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Asym. Unit
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Asym.Unit (637 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE UBX DOMAIN OF KIAA0794 PROTEIN
Authors
:
H. Zhang, F. Hayashi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 May 04 (Deposition) - 28 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Ubx Domain, Beta-Grasp Fold, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Zhang, F. Hayashi, S. Yokoyama
Solution Structure Of The Ubx Domain Of Kiaa0794 Protein
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: UBX (A:39-116)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
UBX
PS50033
UBX domain profile.
UBXN7_HUMAN
408-485
1
A:39-116
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Exons
(3, 3)
Info
All Exons
Exon 1.12 (A:1-41 (gaps))
Exon 1.13 (A:41-67)
Exon 1.14c (A:68-120)
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All Exon Boundaries
1: Boundary 1.11/1.12
2: Boundary 1.12/1.13
3: Boundary 1.13/1.14c
4: Boundary 1.14c/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000296328
1a
ENSE00001290985
chr3:
196159345-196159198
148
UBXN7_HUMAN
1-25
25
0
-
-
1.4
ENST00000296328
4
ENSE00001670290
chr3:
196134264-196134117
148
UBXN7_HUMAN
25-74
50
0
-
-
1.5
ENST00000296328
5
ENSE00001595418
chr3:
196129890-196129823
68
UBXN7_HUMAN
74-97
24
0
-
-
1.7b
ENST00000296328
7b
ENSE00001741987
chr3:
196120490-196120425
66
UBXN7_HUMAN
97-119
23
0
-
-
1.8b
ENST00000296328
8b
ENSE00001774298
chr3:
196118796-196118684
113
UBXN7_HUMAN
119-156
38
0
-
-
1.9
ENST00000296328
9
ENSE00001677336
chr3:
196098913-196098767
147
UBXN7_HUMAN
157-205
49
0
-
-
1.10
ENST00000296328
10
ENSE00001606845
chr3:
196096382-196096292
91
UBXN7_HUMAN
206-236
31
0
-
-
1.11
ENST00000296328
11
ENSE00001750602
chr3:
196095026-196094899
128
UBXN7_HUMAN
236-278
43
0
-
-
1.12
ENST00000296328
12
ENSE00001611820
chr3:
196089558-196089165
394
UBXN7_HUMAN
279-410
132
1
A:1-41 (gaps)
86
1.13
ENST00000296328
13
ENSE00001718795
chr3:
196088794-196088715
80
UBXN7_HUMAN
410-436
27
1
A:41-67
27
1.14c
ENST00000296328
14c
ENSE00001265446
chr3:
196083717-196074533
9185
UBXN7_HUMAN
437-489
53
1
A:68-120
53
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1wj4a_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
Ubiquitin-like
(546)
Family
:
UBX domain
(13)
Protein domain
:
Hypothetical protein KIAA0794
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1wj4a_
A:
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CATH Domains
(0, 0)
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_UBX_1wj4A01 (A:38-118)
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Clan
:
Ubiquitin
(279)
Family
:
UBX
(7)
Homo sapiens (Human)
(5)
1a
UBX-1wj4A01
A:38-118
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Asymmetric Unit 1
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