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1WIS
Asym. Unit
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Asym.Unit (620 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE FIFTH FNIII DOMAIN FROM HUMAN KIAA1514 PROTEIN
Authors
:
T. Suetake, F. Hayashi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 May 04 (Deposition) - 19 Jul 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Fniii Domain, Kiaa1514, Sidekick-2, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Suetake, F. Hayashi, S. Yokoyama
Solution Structure Of The Fifth Fniii Domain From Human Kiaa1514 Protein
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: FN3 (-|-|-|-|A:20-118|A:119-120|A:124-1...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FN3
PS50853
Fibronectin type-III domain profile.
SDK2_HUMAN
592-688
693-789
794-893
897-991
995-1094
1099-1197
1202-1299
1303-1397
1402-1499
1504-1621
1626-1722
1726-1821
1824-1923
3
-
-
-
-
A:20-118
A:119-120
A:124-124
-
-
-
-
-
-
[
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Exons
(6, 6)
Info
All Exons
Exon 1.21 (A:1-16 (gaps))
Exon 1.22 (A:16-56)
Exon 1.23 (A:57-93)
Exon 1.24 (A:93-118)
Exon 1.25 (A:119-120)
Exon 1.26 (A:121-124)
View:
Select:
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All Exon Boundaries
1: Boundary 1.20/1.21
2: Boundary 1.21/1.22
3: Boundary 1.22/1.23
4: Boundary 1.23/1.24
5: Boundary 1.24/1.25
6: Boundary 1.25/1.26
7: Boundary 1.26/1.27
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000392650
1
ENSE00001774196
chr17:
71640227-71640164
64
SDK2_HUMAN
1-22
22
0
-
-
1.2
ENST00000392650
2
ENSE00001512684
chr17:
71503736-71503577
160
SDK2_HUMAN
22-75
54
0
-
-
1.3a
ENST00000392650
3a
ENSE00001512681
chr17:
71468357-71468251
107
SDK2_HUMAN
75-111
37
0
-
-
1.4
ENST00000392650
4
ENSE00001512678
chr17:
71452192-71452045
148
SDK2_HUMAN
111-160
50
0
-
-
1.5
ENST00000392650
5
ENSE00001512676
chr17:
71443887-71443754
134
SDK2_HUMAN
160-205
46
0
-
-
1.6
ENST00000392650
6
ENSE00001512673
chr17:
71437062-71436951
112
SDK2_HUMAN
205-242
38
0
-
-
1.7
ENST00000392650
7
ENSE00001421277
chr17:
71434293-71434103
191
SDK2_HUMAN
242-306
65
0
-
-
1.8a
ENST00000392650
8a
ENSE00001197707
chr17:
71433961-71433878
84
SDK2_HUMAN
306-334
29
0
-
-
1.9a
ENST00000392650
9a
ENSE00001325802
chr17:
71431783-71431589
195
SDK2_HUMAN
334-399
66
0
-
-
1.10
ENST00000392650
10
ENSE00001290139
chr17:
71429987-71429871
117
SDK2_HUMAN
399-438
40
0
-
-
1.11
ENST00000392650
11
ENSE00001310856
chr17:
71427808-71427641
168
SDK2_HUMAN
438-494
57
0
-
-
1.12
ENST00000392650
12
ENSE00001290905
chr17:
71426752-71426650
103
SDK2_HUMAN
494-528
35
0
-
-
1.13
ENST00000392650
13
ENSE00002158681
chr17:
71420231-71420055
177
SDK2_HUMAN
528-587
60
0
-
-
1.14
ENST00000392650
14
ENSE00001197681
chr17:
71419661-71419525
137
SDK2_HUMAN
587-633
47
0
-
-
1.15
ENST00000392650
15
ENSE00001326785
chr17:
71418573-71418426
148
SDK2_HUMAN
633-682
50
0
-
-
1.16
ENST00000392650
16
ENSE00001293900
chr17:
71415445-71415305
141
SDK2_HUMAN
682-729
48
0
-
-
1.17
ENST00000392650
17
ENSE00001327938
chr17:
71412131-71411950
182
SDK2_HUMAN
729-790
62
0
-
-
1.18a
ENST00000392650
18a
ENSE00001136771
chr17:
71410898-71410783
116
SDK2_HUMAN
790-828
39
0
-
-
1.19
ENST00000392650
19
ENSE00001340213
chr17:
71398280-71398085
196
SDK2_HUMAN
829-894
66
0
-
-
1.20
ENST00000392650
20
ENSE00001293294
chr17:
71397891-71397793
99
SDK2_HUMAN
894-927
34
0
-
-
1.21
ENST00000392650
21
ENSE00001330735
chr17:
71397350-71397159
192
SDK2_HUMAN
927-991
65
1
A:1-16 (gaps)
20
1.22
ENST00000392650
22
ENSE00001797223
chr17:
71395428-71395307
122
SDK2_HUMAN
991-1031
41
1
A:16-56
41
1.23
ENST00000392650
23
ENSE00001197653
chr17:
71394568-71394459
110
SDK2_HUMAN
1032-1068
37
1
A:57-93
37
1.24
ENST00000392650
24
ENSE00001328834
chr17:
71394324-71394174
151
SDK2_HUMAN
1068-1118
51
1
A:93-118
26
1.25
ENST00000392650
25
ENSE00001256056
chr17:
71391531-71391294
238
SDK2_HUMAN
1119-1198
80
1
A:119-120
2
1.26
ENST00000392650
26
ENSE00001256048
chr17:
71390463-71390348
116
SDK2_HUMAN
1198-1236
39
1
A:121-124
4
1.27
ENST00000392650
27
ENSE00001256039
chr17:
71389888-71389699
190
SDK2_HUMAN
1237-1300
64
0
-
-
1.28
ENST00000392650
28
ENSE00001256030
chr17:
71387677-71387579
99
SDK2_HUMAN
1300-1333
34
0
-
-
1.29
ENST00000392650
29
ENSE00001256022
chr17:
71386620-71386426
195
SDK2_HUMAN
1333-1398
66
0
-
-
1.30
ENST00000392650
30
ENSE00001256013
chr17:
71384176-71383975
202
SDK2_HUMAN
1398-1465
68
0
-
-
1.31
ENST00000392650
31
ENSE00001256005
chr17:
71382687-71382584
104
SDK2_HUMAN
1465-1500
36
0
-
-
1.32
ENST00000392650
32
ENSE00001255997
chr17:
71382056-71381986
71
SDK2_HUMAN
1500-1523
24
0
-
-
1.33
ENST00000392650
33
ENSE00001256344
chr17:
71380150-71380015
136
SDK2_HUMAN
1524-1569
46
0
-
-
1.34
ENST00000392650
34
ENSE00001255983
chr17:
71377089-71377033
57
SDK2_HUMAN
1569-1588
20
0
-
-
1.35
ENST00000392650
35
ENSE00001256243
chr17:
71375688-71375587
102
SDK2_HUMAN
1588-1622
35
0
-
-
1.36
ENST00000392650
36
ENSE00001256238
chr17:
71375431-71375316
116
SDK2_HUMAN
1622-1660
39
0
-
-
1.38
ENST00000392650
38
ENSE00001256232
chr17:
71364732-71364546
187
SDK2_HUMAN
1661-1723
63
0
-
-
1.39
ENST00000392650
39
ENSE00000947064
chr17:
71361534-71361397
138
SDK2_HUMAN
1723-1769
47
0
-
-
1.40
ENST00000392650
40
ENSE00000947066
chr17:
71357984-71357823
162
SDK2_HUMAN
1769-1823
55
0
-
-
1.41a
ENST00000392650
41a
ENSE00001300100
chr17:
71354343-71354218
126
SDK2_HUMAN
1823-1865
43
0
-
-
1.42a
ENST00000392650
42a
ENSE00000947069
chr17:
71348776-71348612
165
SDK2_HUMAN
1865-1920
56
0
-
-
1.43a
ENST00000392650
43a
ENSE00000947071
chr17:
71346929-71346789
141
SDK2_HUMAN
1920-1967
48
0
-
-
1.44
ENST00000392650
44
ENSE00000947072
chr17:
71346514-71346376
139
SDK2_HUMAN
1967-2013
47
0
-
-
1.45
ENST00000392650
45
ENSE00000947074
chr17:
71344864-71344738
127
SDK2_HUMAN
2013-2055
43
0
-
-
1.46e
ENST00000392650
46e
ENSE00001421304
chr17:
71335079-71330524
4556
SDK2_HUMAN
2056-2172
117
0
-
-
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1wisa1 (A:8-118)
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Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Fibronectin type III
(212)
Family
:
Fibronectin type III
(180)
Protein domain
:
Sidekick 2
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1wisa1
A:8-118
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_fn3_1wisA01 (A:19-108)
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Clan
:
E-set
(290)
Family
:
fn3
(66)
Homo sapiens (Human)
(52)
1a
fn3-1wisA01
A:19-108
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