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1WP0
Biol. Unit 2
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Asym.Unit (84 KB)
Biol.Unit 1 (28 KB)
Biol.Unit 2 (28 KB)
Biol.Unit 3 (28 KB)
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(1)
Title
:
HUMAN SCO1
Authors
:
J. C. Williams, C. Sue, G. S. Banting, H. Yang, D. M. Glerum, W. A. Hendrickson, E. A. Schon
Date
:
27 Aug 04 (Deposition) - 18 Jan 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Cu-Binding Protein, Mitochondrial Assembly Factor, Redox, Chaperone
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. C. Williams, C. Sue, G. S. Banting, H. Yang, D. M. Glerum, W. A. Hendrickson, E. A. Schon
Crystal Structure Of Human Sco1: Implications For Redox Signaling By A Mitochondrial Cytochrome C Oxidase "Assembly" Protein
J. Biol. Chem. V. 280 15202 2005
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
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No.
Name
Count
Type
Full Name
1
MSE
4
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_012109 (P174L, chain B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_012109
P
174
L
SCO1_HUMAN
Disease (MT-C4D)
---
B
P
174
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 3)
Info
All SCOP Domains
1a: SCOP_d1wp0b_ (B:)
1b: SCOP_d1wp0c_ (C:)
2a: SCOP_d1wp0a1 (A:138-297)
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Protein Domains
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione peroxidase-like
(136)
Protein domain
:
automated matches
(46)
Human (Homo sapiens) [TaxId: 9606]
(16)
1a
d1wp0b_
B:
1b
d1wp0c_
C:
Protein domain
:
Thioredoxin-like protein Sco1 (YpmQ), soluble domain
(6)
Human (Homo sapiens) [TaxId: 9606]
(2)
2a
d1wp0a1
A:138-297
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1wp0A00 (A:138-297)
1b: CATH_1wp0B00 (B:138-297)
1c: CATH_1wp0C00 (C:138-297)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Human (Homo sapiens)
(186)
1a
1wp0A00
A:138-297
1b
1wp0B00
B:138-297
1c
1wp0C00
C:138-297
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_SCO1_SenC_1wp0C01 (C:139-282)
1b: PFAM_SCO1_SenC_1wp0C02 (C:139-282)
1c: PFAM_SCO1_SenC_1wp0C03 (C:139-282)
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Clan
:
Thioredoxin
(367)
Family
:
SCO1-SenC
(7)
Homo sapiens (Human)
(2)
1a
SCO1-SenC-1wp0C01
C:139-282
1b
SCO1-SenC-1wp0C02
C:139-282
1c
SCO1-SenC-1wp0C03
C:139-282
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Show PDB file:
Asym.Unit (84 KB)
Header - Asym.Unit
Biol.Unit 1 (28 KB)
Header - Biol.Unit 1
Biol.Unit 2 (28 KB)
Header - Biol.Unit 2
Biol.Unit 3 (28 KB)
Header - Biol.Unit 3
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