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1WHR
Asym. Unit
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Asym.Unit (667 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE R3H DOMAIN FROM HUMAN HYPOTHETICAL PROTEIN BAA76846
Authors
:
T. Nagata, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 May 04 (Deposition) - 28 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
R3H Domain, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Nagata, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama
Solution Structure Of The R3H Domain From Human Hypothetical Protein Baa76846
To Be Published
(for further references see the
PDB file header
)
[
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: R3H (A:155-218)
2: SUZ (A:219-248)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
R3H
PS51061
R3H domain profile.
R3HD2_HUMAN
169-232
1
A:155-218
2
SUZ
PS51673
SUZ domain profile.
R3HD2_HUMAN
233-310
1
A:219-248
[
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Exons
(6, 6)
Info
All Exons
Exon 1.7 (A:126-129)
Exon 1.8 (A:129-153 (gaps))
Exon 1.9 (A:153-173)
Exon 1.10b (A:173-220)
Exon 1.11a (A:220-244)
Exon 1.14 (A:246-249)
View:
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All Exon Boundaries
1: Boundary 1.6/1.7
2: Boundary 1.7/1.8
3: Boundary 1.8/1.9
4: Boundary 1.9/1.10b
5: Boundary 1.10b/1.11a
6: Boundary 1.11a/1.13
7: Boundary 1.13/1.14
8: Boundary 1.14/1.15
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.4b
ENST00000358907
4b
ENSE00001600262
chr12:
57704246-57704047
200
R3HD2_HUMAN
1-55
55
0
-
-
1.5
ENST00000358907
5
ENSE00001746140
chr12:
57697000-57696959
42
R3HD2_HUMAN
56-69
14
0
-
-
1.6
ENST00000358907
6
ENSE00001704164
chr12:
57693964-57693878
87
R3HD2_HUMAN
70-98
29
0
-
-
1.7
ENST00000358907
7
ENSE00001705968
chr12:
57693261-57693135
127
R3HD2_HUMAN
99-141
43
1
A:126-129
4
1.8
ENST00000358907
8
ENSE00001717201
chr12:
57691951-57691873
79
R3HD2_HUMAN
141-167
27
1
A:129-153 (gaps)
27
1.9
ENST00000358907
9
ENSE00001733477
chr12:
57691170-57691111
60
R3HD2_HUMAN
167-187
21
1
A:153-173
21
1.10b
ENST00000358907
10b
ENSE00001621494
chr12:
57690334-57690194
141
R3HD2_HUMAN
187-234
48
1
A:173-220
48
1.11a
ENST00000358907
11a
ENSE00001618758
chr12:
57689290-57689182
109
R3HD2_HUMAN
234-270
37
1
A:220-244
25
1.13
ENST00000358907
13
ENSE00001672243
chr12:
57682823-57682792
32
R3HD2_HUMAN
271-281
11
0
-
-
1.14
ENST00000358907
14
ENSE00001801990
chr12:
57682693-57682640
54
R3HD2_HUMAN
281-299
19
1
A:246-249
4
1.15
ENST00000358907
15
ENSE00001775362
chr12:
57677839-57677607
233
R3HD2_HUMAN
299-377
79
0
-
-
1.16a
ENST00000358907
16a
ENSE00001296391
chr12:
57674313-57674141
173
R3HD2_HUMAN
377-434
58
0
-
-
1.18
ENST00000358907
18
ENSE00001303911
chr12:
57663777-57663535
243
R3HD2_HUMAN
435-515
81
0
-
-
1.19b
ENST00000358907
19b
ENSE00001294786
chr12:
57663232-57663106
127
R3HD2_HUMAN
516-558
43
0
-
-
1.20
ENST00000358907
20
ENSE00001302752
chr12:
57662865-57662705
161
R3HD2_HUMAN
558-611
54
0
-
-
1.21
ENST00000358907
21
ENSE00001329647
chr12:
57662240-57662086
155
R3HD2_HUMAN
612-663
52
0
-
-
1.22
ENST00000358907
22
ENSE00001306016
chr12:
57660614-57660514
101
R3HD2_HUMAN
663-697
35
0
-
-
1.23
ENST00000358907
23
ENSE00001297380
chr12:
57652842-57652673
170
R3HD2_HUMAN
697-753
57
0
-
-
1.24
ENST00000358907
24
ENSE00001315769
chr12:
57651920-57651773
148
R3HD2_HUMAN
754-803
50
0
-
-
1.25
ENST00000358907
25
ENSE00001321877
chr12:
57650294-57650197
98
R3HD2_HUMAN
803-835
33
0
-
-
1.26
ENST00000358907
26
ENSE00001309387
chr12:
57649857-57649773
85
R3HD2_HUMAN
836-864
29
0
-
-
1.27c
ENST00000358907
27c
ENSE00001297406
chr12:
57648896-57647548
1349
R3HD2_HUMAN
864-976
113
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1whra_ (A:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IF3-like
(127)
Superfamily
:
R3H domain
(4)
Family
:
R3H domain
(4)
Protein domain
:
R3H domain protein KIAA1002
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1whra_
A:
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CATH Domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_R3H_1whrA01 (A:162-215)
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Clan
:
no clan defined [family: R3H]
(3)
Family
:
R3H
(3)
Homo sapiens (Human)
(2)
1a
R3H-1whrA01
A:162-215
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Chain A
Asymmetric Unit 1
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