76
BINDING SITE FOR RESIDUE GOL J 3030
64
HC1
SOFTWARE
ARG I:122 , TYR I:123 , HOH I:3136 , HOH I:3159 , HIS P:76
BINDING SITE FOR RESIDUE GOL I 3031
65
HC2
SOFTWARE
THR I:67 , ASP I:70 , HIS I:151 , HOH I:3100 , ARG M:51 , GLU M:52 , ARG P:66
BINDING SITE FOR RESIDUE GOL I 3032
66
HC3
SOFTWARE
HIS J:76 , HOH J:3088 , HOH J:3148 , ARG O:122 , TYR O:123 , HOH O:3028
BINDING SITE FOR RESIDUE GOL J 3033
67
HC4
SOFTWARE
GLU I:73 , HIS I:76 , TYR I:157 , ARG P:122 , TYR P:123 , HOH P:3076
BINDING SITE FOR RESIDUE GOL P 3034
68
HC5
SOFTWARE
ARG D:51 , GLU D:52 , ARG E:66 , THR F:67 , ASP F:70 , HIS F:151
BINDING SITE FOR RESIDUE GOL E 3035
69
HC6
SOFTWARE
LEU A:48 , GLN A:49 , GLU A:52 , ASP C:70 , HIS C:151 , GLN C:156 , HOH C:3053 , GLU D:120
BINDING SITE FOR RESIDUE GOL C 3036
70
HC7
SOFTWARE
GLU A:73 , HIS A:76 , TYR A:157 , ARG H:122 , TYR H:123 , HOH H:3066
BINDING SITE FOR RESIDUE GOL A 3037
71
HC8
SOFTWARE
HIS B:76 , ARG G:122 , TYR G:123 , HOH G:3078 , HOH G:3122
BINDING SITE FOR RESIDUE GOL G 3038
72
HC9
SOFTWARE
GLU E:73 , HIS E:76 , TYR E:157 , ARG F:122 , TYR F:123 , HOH F:3048 , HOH F:3088
BINDING SITE FOR RESIDUE GOL F 3039
73
IC1
SOFTWARE
ARG A:122 , TYR A:123 , HOH A:3058 , HOH A:3073 , HOH A:3090 , GLU H:73 , HIS H:76 , TYR H:157
BINDING SITE FOR RESIDUE GOL A 3040
74
IC2
SOFTWARE
ARG K:122 , TYR K:123 , THR K:124 , HIS K:125 , HOH K:3082 , HOH K:3142 , HOH K:3145 , HIS L:76
BINDING SITE FOR RESIDUE GOL K 3041
75
IC3
SOFTWARE
GLU M:73 , HIS M:76 , TYR M:157 , HOH M:3135 , ARG N:122 , TYR N:123 , HOH N:3086 , HOH N:3097
BINDING SITE FOR RESIDUE GOL M 3042
76
IC4
SOFTWARE
GLY M:121 , ARG M:122 , TYR M:123 , THR M:124 , HOH M:3128 , GLU N:73 , HIS N:76 , HOH N:3085
BINDING SITE FOR RESIDUE GOL M 3043
77
IC5
SOFTWARE
ARG K:51 , HOH K:3154 , THR M:67 , ASP M:70 , LEU M:147 , ARG N:66
BINDING SITE FOR RESIDUE GOL N 3044
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 16)
Info
All SCOP Domains
1a: SCOP_d1wpba_ (A:)
1b: SCOP_d1wpbb_ (B:)
1c: SCOP_d1wpbk_ (K:)
1d: SCOP_d1wpbl_ (L:)
1e: SCOP_d1wpbm_ (M:)
1f: SCOP_d1wpbn_ (N:)
1g: SCOP_d1wpbo_ (O:)
1h: SCOP_d1wpbp_ (P:)
1i: SCOP_d1wpbc_ (C:)
1j: SCOP_d1wpbd_ (D:)
1k: SCOP_d1wpbe_ (E:)
1l: SCOP_d1wpbf_ (F:)
1m: SCOP_d1wpbg_ (G:)
1n: SCOP_d1wpbh_ (H:)
1o: SCOP_d1wpbi_ (I:)
1p: SCOP_d1wpbj_ (J:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
YfbU-like
(1)
Superfamily
:
YfbU-like
(1)
Family
:
YfbU-like
(1)
Protein domain
:
Hypothetical protein YfbU
(1)
Escherichia coli [TaxId: 562]
(1)
1a
d1wpba_
A:
1b
d1wpbb_
B:
1c
d1wpbk_
K:
1d
d1wpbl_
L:
1e
d1wpbm_
M:
1f
d1wpbn_
N:
1g
d1wpbo_
O:
1h
d1wpbp_
P:
1i
d1wpbc_
C:
1j
d1wpbd_
D:
1k
d1wpbe_
E:
1l
d1wpbf_
F:
1m
d1wpbg_
G:
1n
d1wpbh_
H:
1o
d1wpbi_
I:
1p
d1wpbj_
J:
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close SCOP info
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CATH Domains
(2, 32)
Info
all CATH domains
1a: CATH_1wpbM01 (M:4-58)
1b: CATH_1wpbO01 (O:3-57)
1c: CATH_1wpbL01 (L:3-58)
1d: CATH_1wpbN01 (N:3-58)
1e: CATH_1wpbP01 (P:3-58)
1f: CATH_1wpbA01 (A:3-60)
1g: CATH_1wpbD01 (D:3-48)
1h: CATH_1wpbI01 (I:3-48)
1i: CATH_1wpbG01 (G:3-56)
1j: CATH_1wpbB01 (B:3-58)
1k: CATH_1wpbC01 (C:3-58)
1l: CATH_1wpbE01 (E:3-58)
1m: CATH_1wpbF01 (F:3-58)
1n: CATH_1wpbH01 (H:3-58)
1o: CATH_1wpbJ01 (J:3-58)
1p: CATH_1wpbK01 (K:3-58)
2a: CATH_1wpbO02 (O:58-170)
2b: CATH_1wpbG02 (G:57-170)
2c: CATH_1wpbM02 (M:59-170)
2d: CATH_1wpbN02 (N:59-170)
2e: CATH_1wpbP02 (P:59-170)
2f: CATH_1wpbA02 (A:61-170)
2g: CATH_1wpbD02 (D:49-170)
2h: CATH_1wpbI02 (I:49-170)
2i: CATH_1wpbB02 (B:59-170)
2j: CATH_1wpbC02 (C:59-170)
2k: CATH_1wpbE02 (E:59-170)
2l: CATH_1wpbF02 (F:59-170)
2m: CATH_1wpbH02 (H:59-170)
2n: CATH_1wpbJ02 (J:59-170)
2o: CATH_1wpbK02 (K:59-170)
2p: CATH_1wpbL02 (L:59-170)
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Homologous Superfamilies
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Organisms
(
)
(
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
Helix hairpin bin
(1)
Escherichia coli. Organism_taxid: 562.
(1)
1a
1wpbM01
M:4-58
1b
1wpbO01
O:3-57
1c
1wpbL01
L:3-58
1d
1wpbN01
N:3-58
1e
1wpbP01
P:3-58
1f
1wpbA01
A:3-60
1g
1wpbD01
D:3-48
1h
1wpbI01
I:3-48
1i
1wpbG01
G:3-56
1j
1wpbB01
B:3-58
1k
1wpbC01
C:3-58
1l
1wpbE01
E:3-58
1m
1wpbF01
F:3-58
1n
1wpbH01
H:3-58
1o
1wpbJ01
J:3-58
1p
1wpbK01
K:3-58
Topology
:
yfbu gene product, domain 2
(1)
Homologous Superfamily
:
yfbu gene product, domain 2
(1)
Escherichia coli. Organism_taxid: 562.
(1)
2a
1wpbO02
O:58-170
2b
1wpbG02
G:57-170
2c
1wpbM02
M:59-170
2d
1wpbN02
N:59-170
2e
1wpbP02
P:59-170
2f
1wpbA02
A:61-170
2g
1wpbD02
D:49-170
2h
1wpbI02
I:49-170
2i
1wpbB02
B:59-170
2j
1wpbC02
C:59-170
2k
1wpbE02
E:59-170
2l
1wpbF02
F:59-170
2m
1wpbH02
H:59-170
2n
1wpbJ02
J:59-170
2o
1wpbK02
K:59-170
2p
1wpbL02
L:59-170
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Pfam Domains
(1, 16)
Info
all PFAM domains
1a: PFAM_YfbU_1wpbP01 (P:7-170)
1b: PFAM_YfbU_1wpbP02 (P:7-170)
1c: PFAM_YfbU_1wpbP03 (P:7-170)
1d: PFAM_YfbU_1wpbP04 (P:7-170)
1e: PFAM_YfbU_1wpbP05 (P:7-170)
1f: PFAM_YfbU_1wpbP06 (P:7-170)
1g: PFAM_YfbU_1wpbP07 (P:7-170)
1h: PFAM_YfbU_1wpbP08 (P:7-170)
1i: PFAM_YfbU_1wpbP09 (P:7-170)
1j: PFAM_YfbU_1wpbP10 (P:7-170)
1k: PFAM_YfbU_1wpbP11 (P:7-170)
1l: PFAM_YfbU_1wpbP12 (P:7-170)
1m: PFAM_YfbU_1wpbP13 (P:7-170)
1n: PFAM_YfbU_1wpbP14 (P:7-170)
1o: PFAM_YfbU_1wpbP15 (P:7-170)
1p: PFAM_YfbU_1wpbP16 (P:7-170)
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Clan
:
no clan defined [family: YfbU]
(1)
Family
:
YfbU
(1)
Escherichia coli (strain UTI89 / UPEC)
(1)
1a
YfbU-1wpbP01
P:7-170
1b
YfbU-1wpbP02
P:7-170
1c
YfbU-1wpbP03
P:7-170
1d
YfbU-1wpbP04
P:7-170
1e
YfbU-1wpbP05
P:7-170
1f
YfbU-1wpbP06
P:7-170
1g
YfbU-1wpbP07
P:7-170
1h
YfbU-1wpbP08
P:7-170
1i
YfbU-1wpbP09
P:7-170
1j
YfbU-1wpbP10
P:7-170
1k
YfbU-1wpbP11
P:7-170
1l
YfbU-1wpbP12
P:7-170
1m
YfbU-1wpbP13
P:7-170
1n
YfbU-1wpbP14
P:7-170
1o
YfbU-1wpbP15
P:7-170
1p
YfbU-1wpbP16
P:7-170
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